RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 R4GN34 69 aa2.66□□□□□ -1.98
HDDC2-208ENST00000609021 SACSQ9NZJ4 4579 aa2.65□□□□□ -1.99
HDDC2-208ENST00000609021 VPS13BQ7Z7G8 4022 aa2.65□□□□□ -1.99
HDDC2-208ENST00000609021 APLNQ9ULZ1 77 aa2.65□□□□□ -1.99
HDDC2-208ENST00000609021 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
HDDC2-208ENST00000609021 PRO2289Q9P1D8 64 aa2.64□□□□□ -1.99
HDDC2-208ENST00000609021 TYMSOSQ8TAI1 123 aa2.63□□□□□ -1.99
HDDC2-208ENST00000609021 Q8N1X5 172 aa2.63□□□□□ -1.99
HDDC2-208ENST00000609021 GIG44P09565 113 aaPredicted RBP2.63□□□□□ -1.99
HDDC2-208ENST00000609021 KRTAP24-1Q3LI83 254 aa2.62□□□□□ -1.99
HDDC2-208ENST00000609021 COX6B2Q6YFQ2 88 aa2.62□□□□□ -1.99
HDDC2-208ENST00000609021 MEGF8Q7Z7M0 2845 aa2.62□□□□□ -1.99
HDDC2-208ENST00000609021 A0A0D9SG42 100 aa2.62□□□□□ -1.99
HDDC2-208ENST00000609021 SMR3AQ99954 134 aa2.62□□□□□ -1.99
HDDC2-208ENST00000609021 FAT3Q8TDW7 4589 aa2.61□□□□□ -1.99
HDDC2-208ENST00000609021 SRRM2Q9UQ35 2752 aaKnown RBP2.61□□□□□ -1.99
HDDC2-208ENST00000609021 SPRR1BP22528 89 aa2.59□□□□□ -1.99
HDDC2-208ENST00000609021 RYR2Q92736 4967 aa2.58□□□□□ -2
HDDC2-208ENST00000609021 DEFB4AO15263 64 aa2.58□□□□□ -2
HDDC2-208ENST00000609021 WWC2-AS2Q96NR7 200 aa2.57□□□□□ -2
HDDC2-208ENST00000609021 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
HDDC2-208ENST00000609021 RYR3Q15413 4870 aa2.57□□□□□ -2
HDDC2-208ENST00000609021 STAB2Q8WWQ8 2551 aa2.57□□□□□ -2
HDDC2-208ENST00000609021 SPART-AS1P0CW21 52 aa2.56□□□□□ -2
HDDC2-208ENST00000609021 SPACA4Q8TDM5 124 aa2.56□□□□□ -2
HDDC2-208ENST00000609021 KMT2CQ8NEZ4 4911 aaKnown RBP2.55□□□□□ -2
HDDC2-208ENST00000609021 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2.01
HDDC2-208ENST00000609021 TENM3Q9P273 2699 aa2.53□□□□□ -2.01
HDDC2-208ENST00000609021 TENM2Q9NT68 2774 aa2.52□□□□□ -2.01
HDDC2-208ENST00000609021 DYNC1H1Q14204 4646 aaKnown RBP2.52□□□□□ -2.01
HDDC2-208ENST00000609021 NBEAL2Q6ZNJ1 2754 aa2.52□□□□□ -2.01
HDDC2-208ENST00000609021 DEFB135Q30KP9 77 aa2.52□□□□□ -2.01
HDDC2-208ENST00000609021 HSPG2P98160 4391 aa2.51□□□□□ -2.01
HDDC2-208ENST00000609021 KRTAP9-7A8MTY7 169 aa2.5□□□□□ -2.01
HDDC2-208ENST00000609021 Q6ZRN7 208 aaPredicted RBP2.5□□□□□ -2.01
HDDC2-208ENST00000609021 KRTAP7-1Q8IUC3 87 aa2.5□□□□□ -2.01
HDDC2-208ENST00000609021 KRTAP10-11P60412 298 aa2.49□□□□□ -2.01
HDDC2-208ENST00000609021 S4R3F8 94 aa2.49□□□□□ -2.01
HDDC2-208ENST00000609021 INE1O15225 51 aa2.48□□□□□ -2.01
HDDC2-208ENST00000609021 LINC01556Q5JQF7 62 aa2.48□□□□□ -2.01
HDDC2-208ENST00000609021 LRP1BQ9NZR2 4599 aa2.47□□□□□ -2.01
HDDC2-208ENST00000609021 TNXBP22105 4242 aa2.47□□□□□ -2.01
HDDC2-208ENST00000609021 TGP01266 2768 aa2.47□□□□□ -2.01
HDDC2-208ENST00000609021 H3BNG1 76 aa2.46□□□□□ -2.02
HDDC2-208ENST00000609021 PP632Q6XCG6 107 aa2.43□□□□□ -2.02
HDDC2-208ENST00000609021 EPPK1P58107 5090 aaKnown RBP2.41□□□□□ -2.02
HDDC2-208ENST00000609021 KRTAP10-8P60410 259 aa2.41□□□□□ -2.02
HDDC2-208ENST00000609021 FAT1Q14517 4588 aa2.4□□□□□ -2.03
HDDC2-208ENST00000609021 KRTAP10-2P60368 255 aa2.37□□□□□ -2.03
HDDC2-208ENST00000609021 KRTAP13-1Q8IUC0 172 aa2.37□□□□□ -2.03
HDDC2-208ENST00000609021 KRTAP12-2P59991 146 aa2.37□□□□□ -2.03
HDDC2-208ENST00000609021 LCE5AQ5TCM9 118 aa2.35□□□□□ -2.03
HDDC2-208ENST00000609021 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
HDDC2-208ENST00000609021 RYR1P21817 5038 aa2.34□□□□□ -2.03
HDDC2-208ENST00000609021 KRTAP9-3Q9BYQ3 159 aa2.34□□□□□ -2.03
HDDC2-208ENST00000609021 MYCBP2O75592 4640 aa2.33□□□□□ -2.04
HDDC2-208ENST00000609021 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
HDDC2-208ENST00000609021 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
HDDC2-208ENST00000609021 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
HDDC2-208ENST00000609021 KRTAP10-6P60371 365 aaPredicted RBP2.31□□□□□ -2.04
HDDC2-208ENST00000609021 KRTAP1-5Q9BYS1 174 aa2.31□□□□□ -2.04
HDDC2-208ENST00000609021 M0QZ58 72 aa2.3□□□□□ -2.04
HDDC2-208ENST00000609021 KRTAP19-4Q3LI73 84 aa2.3□□□□□ -2.04
HDDC2-208ENST00000609021 KRTAP3-1Q9BYR8 98 aa2.28□□□□□ -2.04
HDDC2-208ENST00000609021 LRP1Q07954 4544 aaKnown RBP2.26□□□□□ -2.05
HDDC2-208ENST00000609021 HERC2O95714 4834 aa2.26□□□□□ -2.05
HDDC2-208ENST00000609021 LPAP08519 4548 aa2.25□□□□□ -2.05
HDDC2-208ENST00000609021 MUC17Q685J3 4493 aa2.24□□□□□ -2.05
HDDC2-208ENST00000609021 BIRC6Q9NR09 4857 aa2.23□□□□□ -2.05
HDDC2-208ENST00000609021 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
HDDC2-208ENST00000609021 C9orf92A6NGG3 77 aa2.22□□□□□ -2.05
HDDC2-208ENST00000609021 A0A1B0GVY2 172 aa2.22□□□□□ -2.05
HDDC2-208ENST00000609021 PCLOQ9Y6V0 5065 aa2.21□□□□□ -2.06
HDDC2-208ENST00000609021 KIAA1109Q2LD37 5005 aa2.2□□□□□ -2.06
HDDC2-208ENST00000609021 Q5VSD8 79 aa2.18□□□□□ -2.06
HDDC2-208ENST00000609021 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
HDDC2-208ENST00000609021 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.06
HDDC2-208ENST00000609021 KRTAP13-2Q52LG2 175 aa2.14□□□□□ -2.07
HDDC2-208ENST00000609021 TNP1P09430 55 aa2.13□□□□□ -2.07
HDDC2-208ENST00000609021 SMR3BP02814 79 aaPredicted RBP2.12□□□□□ -2.07
HDDC2-208ENST00000609021 HMCN2Q8NDA2 5059 aa2.11□□□□□ -2.07
HDDC2-208ENST00000609021 RPS29P62273 56 aaKnown RBP2.09□□□□□ -2.07
HDDC2-208ENST00000609021 KRTAP1-4P0C5Y4 121 aa2.08□□□□□ -2.08
HDDC2-208ENST00000609021 KRTAP10-1P60331 282 aa2.08□□□□□ -2.08
HDDC2-208ENST00000609021 HERC1Q15751 4861 aa2.08□□□□□ -2.08
HDDC2-208ENST00000609021 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
HDDC2-208ENST00000609021 LRP2P98164 4655 aa2.07□□□□□ -2.08
HDDC2-208ENST00000609021 MT1HL1P0DM35 61 aa2.01□□□□□ -2.09
HDDC2-208ENST00000609021 MUC2Q02817 5179 aa2□□□□□ -2.09
HDDC2-208ENST00000609021 KRTAP19-2Q3LHN2 52 aa1.98□□□□□ -2.09
HDDC2-208ENST00000609021 RNF213Q63HN8 5207 aa1.93□□□□□ -2.1
HDDC2-208ENST00000609021 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
HDDC2-208ENST00000609021 KRTAP10-10P60014 251 aa1.93□□□□□ -2.1
HDDC2-208ENST00000609021 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
HDDC2-208ENST00000609021 FAT4Q6V0I7 4981 aa1.88□□□□□ -2.11
HDDC2-208ENST00000609021 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
HDDC2-208ENST00000609021 M0R2T5 61 aa1.86□□□□□ -2.11
HDDC2-208ENST00000609021 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
HDDC2-208ENST00000609021 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
HDDC2-208ENST00000609021 FSIP2Q5CZC0 6907 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms