RNA–Protein interactions for RNA: ENST00000616923.4

GCLC-213, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene GCLC, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-213ENST00000616923 Q5VSD8 79 aa8.2□□□□□ -1.1
GCLC-213ENST00000616923 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
GCLC-213ENST00000616923 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
GCLC-213ENST00000616923 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
GCLC-213ENST00000616923 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.1
GCLC-213ENST00000616923 KRTAP10-8P60410 259 aa8.12□□□□□ -1.11
GCLC-213ENST00000616923 MYCBP2O75592 4640 aa8.07□□□□□ -1.12
GCLC-213ENST00000616923 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
GCLC-213ENST00000616923 PKHD1P08F94 4074 aa8.05□□□□□ -1.12
GCLC-213ENST00000616923 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
GCLC-213ENST00000616923 A0A1B0GVY2 172 aa8□□□□□ -1.13
GCLC-213ENST00000616923 J3QL48 77 aa8□□□□□ -1.13
GCLC-213ENST00000616923 KRTAP21-3Q3LHN1 58 aa7.97□□□□□ -1.13
GCLC-213ENST00000616923 DYNC1H1Q14204 4646 aaKnown RBP7.97□□□□□ -1.13
GCLC-213ENST00000616923 PKD1P98161 4303 aa7.95□□□□□ -1.14
GCLC-213ENST00000616923 XP32Q5T750 250 aa7.93□□□□□ -1.14
GCLC-213ENST00000616923 M0QZ58 72 aa7.91□□□□□ -1.14
GCLC-213ENST00000616923 PLAC4Q8WY50 150 aa7.9□□□□□ -1.14
GCLC-213ENST00000616923 SACSQ9NZJ4 4579 aa7.87□□□□□ -1.15
GCLC-213ENST00000616923 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
GCLC-213ENST00000616923 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
GCLC-213ENST00000616923 R4GN34 69 aa7.84□□□□□ -1.15
GCLC-213ENST00000616923 APOBP04114 4563 aaKnown RBP7.82□□□□□ -1.16
GCLC-213ENST00000616923 LRP1Q07954 4544 aaKnown RBP7.81□□□□□ -1.16
GCLC-213ENST00000616923 HSPG2P98160 4391 aa7.81□□□□□ -1.16
GCLC-213ENST00000616923 KMT2CQ8NEZ4 4911 aaKnown RBP7.77□□□□□ -1.17
GCLC-213ENST00000616923 KIAA1109Q2LD37 5005 aa7.76□□□□□ -1.17
GCLC-213ENST00000616923 RYR1P21817 5038 aa7.66□□□□□ -1.18
GCLC-213ENST00000616923 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
GCLC-213ENST00000616923 LPAP08519 4548 aa7.63□□□□□ -1.19
GCLC-213ENST00000616923 RYR2Q92736 4967 aa7.6□□□□□ -1.19
GCLC-213ENST00000616923 RYR3Q15413 4870 aa7.57□□□□□ -1.2
GCLC-213ENST00000616923 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
GCLC-213ENST00000616923 KRTAP17-1Q9BYP8 105 aa7.55□□□□□ -1.2
GCLC-213ENST00000616923 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
GCLC-213ENST00000616923 LRP2P98164 4655 aa7.53□□□□□ -1.2
GCLC-213ENST00000616923 MT1HL1P0DM35 61 aa7.52□□□□□ -1.21
GCLC-213ENST00000616923 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
GCLC-213ENST00000616923 M0R2T5 61 aa7.48□□□□□ -1.21
GCLC-213ENST00000616923 SEC61BP60468 96 aaKnown RBP7.45□□□□□ -1.22
GCLC-213ENST00000616923 TNXBP22105 4242 aa7.33□□□□□ -1.24
GCLC-213ENST00000616923 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
GCLC-213ENST00000616923 EPPK1P58107 5090 aaKnown RBP7.25□□□□□ -1.25
GCLC-213ENST00000616923 TNP1P09430 55 aa7.17□□□□□ -1.26
GCLC-213ENST00000616923 ABCA13Q86UQ4 5058 aa7.14□□□□□ -1.27
GCLC-213ENST00000616923 MUC2Q02817 5179 aa7.12□□□□□ -1.27
GCLC-213ENST00000616923 KRTAP4-1Q9BYQ7 146 aa7.05□□□□□ -1.28
GCLC-213ENST00000616923 HERC2O95714 4834 aa7.04□□□□□ -1.28
GCLC-213ENST00000616923 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
GCLC-213ENST00000616923 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
GCLC-213ENST00000616923 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
GCLC-213ENST00000616923 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
GCLC-213ENST00000616923 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
GCLC-213ENST00000616923 HERC1Q15751 4861 aa6.8□□□□□ -1.32
GCLC-213ENST00000616923 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
GCLC-213ENST00000616923 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
GCLC-213ENST00000616923 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
GCLC-213ENST00000616923 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
GCLC-213ENST00000616923 KRTAP19-2Q3LHN2 52 aa6.58□□□□□ -1.36
GCLC-213ENST00000616923 UBR4Q5T4S7 5183 aa6.58□□□□□ -1.36
GCLC-213ENST00000616923 BIRC6Q9NR09 4857 aa6.57□□□□□ -1.36
GCLC-213ENST00000616923 INE1O15225 51 aa6.57□□□□□ -1.36
GCLC-213ENST00000616923 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
GCLC-213ENST00000616923 FLGP20930 4061 aaPredicted RBP6.42□□□□□ -1.38
GCLC-213ENST00000616923 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
GCLC-213ENST00000616923 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
GCLC-213ENST00000616923 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
GCLC-213ENST00000616923 MT1HP80294 61 aa6.34□□□□□ -1.4
GCLC-213ENST00000616923 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
GCLC-213ENST00000616923 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
GCLC-213ENST00000616923 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
GCLC-213ENST00000616923 MT1FP04733 61 aa6.27□□□□□ -1.41
GCLC-213ENST00000616923 MT2AP02795 61 aa6.25□□□□□ -1.41
GCLC-213ENST00000616923 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
GCLC-213ENST00000616923 USH2AO75445 5202 aa6.17□□□□□ -1.42
GCLC-213ENST00000616923 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
GCLC-213ENST00000616923 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
GCLC-213ENST00000616923 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
GCLC-213ENST00000616923 MT1XP80297 61 aa6.05□□□□□ -1.44
GCLC-213ENST00000616923 KMT2DO14686 5537 aa5.98□□□□□ -1.45
GCLC-213ENST00000616923 OBSCNQ5VST9 7968 aa5.95□□□□□ -1.46
GCLC-213ENST00000616923 MT1BP07438 61 aa5.95□□□□□ -1.46
GCLC-213ENST00000616923 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
GCLC-213ENST00000616923 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.46
GCLC-213ENST00000616923 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
GCLC-213ENST00000616923 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
GCLC-213ENST00000616923 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
GCLC-213ENST00000616923 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
GCLC-213ENST00000616923 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
GCLC-213ENST00000616923 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
GCLC-213ENST00000616923 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
GCLC-213ENST00000616923 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
GCLC-213ENST00000616923 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
GCLC-213ENST00000616923 LCE2BO14633 110 aa5.69□□□□□ -1.5
GCLC-213ENST00000616923 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
GCLC-213ENST00000616923 KRTAP2-3P0C7H8 128 aa5.53□□□□□ -1.52
GCLC-213ENST00000616923 KRTAP2-4Q9BYR9 128 aa5.53□□□□□ -1.52
GCLC-213ENST00000616923 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
GCLC-213ENST00000616923 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
GCLC-213ENST00000616923 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms