RNA–Protein interactions for RNA: ENST00000607742.5

SERAC1-207, Transcript of serine active site containing 1, humanhuman

TSL 1 (best)

Gene SERAC1, Length 5,155 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERAC1-207ENST00000607742 C9orf92A6NGG3 77 aa3.26□□□□□ -1.89
SERAC1-207ENST00000607742 FAT3Q8TDW7 4589 aa3.26□□□□□ -1.89
SERAC1-207ENST00000607742 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
SERAC1-207ENST00000607742 KRTAP10-2P60368 255 aa3.23□□□□□ -1.89
SERAC1-207ENST00000607742 LCE6AA0A183 80 aa3.23□□□□□ -1.89
SERAC1-207ENST00000607742 Q6ZSA8 131 aa3.23□□□□□ -1.89
SERAC1-207ENST00000607742 PSORS1C2Q9UIG4 136 aa3.23□□□□□ -1.89
SERAC1-207ENST00000607742 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
SERAC1-207ENST00000607742 KRTAP29-1A8MX34 341 aaPredicted RBP3.21□□□□□ -1.9
SERAC1-207ENST00000607742 Q8N1X5 172 aa3.21□□□□□ -1.9
SERAC1-207ENST00000607742 MUC2Q02817 5179 aa3.2□□□□□ -1.9
SERAC1-207ENST00000607742 LINC00472Q9H8W2 130 aa3.2□□□□□ -1.9
SERAC1-207ENST00000607742 Q5VSD8 79 aa3.19□□□□□ -1.9
SERAC1-207ENST00000607742 PLAC4Q8WY50 150 aa3.19□□□□□ -1.9
SERAC1-207ENST00000607742 SPRR1BP22528 89 aa3.16□□□□□ -1.9
SERAC1-207ENST00000607742 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
SERAC1-207ENST00000607742 LRP2P98164 4655 aa3.15□□□□□ -1.9
SERAC1-207ENST00000607742 KRTAP10-1P60331 282 aa3.14□□□□□ -1.91
SERAC1-207ENST00000607742 MMP24-AS1A0A0U1RRL7 71 aa3.14□□□□□ -1.91
SERAC1-207ENST00000607742 KRTAP13-2Q52LG2 175 aa3.14□□□□□ -1.91
SERAC1-207ENST00000607742 KRTAP21-3Q3LHN1 58 aa3.12□□□□□ -1.91
SERAC1-207ENST00000607742 KRTAP13-3Q3SY46 172 aa3.11□□□□□ -1.91
SERAC1-207ENST00000607742 PLAC8Q9NZF1 115 aa3.11□□□□□ -1.91
SERAC1-207ENST00000607742 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
SERAC1-207ENST00000607742 KRTAP1-4P0C5Y4 121 aa3.11□□□□□ -1.91
SERAC1-207ENST00000607742 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
SERAC1-207ENST00000607742 H1FX-AS1Q4G0G2 97 aa3.09□□□□□ -1.91
SERAC1-207ENST00000607742 KRTAP10-4P60372 401 aaPredicted RBP3.08□□□□□ -1.92
SERAC1-207ENST00000607742 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
SERAC1-207ENST00000607742 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
SERAC1-207ENST00000607742 KRTAP15-1Q3LI76 137 aa3.02□□□□□ -1.93
SERAC1-207ENST00000607742 HERC1Q15751 4861 aa3.01□□□□□ -1.93
SERAC1-207ENST00000607742 KRTAP3-3Q9BYR6 98 aa3□□□□□ -1.93
SERAC1-207ENST00000607742 KRTAP3-2Q9BYR7 98 aa3□□□□□ -1.93
SERAC1-207ENST00000607742 A0A1B0GVY2 172 aa2.99□□□□□ -1.93
SERAC1-207ENST00000607742 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
SERAC1-207ENST00000607742 TPRXLQ17RH7 258 aa2.96□□□□□ -1.93
SERAC1-207ENST00000607742 KRTAP3-1Q9BYR8 98 aa2.96□□□□□ -1.94
SERAC1-207ENST00000607742 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
SERAC1-207ENST00000607742 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
SERAC1-207ENST00000607742 S4R3F8 94 aa2.95□□□□□ -1.94
SERAC1-207ENST00000607742 INE1O15225 51 aa2.93□□□□□ -1.94
SERAC1-207ENST00000607742 HERC2O95714 4834 aa2.93□□□□□ -1.94
SERAC1-207ENST00000607742 H0YAA0 97 aa2.92□□□□□ -1.94
SERAC1-207ENST00000607742 KRTAP4-5Q9BYR2 181 aa2.91□□□□□ -1.94
SERAC1-207ENST00000607742 KRTAP10-8P60410 259 aa2.89□□□□□ -1.95
SERAC1-207ENST00000607742 M0QZ58 72 aa2.87□□□□□ -1.95
SERAC1-207ENST00000607742 UBR4Q5T4S7 5183 aa2.86□□□□□ -1.95
SERAC1-207ENST00000607742 FLGP20930 4061 aaPredicted RBP2.86□□□□□ -1.95
SERAC1-207ENST00000607742 RPS29P62273 56 aaKnown RBP2.85□□□□□ -1.95
SERAC1-207ENST00000607742 MT1HL1P0DM35 61 aa2.83□□□□□ -1.96
SERAC1-207ENST00000607742 HMCN2Q8NDA2 5059 aa2.83□□□□□ -1.96
SERAC1-207ENST00000607742 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
SERAC1-207ENST00000607742 BIRC6Q9NR09 4857 aa2.77□□□□□ -1.97
SERAC1-207ENST00000607742 KRTAP4-1Q9BYQ7 146 aa2.76□□□□□ -1.97
SERAC1-207ENST00000607742 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
SERAC1-207ENST00000607742 XP32Q5T750 250 aa2.74□□□□□ -1.97
SERAC1-207ENST00000607742 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
SERAC1-207ENST00000607742 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.98
SERAC1-207ENST00000607742 LORP23490 312 aaPredicted RBP2.69□□□□□ -1.98
SERAC1-207ENST00000607742 USH2AO75445 5202 aa2.66□□□□□ -1.98
SERAC1-207ENST00000607742 TNP1P09430 55 aa2.62□□□□□ -1.99
SERAC1-207ENST00000607742 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
SERAC1-207ENST00000607742 KMT2DO14686 5537 aa2.57□□□□□ -2
SERAC1-207ENST00000607742 LCE2CQ5TA81 110 aa2.55□□□□□ -2
SERAC1-207ENST00000607742 KRTAP12-1P59990 96 aa2.54□□□□□ -2
SERAC1-207ENST00000607742 LCE2DQ5TA82 110 aaPredicted RBP2.49□□□□□ -2.01
SERAC1-207ENST00000607742 LCE2BO14633 110 aa2.44□□□□□ -2.02
SERAC1-207ENST00000607742 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
SERAC1-207ENST00000607742 LCE2AQ5TA79 106 aaPredicted RBP2.4□□□□□ -2.03
SERAC1-207ENST00000607742 KRTAP19-1Q8IUB9 90 aa2.39□□□□□ -2.03
SERAC1-207ENST00000607742 MT1HP80294 61 aa2.36□□□□□ -2.03
SERAC1-207ENST00000607742 MT1FP04733 61 aa2.36□□□□□ -2.03
SERAC1-207ENST00000607742 KRTAP9-8Q9BYQ0 159 aa2.36□□□□□ -2.03
SERAC1-207ENST00000607742 MT2AP02795 61 aa2.31□□□□□ -2.04
SERAC1-207ENST00000607742 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
SERAC1-207ENST00000607742 CRCT1Q9UGL9 99 aa2.29□□□□□ -2.04
SERAC1-207ENST00000607742 KRTAP19-4Q3LI73 84 aa2.29□□□□□ -2.04
SERAC1-207ENST00000607742 MT1BP07438 61 aa2.26□□□□□ -2.05
SERAC1-207ENST00000607742 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
SERAC1-207ENST00000607742 KRTAP10-5P60370 271 aa2.24□□□□□ -2.05
SERAC1-207ENST00000607742 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
SERAC1-207ENST00000607742 KRTAP9-3Q9BYQ3 159 aa2.23□□□□□ -2.05
SERAC1-207ENST00000607742 MT1XP80297 61 aa2.23□□□□□ -2.05
SERAC1-207ENST00000607742 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
SERAC1-207ENST00000607742 KRTAP10-7P60409 375 aaPredicted RBP2.21□□□□□ -2.06
SERAC1-207ENST00000607742 MT3P25713 68 aa2.2□□□□□ -2.06
SERAC1-207ENST00000607742 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
SERAC1-207ENST00000607742 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
SERAC1-207ENST00000607742 KRTAP10-12P60413 245 aa2.18□□□□□ -2.06
SERAC1-207ENST00000607742 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
SERAC1-207ENST00000607742 KRTAP19-8Q3LI54 63 aa2.16□□□□□ -2.06
SERAC1-207ENST00000607742 KRTAP4-8A0A0G2JLE6 195 aa2.16□□□□□ -2.06
SERAC1-207ENST00000607742 KRTAP4-8Q9BYQ9 185 aa2.16□□□□□ -2.06
SERAC1-207ENST00000607742 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
SERAC1-207ENST00000607742 SPRR2FQ96RM1 72 aa2.09□□□□□ -2.07
SERAC1-207ENST00000607742 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
SERAC1-207ENST00000607742 KRTAP4-7Q9BYR0 210 aa2.09□□□□□ -2.07
SERAC1-207ENST00000607742 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
SERAC1-207ENST00000607742 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms