RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
MCM3-207ENST00000616552 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
MCM3-207ENST00000616552 DYNC1H1Q14204 4646 aaKnown RBP5.01□□□□□ -1.61
MCM3-207ENST00000616552 HSPG2P98160 4391 aa5□□□□□ -1.61
MCM3-207ENST00000616552 TPRXLQ17RH7 258 aa4.98□□□□□ -1.61
MCM3-207ENST00000616552 LPAP08519 4548 aa4.97□□□□□ -1.61
MCM3-207ENST00000616552 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.62
MCM3-207ENST00000616552 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
MCM3-207ENST00000616552 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
MCM3-207ENST00000616552 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
MCM3-207ENST00000616552 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
MCM3-207ENST00000616552 K7ERS5 55 aa4.91□□□□□ -1.62
MCM3-207ENST00000616552 PKHD1L1Q86WI1 4243 aa4.91□□□□□ -1.62
MCM3-207ENST00000616552 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
MCM3-207ENST00000616552 KRTAP10-8P60410 259 aa4.89□□□□□ -1.63
MCM3-207ENST00000616552 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
MCM3-207ENST00000616552 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
MCM3-207ENST00000616552 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
MCM3-207ENST00000616552 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
MCM3-207ENST00000616552 KRTAP12-2P59991 146 aa4.85□□□□□ -1.63
MCM3-207ENST00000616552 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
MCM3-207ENST00000616552 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
MCM3-207ENST00000616552 LRP2P98164 4655 aa4.8□□□□□ -1.64
MCM3-207ENST00000616552 RYR1P21817 5038 aa4.79□□□□□ -1.64
MCM3-207ENST00000616552 S4R3F8 94 aa4.78□□□□□ -1.64
MCM3-207ENST00000616552 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
MCM3-207ENST00000616552 KRTAP10-4P60372 401 aaPredicted RBP4.75□□□□□ -1.65
MCM3-207ENST00000616552 TNXBP22105 4242 aa4.74□□□□□ -1.65
MCM3-207ENST00000616552 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
MCM3-207ENST00000616552 KRTAP17-1Q9BYP8 105 aa4.7□□□□□ -1.66
MCM3-207ENST00000616552 MUC2Q02817 5179 aa4.69□□□□□ -1.66
MCM3-207ENST00000616552 HERC2O95714 4834 aa4.69□□□□□ -1.66
MCM3-207ENST00000616552 XP32Q5T750 250 aa4.67□□□□□ -1.66
MCM3-207ENST00000616552 Q5VSD8 79 aa4.64□□□□□ -1.67
MCM3-207ENST00000616552 KRTAP4-5Q9BYR2 181 aa4.64□□□□□ -1.67
MCM3-207ENST00000616552 ABCA13Q86UQ4 5058 aa4.64□□□□□ -1.67
MCM3-207ENST00000616552 PCLOQ9Y6V0 5065 aa4.58□□□□□ -1.68
MCM3-207ENST00000616552 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
MCM3-207ENST00000616552 M0QZ58 72 aa4.54□□□□□ -1.68
MCM3-207ENST00000616552 R4GN34 69 aa4.47□□□□□ -1.69
MCM3-207ENST00000616552 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
MCM3-207ENST00000616552 HERC1Q15751 4861 aa4.46□□□□□ -1.7
MCM3-207ENST00000616552 J3QL48 77 aa4.44□□□□□ -1.7
MCM3-207ENST00000616552 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
MCM3-207ENST00000616552 MT1HL1P0DM35 61 aa4.41□□□□□ -1.7
MCM3-207ENST00000616552 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
MCM3-207ENST00000616552 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
MCM3-207ENST00000616552 RNF213Q63HN8 5207 aa4.34□□□□□ -1.71
MCM3-207ENST00000616552 PP632Q6XCG6 107 aa4.34□□□□□ -1.72
MCM3-207ENST00000616552 MUC17Q685J3 4493 aa4.34□□□□□ -1.72
MCM3-207ENST00000616552 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
MCM3-207ENST00000616552 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
MCM3-207ENST00000616552 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
MCM3-207ENST00000616552 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
MCM3-207ENST00000616552 UBR4Q5T4S7 5183 aa4.19□□□□□ -1.74
MCM3-207ENST00000616552 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
MCM3-207ENST00000616552 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
MCM3-207ENST00000616552 M0R2T5 61 aa4.07□□□□□ -1.76
MCM3-207ENST00000616552 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
MCM3-207ENST00000616552 TNP1P09430 55 aa4.05□□□□□ -1.76
MCM3-207ENST00000616552 USH2AO75445 5202 aa4.01□□□□□ -1.77
MCM3-207ENST00000616552 KMT2DO14686 5537 aa4□□□□□ -1.77
MCM3-207ENST00000616552 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
MCM3-207ENST00000616552 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
MCM3-207ENST00000616552 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
MCM3-207ENST00000616552 INE1O15225 51 aa3.88□□□□□ -1.79
MCM3-207ENST00000616552 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
MCM3-207ENST00000616552 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
MCM3-207ENST00000616552 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
MCM3-207ENST00000616552 LCE2CQ5TA81 110 aa3.8□□□□□ -1.8
MCM3-207ENST00000616552 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
MCM3-207ENST00000616552 MT1FP04733 61 aa3.75□□□□□ -1.81
MCM3-207ENST00000616552 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
MCM3-207ENST00000616552 MT1HP80294 61 aa3.74□□□□□ -1.81
MCM3-207ENST00000616552 LCE2AQ5TA79 106 aaPredicted RBP3.72□□□□□ -1.81
MCM3-207ENST00000616552 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
MCM3-207ENST00000616552 MT2AP02795 61 aa3.69□□□□□ -1.82
MCM3-207ENST00000616552 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
MCM3-207ENST00000616552 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
MCM3-207ENST00000616552 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
MCM3-207ENST00000616552 MT1XP80297 61 aa3.66□□□□□ -1.82
MCM3-207ENST00000616552 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
MCM3-207ENST00000616552 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
MCM3-207ENST00000616552 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
MCM3-207ENST00000616552 MT1BP07438 61 aa3.62□□□□□ -1.83
MCM3-207ENST00000616552 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
MCM3-207ENST00000616552 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
MCM3-207ENST00000616552 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
MCM3-207ENST00000616552 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
MCM3-207ENST00000616552 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
MCM3-207ENST00000616552 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
MCM3-207ENST00000616552 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
MCM3-207ENST00000616552 KRTAP9-2Q9BYQ4 174 aa3.49□□□□□ -1.85
MCM3-207ENST00000616552 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
MCM3-207ENST00000616552 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.86
MCM3-207ENST00000616552 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
MCM3-207ENST00000616552 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
MCM3-207ENST00000616552 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
MCM3-207ENST00000616552 KRTAP9-3Q9BYQ3 159 aa3.43□□□□□ -1.86
MCM3-207ENST00000616552 LCE2DQ5TA82 110 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms