RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ZANQ9Y493 2812 aa1.17□□□□□ -2.22
LINC00397-202ENST00000606785 LYSTQ99698 3801 aa1.17□□□□□ -2.22
LINC00397-202ENST00000606785 DMDP11532 3685 aa1.17□□□□□ -2.22
LINC00397-202ENST00000606785 FREM2Q5SZK8 3169 aa1.17□□□□□ -2.22
LINC00397-202ENST00000606785 DYNC2H1Q8NCM8 4307 aaKnown RBP1.17□□□□□ -2.22
LINC00397-202ENST00000606785 TEX15Q9BXT5 2789 aa1.16□□□□□ -2.22
LINC00397-202ENST00000606785 ACANP16112 2415 aa1.16□□□□□ -2.22
LINC00397-202ENST00000606785 KMT2AQ03164 3969 aa1.16□□□□□ -2.22
LINC00397-202ENST00000606785 LAMA1P25391 3075 aa1.16□□□□□ -2.22
LINC00397-202ENST00000606785 TACC2O95359 2948 aa1.16□□□□□ -2.22
LINC00397-202ENST00000606785 CENPEQ02224 2701 aa1.16□□□□□ -2.22
LINC00397-202ENST00000606785 MXRA5Q9NR99 2828 aa1.15□□□□□ -2.23
LINC00397-202ENST00000606785 CHD8Q9HCK8 2581 aa1.15□□□□□ -2.23
LINC00397-202ENST00000606785 VPS13BQ7Z7G8 4022 aa1.15□□□□□ -2.23
LINC00397-202ENST00000606785 PKD1L1Q8TDX9 2849 aa1.15□□□□□ -2.23
LINC00397-202ENST00000606785 TEP1Q99973 2627 aaKnown RBP1.15□□□□□ -2.23
LINC00397-202ENST00000606785 USP9XQ93008 2570 aaPredicted RBP1.14□□□□□ -2.23
LINC00397-202ENST00000606785 SPTBN5Q9NRC6 3674 aaKnown RBP1.14□□□□□ -2.23
LINC00397-202ENST00000606785 STAB1Q9NY15 2570 aa1.14□□□□□ -2.23
LINC00397-202ENST00000606785 EP400Q96L91 3159 aa1.14□□□□□ -2.23
LINC00397-202ENST00000606785 DNAH3Q8TD57 4116 aa1.13□□□□□ -2.23
LINC00397-202ENST00000606785 MTORP42345 2549 aa1.13□□□□□ -2.23
LINC00397-202ENST00000606785 BSNQ9UPA5 3926 aa1.13□□□□□ -2.23
LINC00397-202ENST00000606785 CENPFP49454 3210 aa1.13□□□□□ -2.23
LINC00397-202ENST00000606785 NBEAL2Q6ZNJ1 2754 aa1.13□□□□□ -2.23
LINC00397-202ENST00000606785 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
LINC00397-202ENST00000606785 HIVEP1P15822 2718 aa1.12□□□□□ -2.23
LINC00397-202ENST00000606785 ITPR2Q14571 2701 aa1.12□□□□□ -2.23
LINC00397-202ENST00000606785 SMG1Q96Q15 3661 aaKnown RBP1.12□□□□□ -2.23
LINC00397-202ENST00000606785 CSMD1Q96PZ7 3565 aa1.12□□□□□ -2.23
LINC00397-202ENST00000606785 ANKRD11Q6UB99 2663 aaPredicted RBP1.12□□□□□ -2.23
LINC00397-202ENST00000606785 FRAS1Q86XX4 4008 aa1.12□□□□□ -2.23
LINC00397-202ENST00000606785 DNAH10Q8IVF4 4471 aa1.11□□□□□ -2.23
LINC00397-202ENST00000606785 NBEAL1Q6ZS30 2694 aa1.11□□□□□ -2.23
LINC00397-202ENST00000606785 PRM1P04553 51 aa1.11□□□□□ -2.23
LINC00397-202ENST00000606785 DOPEY1Q5JWR5 2465 aa1.11□□□□□ -2.23
LINC00397-202ENST00000606785 DNAH2Q9P225 4427 aa1.11□□□□□ -2.23
LINC00397-202ENST00000606785 XIRP2A4UGR9 3374 aa1.1□□□□□ -2.23
LINC00397-202ENST00000606785 LAMA2P24043 3122 aaKnown RBP1.1□□□□□ -2.23
LINC00397-202ENST00000606785 MUC3AQ02505 3323 aa1.1□□□□□ -2.23
LINC00397-202ENST00000606785 NOTCH1P46531 2555 aa1.1□□□□□ -2.23
LINC00397-202ENST00000606785 ZNF469Q96JG9 3925 aaPredicted RBP1.09□□□□□ -2.23
LINC00397-202ENST00000606785 PRKDCP78527 4128 aaKnown RBP1.09□□□□□ -2.23
LINC00397-202ENST00000606785 TNXBP22105 4242 aa1.09□□□□□ -2.23
LINC00397-202ENST00000606785 HRNRQ86YZ3 2850 aaPredicted RBP1.09□□□□□ -2.23
LINC00397-202ENST00000606785 TLN1Q9Y490 2541 aaKnown RBP1.09□□□□□ -2.23
LINC00397-202ENST00000606785 SMR3BP02814 79 aaPredicted RBP1.09□□□□□ -2.23
LINC00397-202ENST00000606785 LAMA3Q16787 3333 aa1.09□□□□□ -2.24
LINC00397-202ENST00000606785 FLGP20930 4061 aaPredicted RBP1.09□□□□□ -2.24
LINC00397-202ENST00000606785 ACACBO00763 2458 aa1.09□□□□□ -2.24
LINC00397-202ENST00000606785 TENM3Q9P273 2699 aa1.09□□□□□ -2.24
LINC00397-202ENST00000606785 PKHD1L1Q86WI1 4243 aa1.09□□□□□ -2.24
LINC00397-202ENST00000606785 LOC400499M0QZD8 3231 aa1.08□□□□□ -2.24
LINC00397-202ENST00000606785 LAMA5O15230 3695 aa1.08□□□□□ -2.24
LINC00397-202ENST00000606785 PCNTO95613 3336 aa1.08□□□□□ -2.24
LINC00397-202ENST00000606785 ANK3Q12955 4377 aaKnown RBP1.08□□□□□ -2.24
LINC00397-202ENST00000606785 MYO18BQ8IUG5 2567 aa1.07□□□□□ -2.24
LINC00397-202ENST00000606785 DNAH7Q8WXX0 4024 aa1.07□□□□□ -2.24
LINC00397-202ENST00000606785 USP34Q70CQ2 3546 aa1.07□□□□□ -2.24
LINC00397-202ENST00000606785 UNC79Q9P2D8 2635 aa1.07□□□□□ -2.24
LINC00397-202ENST00000606785 SPTAN1Q13813 2472 aaKnown RBP1.07□□□□□ -2.24
LINC00397-202ENST00000606785 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
LINC00397-202ENST00000606785 FLNAP21333 2647 aaKnown RBP1.06□□□□□ -2.24
LINC00397-202ENST00000606785 DNAH1Q9P2D7 4330 aa1.06□□□□□ -2.24
LINC00397-202ENST00000606785 CSMD2Q7Z408 3487 aa1.06□□□□□ -2.24
LINC00397-202ENST00000606785 HUWE1Q7Z6Z7 4374 aaKnown RBP1.05□□□□□ -2.24
LINC00397-202ENST00000606785 CMYA5Q8N3K9 4069 aa1.05□□□□□ -2.24
LINC00397-202ENST00000606785 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
LINC00397-202ENST00000606785 HSPG2P98160 4391 aa1.05□□□□□ -2.24
LINC00397-202ENST00000606785 PKD1P98161 4303 aa1.04□□□□□ -2.24
LINC00397-202ENST00000606785 STAB2Q8WWQ8 2551 aa1.04□□□□□ -2.24
LINC00397-202ENST00000606785 FAT3Q8TDW7 4589 aa1.04□□□□□ -2.24
LINC00397-202ENST00000606785 SVEP1Q4LDE5 3571 aa1.04□□□□□ -2.24
LINC00397-202ENST00000606785 TLN2Q9Y4G6 2542 aa1.04□□□□□ -2.24
LINC00397-202ENST00000606785 FAT2Q9NYQ8 4349 aa1.03□□□□□ -2.24
LINC00397-202ENST00000606785 DNAH9Q9NYC9 4486 aa1.03□□□□□ -2.24
LINC00397-202ENST00000606785 ADGRG4Q8IZF6 3080 aa1.02□□□□□ -2.25
LINC00397-202ENST00000606785 VCANP13611 3396 aa1.02□□□□□ -2.25
LINC00397-202ENST00000606785 CUBNO60494 3623 aa1.02□□□□□ -2.25
LINC00397-202ENST00000606785 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
LINC00397-202ENST00000606785 ANK2Q01484 3957 aa1.02□□□□□ -2.25
LINC00397-202ENST00000606785 CEP295Q9C0D2 2601 aa1.02□□□□□ -2.25
LINC00397-202ENST00000606785 ZFYVE26Q68DK2 2539 aa1.01□□□□□ -2.25
LINC00397-202ENST00000606785 UNC80Q8N2C7 3258 aa1.01□□□□□ -2.25
LINC00397-202ENST00000606785 DNAH17Q9UFH2 4485 aa1.01□□□□□ -2.25
LINC00397-202ENST00000606785 APOBP04114 4563 aaKnown RBP1□□□□□ -2.25
LINC00397-202ENST00000606785 HECTD4Q9Y4D8 3996 aa1□□□□□ -2.25
LINC00397-202ENST00000606785 FLNBO75369 2602 aaKnown RBP0.99□□□□□ -2.25
LINC00397-202ENST00000606785 TRRAPQ9Y4A5 3859 aa0.99□□□□□ -2.25
LINC00397-202ENST00000606785 MT1AP04731 61 aa0.99□□□□□ -2.25
LINC00397-202ENST00000606785 MYO9AB2RTY4 2548 aa0.99□□□□□ -2.25
LINC00397-202ENST00000606785 DNAH6Q9C0G6 4158 aa0.99□□□□□ -2.25
LINC00397-202ENST00000606785 BRCA2P51587 3418 aa0.97□□□□□ -2.25
LINC00397-202ENST00000606785 FASNP49327 2511 aaKnown RBP0.96□□□□□ -2.26
LINC00397-202ENST00000606785 MGAM2Q2M2H8 2515 aa0.96□□□□□ -2.26
LINC00397-202ENST00000606785 LRP1Q07954 4544 aaKnown RBP0.96□□□□□ -2.26
LINC00397-202ENST00000606785 PLECQ15149 4684 aaKnown RBP0.96□□□□□ -2.26
LINC00397-202ENST00000606785 MYO15AQ9UKN7 3530 aa0.95□□□□□ -2.26
LINC00397-202ENST00000606785 DNAH5Q8TE73 4624 aa0.95□□□□□ -2.26
LINC00397-202ENST00000606785 EYSQ5T1H1 3165 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms