RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
TARDBP-218ENST00000617172 CYP4F30PQ9H0H9 118 aa4.38□□□□□ -1.71
TARDBP-218ENST00000617172 ACYP1P07311 99 aa4.37□□□□□ -1.71
TARDBP-218ENST00000617172 Q5VV11 94 aa4.37□□□□□ -1.71
TARDBP-218ENST00000617172 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
TARDBP-218ENST00000617172 TRAV22A0A0B4J277 110 aa4.35□□□□□ -1.71
TARDBP-218ENST00000617172 LOC101927531A0A1B0GV80 90 aa4.35□□□□□ -1.71
TARDBP-218ENST00000617172 A6NN06 94 aa4.35□□□□□ -1.71
TARDBP-218ENST00000617172 KLKP1Q107X0 134 aa4.35□□□□□ -1.71
TARDBP-218ENST00000617172 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
TARDBP-218ENST00000617172 MT1BP07438 61 aa4.33□□□□□ -1.72
TARDBP-218ENST00000617172 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
TARDBP-218ENST00000617172 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
TARDBP-218ENST00000617172 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
TARDBP-218ENST00000617172 PCP4L1A6NKN8 68 aa4.31□□□□□ -1.72
TARDBP-218ENST00000617172 ATOX1O00244 68 aa4.31□□□□□ -1.72
TARDBP-218ENST00000617172 UQCRQO14949 82 aa4.31□□□□□ -1.72
TARDBP-218ENST00000617172 IMUPQ9GZP8 106 aa4.3□□□□□ -1.72
TARDBP-218ENST00000617172 HIST1H4AP62805 103 aaKnown RBP4.29□□□□□ -1.72
TARDBP-218ENST00000617172 NDUFC1O43677 76 aa4.28□□□□□ -1.72
TARDBP-218ENST00000617172 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
TARDBP-218ENST00000617172 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
TARDBP-218ENST00000617172 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
TARDBP-218ENST00000617172 A0A087WVE0 104 aa4.26□□□□□ -1.73
TARDBP-218ENST00000617172 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
TARDBP-218ENST00000617172 H0Y9P7 68 aa4.26□□□□□ -1.73
TARDBP-218ENST00000617172 H0YAA0 97 aa4.26□□□□□ -1.73
TARDBP-218ENST00000617172 A8MUN3 132 aa4.25□□□□□ -1.73
TARDBP-218ENST00000617172 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
TARDBP-218ENST00000617172 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
TARDBP-218ENST00000617172 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
TARDBP-218ENST00000617172 MP68P56378 58 aa4.19□□□□□ -1.74
TARDBP-218ENST00000617172 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
TARDBP-218ENST00000617172 OCR1Q9BZK8 76 aa4.16□□□□□ -1.74
TARDBP-218ENST00000617172 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
TARDBP-218ENST00000617172 PCP4P48539 62 aa4.15□□□□□ -1.75
TARDBP-218ENST00000617172 H3BPC8 53 aa4.14□□□□□ -1.75
TARDBP-218ENST00000617172 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
TARDBP-218ENST00000617172 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
TARDBP-218ENST00000617172 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
TARDBP-218ENST00000617172 J3QR89 54 aa4.11□□□□□ -1.75
TARDBP-218ENST00000617172 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
TARDBP-218ENST00000617172 R4GN34 69 aa4.1□□□□□ -1.75
TARDBP-218ENST00000617172 SCGB1A1P11684 91 aa4.09□□□□□ -1.75
TARDBP-218ENST00000617172 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
TARDBP-218ENST00000617172 DMAC1Q96GE9 116 aa4.08□□□□□ -1.76
TARDBP-218ENST00000617172 NEBP20929 6669 aa4.06□□□□□ -1.76
TARDBP-218ENST00000617172 A0A1B0GV90 55 aa4.06□□□□□ -1.76
TARDBP-218ENST00000617172 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
TARDBP-218ENST00000617172 P0C880 135 aa4.05□□□□□ -1.76
TARDBP-218ENST00000617172 MT1XP80297 61 aa4.05□□□□□ -1.76
TARDBP-218ENST00000617172 M0QZ58 72 aa4.04□□□□□ -1.76
TARDBP-218ENST00000617172 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
TARDBP-218ENST00000617172 KMT2DO14686 5537 aa4.02□□□□□ -1.77
TARDBP-218ENST00000617172 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
TARDBP-218ENST00000617172 ACYP2P14621 99 aa4□□□□□ -1.77
TARDBP-218ENST00000617172 KRTAP12-2P59991 146 aa4□□□□□ -1.77
TARDBP-218ENST00000617172 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
TARDBP-218ENST00000617172 SPTSSBQ8NFR3 76 aa3.99□□□□□ -1.77
TARDBP-218ENST00000617172 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
TARDBP-218ENST00000617172 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
TARDBP-218ENST00000617172 SMIM20Q8N5G0 67 aa3.98□□□□□ -1.77
TARDBP-218ENST00000617172 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
TARDBP-218ENST00000617172 SPRR2EP22531 72 aa3.96□□□□□ -1.78
TARDBP-218ENST00000617172 SPRR2BP35325 72 aa3.96□□□□□ -1.78
TARDBP-218ENST00000617172 SPRR2AP35326 72 aa3.96□□□□□ -1.78
TARDBP-218ENST00000617172 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
TARDBP-218ENST00000617172 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
TARDBP-218ENST00000617172 MT-ATP8P03928 68 aa3.92□□□□□ -1.78
TARDBP-218ENST00000617172 CHKB-CPT1BH3BT56 60 aa3.91□□□□□ -1.78
TARDBP-218ENST00000617172 SEC61GP60059 68 aa3.91□□□□□ -1.78
TARDBP-218ENST00000617172 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
TARDBP-218ENST00000617172 K7ERU9 68 aa3.89□□□□□ -1.79
TARDBP-218ENST00000617172 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
TARDBP-218ENST00000617172 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
TARDBP-218ENST00000617172 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
TARDBP-218ENST00000617172 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
TARDBP-218ENST00000617172 SPANXA2-OT1Q8N9U9 137 aa3.85□□□□□ -1.79
TARDBP-218ENST00000617172 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
TARDBP-218ENST00000617172 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
TARDBP-218ENST00000617172 SPRR2DP22532 72 aa3.84□□□□□ -1.79
TARDBP-218ENST00000617172 SNURFQ9Y675 71 aa3.83□□□□□ -1.8
TARDBP-218ENST00000617172 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
TARDBP-218ENST00000617172 CAMK2N1Q7Z7J9 78 aa3.76□□□□□ -1.81
TARDBP-218ENST00000617172 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
TARDBP-218ENST00000617172 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
TARDBP-218ENST00000617172 SERP1Q9Y6X1 66 aa3.72□□□□□ -1.81
TARDBP-218ENST00000617172 V9GYY9 64 aa3.72□□□□□ -1.81
TARDBP-218ENST00000617172 COA5Q86WW8 74 aa3.71□□□□□ -1.82
TARDBP-218ENST00000617172 A0A0D9SG42 100 aa3.64□□□□□ -1.83
TARDBP-218ENST00000617172 A0A1B0GU33 70 aa3.64□□□□□ -1.83
TARDBP-218ENST00000617172 COX7CP15954 63 aa3.63□□□□□ -1.83
TARDBP-218ENST00000617172 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
TARDBP-218ENST00000617172 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
TARDBP-218ENST00000617172 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
TARDBP-218ENST00000617172 MT1EP04732 61 aa3.6□□□□□ -1.83
TARDBP-218ENST00000617172 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
TARDBP-218ENST00000617172 H7BZZ5 65 aa3.58□□□□□ -1.84
TARDBP-218ENST00000617172 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
TARDBP-218ENST00000617172 SMIM26A0A096LP01 95 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms