RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 CSAG1Q6PB30 78 aa8.87□□□□□ -0.99
SGMS1-208ENST00000608287 ATOX1O00244 68 aa8.86□□□□□ -0.99
SGMS1-208ENST00000608287 J3QR89 54 aa8.85□□□□□ -0.99
SGMS1-208ENST00000608287 KRTAP5-9P26371 169 aa8.83□□□□□ -1
SGMS1-208ENST00000608287 FAM236AA0A1B0GUQ0 79 aa8.82□□□□□ -1
SGMS1-208ENST00000608287 FAM236BA0A1B0GV22 79 aa8.82□□□□□ -1
SGMS1-208ENST00000608287 KRTAP2-3P0C7H8 128 aa8.81□□□□□ -1
SGMS1-208ENST00000608287 KRTAP2-4Q9BYR9 128 aa8.81□□□□□ -1
SGMS1-208ENST00000608287 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
SGMS1-208ENST00000608287 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
SGMS1-208ENST00000608287 OCR1Q9BZK8 76 aa8.75□□□□□ -1.01
SGMS1-208ENST00000608287 MP68P56378 58 aa8.73□□□□□ -1.01
SGMS1-208ENST00000608287 MDN1Q9NU22 5596 aa8.71□□□□□ -1.02
SGMS1-208ENST00000608287 KMT2DO14686 5537 aa8.7□□□□□ -1.02
SGMS1-208ENST00000608287 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
SGMS1-208ENST00000608287 Q5VV11 94 aa8.66□□□□□ -1.02
SGMS1-208ENST00000608287 SCGB1A1P11684 91 aa8.65□□□□□ -1.02
SGMS1-208ENST00000608287 A8MUN3 132 aa8.64□□□□□ -1.03
SGMS1-208ENST00000608287 NDUFC1O43677 76 aa8.63□□□□□ -1.03
SGMS1-208ENST00000608287 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
SGMS1-208ENST00000608287 H3BPC8 53 aa8.59□□□□□ -1.03
SGMS1-208ENST00000608287 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
SGMS1-208ENST00000608287 IMUPQ9GZP8 106 aa8.58□□□□□ -1.04
SGMS1-208ENST00000608287 MT1BP07438 61 aa8.57□□□□□ -1.04
SGMS1-208ENST00000608287 K7ERU9 68 aa8.55□□□□□ -1.04
SGMS1-208ENST00000608287 MT-ATP8P03928 68 aa8.52□□□□□ -1.05
SGMS1-208ENST00000608287 KRTAP19-8Q3LI54 63 aa8.51□□□□□ -1.05
SGMS1-208ENST00000608287 CRIPTQ9P021 101 aa8.5□□□□□ -1.05
SGMS1-208ENST00000608287 H0YAA0 97 aa8.49□□□□□ -1.05
SGMS1-208ENST00000608287 KRTAP2-2Q9BYT5 123 aa8.49□□□□□ -1.05
SGMS1-208ENST00000608287 KRTAP2-1Q9BYU5 128 aa8.49□□□□□ -1.05
SGMS1-208ENST00000608287 SPRR2EP22531 72 aa8.45□□□□□ -1.06
SGMS1-208ENST00000608287 SPRR2BP35325 72 aa8.45□□□□□ -1.06
SGMS1-208ENST00000608287 SPRR2AP35326 72 aa8.45□□□□□ -1.06
SGMS1-208ENST00000608287 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
SGMS1-208ENST00000608287 DMAC1Q96GE9 116 aa8.43□□□□□ -1.06
SGMS1-208ENST00000608287 SMIM20Q8N5G0 67 aa8.41□□□□□ -1.06
SGMS1-208ENST00000608287 TRAV7A0A075B6U4 112 aa8.4□□□□□ -1.06
SGMS1-208ENST00000608287 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.06
SGMS1-208ENST00000608287 ACYP2P14621 99 aa8.27□□□□□ -1.09
SGMS1-208ENST00000608287 C20orf197Q8N268 126 aa8.26□□□□□ -1.09
SGMS1-208ENST00000608287 P0C880 135 aa8.25□□□□□ -1.09
SGMS1-208ENST00000608287 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
SGMS1-208ENST00000608287 R4GN34 69 aa8.22□□□□□ -1.09
SGMS1-208ENST00000608287 SPRR2DP22532 72 aa8.19□□□□□ -1.1
SGMS1-208ENST00000608287 LCE1AQ5T7P2 110 aa8.19□□□□□ -1.1
SGMS1-208ENST00000608287 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
SGMS1-208ENST00000608287 M0QZ58 72 aa8.16□□□□□ -1.1
SGMS1-208ENST00000608287 SPTSSBQ8NFR3 76 aa8.16□□□□□ -1.1
SGMS1-208ENST00000608287 KRTAP8-1Q8IUC2 63 aa8.15□□□□□ -1.1
SGMS1-208ENST00000608287 SERP2Q8N6R1 65 aa8.15□□□□□ -1.1
SGMS1-208ENST00000608287 CHKB-CPT1BH3BT56 60 aa8.14□□□□□ -1.11
SGMS1-208ENST00000608287 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
SGMS1-208ENST00000608287 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
SGMS1-208ENST00000608287 GPR98Q8WXG9 6306 aa8.1□□□□□ -1.11
SGMS1-208ENST00000608287 SPANXA2-OT1Q8N9U9 137 aa8.09□□□□□ -1.11
SGMS1-208ENST00000608287 LINC01554Q52M75 96 aa8.06□□□□□ -1.12
SGMS1-208ENST00000608287 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
SGMS1-208ENST00000608287 MT1XP80297 61 aa8.01□□□□□ -1.13
SGMS1-208ENST00000608287 COX7CP15954 63 aa7.93□□□□□ -1.14
SGMS1-208ENST00000608287 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
SGMS1-208ENST00000608287 COA5Q86WW8 74 aa7.88□□□□□ -1.15
SGMS1-208ENST00000608287 H7BZZ5 65 aa7.78□□□□□ -1.16
SGMS1-208ENST00000608287 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
SGMS1-208ENST00000608287 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
SGMS1-208ENST00000608287 SEC61GP60059 68 aa7.72□□□□□ -1.17
SGMS1-208ENST00000608287 ANAPC13Q9BS18 74 aa7.72□□□□□ -1.17
SGMS1-208ENST00000608287 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
SGMS1-208ENST00000608287 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
SGMS1-208ENST00000608287 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
SGMS1-208ENST00000608287 DSTQ03001 7570 aaKnown RBP7.7□□□□□ -1.18
SGMS1-208ENST00000608287 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
SGMS1-208ENST00000608287 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
SGMS1-208ENST00000608287 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
SGMS1-208ENST00000608287 KRTAP4-9Q9BYQ8 210 aa7.57□□□□□ -1.2
SGMS1-208ENST00000608287 A0A0D9SG42 100 aa7.56□□□□□ -1.2
SGMS1-208ENST00000608287 A0A1B0GU33 70 aa7.56□□□□□ -1.2
SGMS1-208ENST00000608287 CCDC179H3BU77 68 aa7.56□□□□□ -1.2
SGMS1-208ENST00000608287 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
SGMS1-208ENST00000608287 A0A1B0GU69 56 aa7.48□□□□□ -1.21
SGMS1-208ENST00000608287 SPINT4Q6UDR6 99 aa7.45□□□□□ -1.22
SGMS1-208ENST00000608287 ATP5EP56381 51 aaPredicted RBP7.42□□□□□ -1.22
SGMS1-208ENST00000608287 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
SGMS1-208ENST00000608287 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
SGMS1-208ENST00000608287 LCE1DQ5T752 114 aa7.35□□□□□ -1.23
SGMS1-208ENST00000608287 A8MU10 97 aa7.29□□□□□ -1.24
SGMS1-208ENST00000608287 PRR15LQ9BU68 103 aa7.29□□□□□ -1.24
SGMS1-208ENST00000608287 LCE5AQ5TCM9 118 aa7.28□□□□□ -1.24
SGMS1-208ENST00000608287 TMEM258P61165 79 aa7.27□□□□□ -1.25
SGMS1-208ENST00000608287 LCE4AQ5TA78 99 aa7.23□□□□□ -1.25
SGMS1-208ENST00000608287 HMCN1Q96RW7 5635 aa7.22□□□□□ -1.25
SGMS1-208ENST00000608287 LINC01558Q9Y6Z2 57 aa7.22□□□□□ -1.25
SGMS1-208ENST00000608287 KRTAP5-10Q6L8G5 202 aa7.21□□□□□ -1.26
SGMS1-208ENST00000608287 MT4P47944 62 aa7.18□□□□□ -1.26
SGMS1-208ENST00000608287 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
SGMS1-208ENST00000608287 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.26
SGMS1-208ENST00000608287 AHNAK2Q8IVF2 5795 aa7.12□□□□□ -1.27
SGMS1-208ENST00000608287 MT1EP04732 61 aa7.09□□□□□ -1.27
SGMS1-208ENST00000608287 KRTAP5-7Q6L8G8 165 aa7.07□□□□□ -1.28
SGMS1-208ENST00000608287 UQCR11O14957 56 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms