RNA–Protein interactions for RNA: ENST00000614941.4

SYNRG-222, Transcript of synergin gamma, humanhuman

TSL 1 (best) BASIC

Gene SYNRG, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-222ENST00000614941 RYR2Q92736 4967 aa8.29□□□□□ -1.08
SYNRG-222ENST00000614941 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
SYNRG-222ENST00000614941 SMR3BP02814 79 aaPredicted RBP8.25□□□□□ -1.09
SYNRG-222ENST00000614941 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
SYNRG-222ENST00000614941 PKHD1P08F94 4074 aa8.23□□□□□ -1.09
SYNRG-222ENST00000614941 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.1
SYNRG-222ENST00000614941 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
SYNRG-222ENST00000614941 FAT1Q14517 4588 aa8.19□□□□□ -1.1
SYNRG-222ENST00000614941 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
SYNRG-222ENST00000614941 S4R3F8 94 aa8.17□□□□□ -1.1
SYNRG-222ENST00000614941 EPPK1P58107 5090 aaKnown RBP8.09□□□□□ -1.11
SYNRG-222ENST00000614941 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
SYNRG-222ENST00000614941 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
SYNRG-222ENST00000614941 PKHD1L1Q86WI1 4243 aa8.05□□□□□ -1.12
SYNRG-222ENST00000614941 DYNC1H1Q14204 4646 aaKnown RBP8.04□□□□□ -1.12
SYNRG-222ENST00000614941 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
SYNRG-222ENST00000614941 HSPG2P98160 4391 aa8□□□□□ -1.13
SYNRG-222ENST00000614941 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
SYNRG-222ENST00000614941 XP32Q5T750 250 aa7.93□□□□□ -1.14
SYNRG-222ENST00000614941 A0A0A0MQY5 61 aa7.93□□□□□ -1.14
SYNRG-222ENST00000614941 KRTAP10-4P60372 401 aaPredicted RBP7.91□□□□□ -1.14
SYNRG-222ENST00000614941 LRP1Q07954 4544 aaKnown RBP7.89□□□□□ -1.15
SYNRG-222ENST00000614941 BIRC6Q9NR09 4857 aa7.87□□□□□ -1.15
SYNRG-222ENST00000614941 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
SYNRG-222ENST00000614941 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
SYNRG-222ENST00000614941 KIAA1109Q2LD37 5005 aa7.78□□□□□ -1.16
SYNRG-222ENST00000614941 LPAP08519 4548 aa7.77□□□□□ -1.17
SYNRG-222ENST00000614941 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
SYNRG-222ENST00000614941 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
SYNRG-222ENST00000614941 M0QZ58 72 aa7.69□□□□□ -1.18
SYNRG-222ENST00000614941 TNXBP22105 4242 aa7.69□□□□□ -1.18
SYNRG-222ENST00000614941 RYR1P21817 5038 aa7.66□□□□□ -1.18
SYNRG-222ENST00000614941 HERC2O95714 4834 aa7.66□□□□□ -1.18
SYNRG-222ENST00000614941 LRP2P98164 4655 aa7.59□□□□□ -1.19
SYNRG-222ENST00000614941 R4GN34 69 aa7.58□□□□□ -1.2
SYNRG-222ENST00000614941 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
SYNRG-222ENST00000614941 PCLOQ9Y6V0 5065 aa7.57□□□□□ -1.2
SYNRG-222ENST00000614941 ABCA13Q86UQ4 5058 aa7.54□□□□□ -1.2
SYNRG-222ENST00000614941 KRTAP4-5Q9BYR2 181 aa7.49□□□□□ -1.21
SYNRG-222ENST00000614941 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
SYNRG-222ENST00000614941 Q5VSD8 79 aa7.46□□□□□ -1.22
SYNRG-222ENST00000614941 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
SYNRG-222ENST00000614941 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
SYNRG-222ENST00000614941 HERC1Q15751 4861 aa7.25□□□□□ -1.25
SYNRG-222ENST00000614941 PP632Q6XCG6 107 aa7.21□□□□□ -1.25
SYNRG-222ENST00000614941 J3QL48 77 aa7.05□□□□□ -1.28
SYNRG-222ENST00000614941 MUC17Q685J3 4493 aa7.04□□□□□ -1.28
SYNRG-222ENST00000614941 KRTAP4-1Q9BYQ7 146 aa7.02□□□□□ -1.29
SYNRG-222ENST00000614941 MUC2Q02817 5179 aa6.99□□□□□ -1.29
SYNRG-222ENST00000614941 TNP1P09430 55 aa6.98□□□□□ -1.29
SYNRG-222ENST00000614941 HMCN2Q8NDA2 5059 aa6.95□□□□□ -1.3
SYNRG-222ENST00000614941 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
SYNRG-222ENST00000614941 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
SYNRG-222ENST00000614941 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
SYNRG-222ENST00000614941 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
SYNRG-222ENST00000614941 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
SYNRG-222ENST00000614941 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
SYNRG-222ENST00000614941 RNF213Q63HN8 5207 aa6.69□□□□□ -1.34
SYNRG-222ENST00000614941 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
SYNRG-222ENST00000614941 LCE3AQ5TA76 89 aa6.63□□□□□ -1.35
SYNRG-222ENST00000614941 FAT4Q6V0I7 4981 aa6.61□□□□□ -1.35
SYNRG-222ENST00000614941 INE1O15225 51 aa6.48□□□□□ -1.37
SYNRG-222ENST00000614941 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
SYNRG-222ENST00000614941 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
SYNRG-222ENST00000614941 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
SYNRG-222ENST00000614941 M0R2T5 61 aa6.29□□□□□ -1.4
SYNRG-222ENST00000614941 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
SYNRG-222ENST00000614941 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
SYNRG-222ENST00000614941 KRTAP10-10P60014 251 aa6.19□□□□□ -1.42
SYNRG-222ENST00000614941 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
SYNRG-222ENST00000614941 MT1FP04733 61 aa6.16□□□□□ -1.42
SYNRG-222ENST00000614941 MT2AP02795 61 aa6.1□□□□□ -1.43
SYNRG-222ENST00000614941 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
SYNRG-222ENST00000614941 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.44
SYNRG-222ENST00000614941 MT1HP80294 61 aa6.08□□□□□ -1.44
SYNRG-222ENST00000614941 MT1XP80297 61 aa6.08□□□□□ -1.44
SYNRG-222ENST00000614941 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
SYNRG-222ENST00000614941 MT1BP07438 61 aa6.01□□□□□ -1.45
SYNRG-222ENST00000614941 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
SYNRG-222ENST00000614941 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
SYNRG-222ENST00000614941 KMT2DO14686 5537 aa5.96□□□□□ -1.45
SYNRG-222ENST00000614941 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
SYNRG-222ENST00000614941 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
SYNRG-222ENST00000614941 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
SYNRG-222ENST00000614941 KRTAP9-2Q9BYQ4 174 aa5.81□□□□□ -1.48
SYNRG-222ENST00000614941 USH2AO75445 5202 aa5.81□□□□□ -1.48
SYNRG-222ENST00000614941 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
SYNRG-222ENST00000614941 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
SYNRG-222ENST00000614941 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
SYNRG-222ENST00000614941 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
SYNRG-222ENST00000614941 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.5
SYNRG-222ENST00000614941 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
SYNRG-222ENST00000614941 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
SYNRG-222ENST00000614941 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
SYNRG-222ENST00000614941 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
SYNRG-222ENST00000614941 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
SYNRG-222ENST00000614941 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
SYNRG-222ENST00000614941 LCE2BO14633 110 aa5.48□□□□□ -1.53
SYNRG-222ENST00000614941 SSPOA2VEC9 5147 aa5.45□□□□□ -1.54
SYNRG-222ENST00000614941 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms