RNA–Protein interactions for RNA: ENST00000613129.4

SURF4-208, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,148 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-208ENST00000613129 TPRXLQ17RH7 258 aa8.65□□□□□ -1.03
SURF4-208ENST00000613129 APOBP04114 4563 aaKnown RBP8.63□□□□□ -1.03
SURF4-208ENST00000613129 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
SURF4-208ENST00000613129 RPL37P61927 97 aaKnown RBP8.6□□□□□ -1.03
SURF4-208ENST00000613129 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
SURF4-208ENST00000613129 KRTAP10-8P60410 259 aa8.56□□□□□ -1.04
SURF4-208ENST00000613129 PKHD1L1Q86WI1 4243 aa8.55□□□□□ -1.04
SURF4-208ENST00000613129 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
SURF4-208ENST00000613129 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
SURF4-208ENST00000613129 LPAP08519 4548 aa8.49□□□□□ -1.05
SURF4-208ENST00000613129 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
SURF4-208ENST00000613129 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
SURF4-208ENST00000613129 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
SURF4-208ENST00000613129 KRTAP10-4P60372 401 aaPredicted RBP8.41□□□□□ -1.06
SURF4-208ENST00000613129 S4R3F8 94 aa8.41□□□□□ -1.06
SURF4-208ENST00000613129 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
SURF4-208ENST00000613129 TNXBP22105 4242 aa8.3□□□□□ -1.08
SURF4-208ENST00000613129 LRP2P98164 4655 aa8.29□□□□□ -1.08
SURF4-208ENST00000613129 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
SURF4-208ENST00000613129 A0A0A0MQY5 61 aa8.27□□□□□ -1.09
SURF4-208ENST00000613129 XP32Q5T750 250 aa8.27□□□□□ -1.09
SURF4-208ENST00000613129 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
SURF4-208ENST00000613129 KRTAP21-3Q3LHN1 58 aa8.24□□□□□ -1.09
SURF4-208ENST00000613129 A0A1B0GVY2 172 aa8.2□□□□□ -1.1
SURF4-208ENST00000613129 RYR2Q92736 4967 aa8.12□□□□□ -1.11
SURF4-208ENST00000613129 RYR1P21817 5038 aa8.09□□□□□ -1.11
SURF4-208ENST00000613129 Q5VSD8 79 aa8.07□□□□□ -1.12
SURF4-208ENST00000613129 J3QL48 77 aa8.05□□□□□ -1.12
SURF4-208ENST00000613129 KRTAP17-1Q9BYP8 105 aa8.05□□□□□ -1.12
SURF4-208ENST00000613129 KIAA1109Q2LD37 5005 aa8.04□□□□□ -1.12
SURF4-208ENST00000613129 M0QZ58 72 aa8.03□□□□□ -1.12
SURF4-208ENST00000613129 RYR3Q15413 4870 aa8.02□□□□□ -1.13
SURF4-208ENST00000613129 ABCA13Q86UQ4 5058 aa7.94□□□□□ -1.14
SURF4-208ENST00000613129 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
SURF4-208ENST00000613129 R4GN34 69 aa7.93□□□□□ -1.14
SURF4-208ENST00000613129 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
SURF4-208ENST00000613129 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
SURF4-208ENST00000613129 EPPK1P58107 5090 aaKnown RBP7.78□□□□□ -1.16
SURF4-208ENST00000613129 MUC2Q02817 5179 aa7.75□□□□□ -1.17
SURF4-208ENST00000613129 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
SURF4-208ENST00000613129 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
SURF4-208ENST00000613129 LUZP6Q538Z0 58 aa7.58□□□□□ -1.2
SURF4-208ENST00000613129 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
SURF4-208ENST00000613129 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
SURF4-208ENST00000613129 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
SURF4-208ENST00000613129 HERC2O95714 4834 aa7.33□□□□□ -1.24
SURF4-208ENST00000613129 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
SURF4-208ENST00000613129 PCLOQ9Y6V0 5065 aa7.32□□□□□ -1.24
SURF4-208ENST00000613129 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
SURF4-208ENST00000613129 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
SURF4-208ENST00000613129 TNP1P09430 55 aa7.22□□□□□ -1.25
SURF4-208ENST00000613129 FLGP20930 4061 aaPredicted RBP7.15□□□□□ -1.27
SURF4-208ENST00000613129 HERC1Q15751 4861 aa7.13□□□□□ -1.27
SURF4-208ENST00000613129 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
SURF4-208ENST00000613129 RNF213Q63HN8 5207 aa7.01□□□□□ -1.29
SURF4-208ENST00000613129 HMCN2Q8NDA2 5059 aa6.96□□□□□ -1.3
SURF4-208ENST00000613129 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
SURF4-208ENST00000613129 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
SURF4-208ENST00000613129 M0R2T5 61 aa6.87□□□□□ -1.31
SURF4-208ENST00000613129 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
SURF4-208ENST00000613129 UBR4Q5T4S7 5183 aa6.79□□□□□ -1.32
SURF4-208ENST00000613129 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
SURF4-208ENST00000613129 LCE2CQ5TA81 110 aa6.72□□□□□ -1.33
SURF4-208ENST00000613129 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
SURF4-208ENST00000613129 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
SURF4-208ENST00000613129 MT1FP04733 61 aa6.63□□□□□ -1.35
SURF4-208ENST00000613129 KMT2DO14686 5537 aa6.56□□□□□ -1.36
SURF4-208ENST00000613129 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
SURF4-208ENST00000613129 MT2AP02795 61 aa6.54□□□□□ -1.36
SURF4-208ENST00000613129 MT1HP80294 61 aa6.54□□□□□ -1.36
SURF4-208ENST00000613129 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
SURF4-208ENST00000613129 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
SURF4-208ENST00000613129 USH2AO75445 5202 aa6.47□□□□□ -1.37
SURF4-208ENST00000613129 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
SURF4-208ENST00000613129 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
SURF4-208ENST00000613129 MT1XP80297 61 aa6.45□□□□□ -1.38
SURF4-208ENST00000613129 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
SURF4-208ENST00000613129 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
SURF4-208ENST00000613129 MT1BP07438 61 aa6.4□□□□□ -1.38
SURF4-208ENST00000613129 INE1O15225 51 aa6.34□□□□□ -1.39
SURF4-208ENST00000613129 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
SURF4-208ENST00000613129 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
SURF4-208ENST00000613129 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
SURF4-208ENST00000613129 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
SURF4-208ENST00000613129 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
SURF4-208ENST00000613129 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
SURF4-208ENST00000613129 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
SURF4-208ENST00000613129 KRTAP9-6A8MVA2 160 aa6.08□□□□□ -1.44
SURF4-208ENST00000613129 LCE2BO14633 110 aa5.94□□□□□ -1.46
SURF4-208ENST00000613129 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
SURF4-208ENST00000613129 LCE2DQ5TA82 110 aaPredicted RBP5.83□□□□□ -1.48
SURF4-208ENST00000613129 LCE2AQ5TA79 106 aaPredicted RBP5.75□□□□□ -1.49
SURF4-208ENST00000613129 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
SURF4-208ENST00000613129 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
SURF4-208ENST00000613129 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
SURF4-208ENST00000613129 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
SURF4-208ENST00000613129 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
SURF4-208ENST00000613129 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.51
SURF4-208ENST00000613129 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
SURF4-208ENST00000613129 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 405.2 ms