RNA–Protein interactions for RNA: ENST00000616566.4

PGM3-215, Transcript of phosphoglucomutase 3, humanhuman

TSL 2 BASIC

Gene PGM3, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-215ENST00000616566 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
PGM3-215ENST00000616566 XP32Q5T750 250 aa3.26□□□□□ -1.89
PGM3-215ENST00000616566 PKHD1P08F94 4074 aa3.25□□□□□ -1.89
PGM3-215ENST00000616566 P0C880 135 aa3.25□□□□□ -1.89
PGM3-215ENST00000616566 KRTAP10-8P60410 259 aa3.25□□□□□ -1.89
PGM3-215ENST00000616566 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
PGM3-215ENST00000616566 KRTAP3-3Q9BYR6 98 aa3.23□□□□□ -1.89
PGM3-215ENST00000616566 KRTAP3-2Q9BYR7 98 aa3.21□□□□□ -1.89
PGM3-215ENST00000616566 TPRXLQ17RH7 258 aa3.2□□□□□ -1.9
PGM3-215ENST00000616566 MYCBP2O75592 4640 aa3.19□□□□□ -1.9
PGM3-215ENST00000616566 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
PGM3-215ENST00000616566 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
PGM3-215ENST00000616566 KRTAP21-3Q3LHN1 58 aa3.17□□□□□ -1.9
PGM3-215ENST00000616566 LRP1Q07954 4544 aaKnown RBP3.17□□□□□ -1.9
PGM3-215ENST00000616566 M0QZ58 72 aa3.14□□□□□ -1.91
PGM3-215ENST00000616566 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
PGM3-215ENST00000616566 FAT3Q8TDW7 4589 aa3.14□□□□□ -1.91
PGM3-215ENST00000616566 PKHD1L1Q86WI1 4243 aa3.14□□□□□ -1.91
PGM3-215ENST00000616566 R4GN34 69 aa3.13□□□□□ -1.91
PGM3-215ENST00000616566 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
PGM3-215ENST00000616566 RYR2Q92736 4967 aa3.1□□□□□ -1.91
PGM3-215ENST00000616566 MT1HL1P0DM35 61 aa3.09□□□□□ -1.91
PGM3-215ENST00000616566 HSPG2P98160 4391 aa3.08□□□□□ -1.92
PGM3-215ENST00000616566 KRTAP17-1Q9BYP8 105 aa3.08□□□□□ -1.92
PGM3-215ENST00000616566 KIAA1109Q2LD37 5005 aa3.07□□□□□ -1.92
PGM3-215ENST00000616566 KMT2CQ8NEZ4 4911 aaKnown RBP3.06□□□□□ -1.92
PGM3-215ENST00000616566 SEC61BP60468 96 aaKnown RBP3.04□□□□□ -1.92
PGM3-215ENST00000616566 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
PGM3-215ENST00000616566 RYR1P21817 5038 aa3.04□□□□□ -1.92
PGM3-215ENST00000616566 TNXBP22105 4242 aa3.03□□□□□ -1.92
PGM3-215ENST00000616566 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
PGM3-215ENST00000616566 J3QL48 77 aa3.02□□□□□ -1.93
PGM3-215ENST00000616566 RYR3Q15413 4870 aa3.02□□□□□ -1.93
PGM3-215ENST00000616566 LRP2P98164 4655 aa3.02□□□□□ -1.93
PGM3-215ENST00000616566 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
PGM3-215ENST00000616566 LORP23490 312 aaPredicted RBP2.97□□□□□ -1.93
PGM3-215ENST00000616566 KRTAP4-5Q9BYR2 181 aa2.95□□□□□ -1.94
PGM3-215ENST00000616566 LPAP08519 4548 aa2.94□□□□□ -1.94
PGM3-215ENST00000616566 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
PGM3-215ENST00000616566 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.94
PGM3-215ENST00000616566 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
PGM3-215ENST00000616566 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
PGM3-215ENST00000616566 TNP1P09430 55 aa2.86□□□□□ -1.95
PGM3-215ENST00000616566 EPPK1P58107 5090 aaKnown RBP2.85□□□□□ -1.95
PGM3-215ENST00000616566 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
PGM3-215ENST00000616566 M0R2T5 61 aa2.81□□□□□ -1.96
PGM3-215ENST00000616566 HERC2O95714 4834 aa2.79□□□□□ -1.96
PGM3-215ENST00000616566 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
PGM3-215ENST00000616566 MUC17Q685J3 4493 aa2.76□□□□□ -1.97
PGM3-215ENST00000616566 MUC2Q02817 5179 aa2.73□□□□□ -1.97
PGM3-215ENST00000616566 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
PGM3-215ENST00000616566 KRTAP23-1A1A580 65 aa2.69□□□□□ -1.98
PGM3-215ENST00000616566 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
PGM3-215ENST00000616566 BIRC6Q9NR09 4857 aa2.66□□□□□ -1.98
PGM3-215ENST00000616566 LCE2DQ5TA82 110 aaPredicted RBP2.65□□□□□ -1.98
PGM3-215ENST00000616566 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
PGM3-215ENST00000616566 HERC1Q15751 4861 aa2.64□□□□□ -1.99
PGM3-215ENST00000616566 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
PGM3-215ENST00000616566 FAT4Q6V0I7 4981 aa2.63□□□□□ -1.99
PGM3-215ENST00000616566 KRTAP19-1Q8IUB9 90 aa2.63□□□□□ -1.99
PGM3-215ENST00000616566 LCE2CQ5TA81 110 aa2.61□□□□□ -1.99
PGM3-215ENST00000616566 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
PGM3-215ENST00000616566 PCLOQ9Y6V0 5065 aa2.59□□□□□ -1.99
PGM3-215ENST00000616566 MT1HP80294 61 aa2.59□□□□□ -2
PGM3-215ENST00000616566 MT1FP04733 61 aa2.58□□□□□ -2
PGM3-215ENST00000616566 MT2AP02795 61 aa2.58□□□□□ -2
PGM3-215ENST00000616566 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
PGM3-215ENST00000616566 RNF213Q63HN8 5207 aa2.55□□□□□ -2
PGM3-215ENST00000616566 KRTAP10-12P60413 245 aa2.54□□□□□ -2
PGM3-215ENST00000616566 KRTAP12-3P60328 96 aa2.53□□□□□ -2
PGM3-215ENST00000616566 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
PGM3-215ENST00000616566 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
PGM3-215ENST00000616566 KRTAP9-8Q9BYQ0 159 aa2.51□□□□□ -2.01
PGM3-215ENST00000616566 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
PGM3-215ENST00000616566 MT1BP07438 61 aa2.49□□□□□ -2.01
PGM3-215ENST00000616566 MT1XP80297 61 aa2.49□□□□□ -2.01
PGM3-215ENST00000616566 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
PGM3-215ENST00000616566 KRTAP10-5P60370 271 aa2.49□□□□□ -2.01
PGM3-215ENST00000616566 KRTAP10-7P60409 375 aaPredicted RBP2.46□□□□□ -2.02
PGM3-215ENST00000616566 INE1O15225 51 aa2.44□□□□□ -2.02
PGM3-215ENST00000616566 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
PGM3-215ENST00000616566 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
PGM3-215ENST00000616566 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
PGM3-215ENST00000616566 KRTAP4-8A0A0G2JLE6 195 aa2.31□□□□□ -2.04
PGM3-215ENST00000616566 LCE2BO14633 110 aa2.31□□□□□ -2.04
PGM3-215ENST00000616566 KRTAP4-8Q9BYQ9 185 aa2.31□□□□□ -2.04
PGM3-215ENST00000616566 USH2AO75445 5202 aa2.3□□□□□ -2.04
PGM3-215ENST00000616566 KMT2DO14686 5537 aa2.28□□□□□ -2.04
PGM3-215ENST00000616566 KRTAP4-7Q9BYR0 210 aa2.25□□□□□ -2.05
PGM3-215ENST00000616566 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
PGM3-215ENST00000616566 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
PGM3-215ENST00000616566 MT1LQ93083 61 aa2.17□□□□□ -2.06
PGM3-215ENST00000616566 LCE2AQ5TA79 106 aaPredicted RBP2.17□□□□□ -2.06
PGM3-215ENST00000616566 CRCT1Q9UGL9 99 aa2.16□□□□□ -2.06
PGM3-215ENST00000616566 MT1EP04732 61 aa2.15□□□□□ -2.06
PGM3-215ENST00000616566 KRTAP2-3P0C7H8 128 aa2.15□□□□□ -2.06
PGM3-215ENST00000616566 KRTAP2-4Q9BYR9 128 aa2.15□□□□□ -2.06
PGM3-215ENST00000616566 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.06
PGM3-215ENST00000616566 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
PGM3-215ENST00000616566 KRTAP19-4Q3LI73 84 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms