RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
RER1-209ENST00000605895 KRTAP12-2P59991 146 aa7.93□□□□□ -1.14
RER1-209ENST00000605895 KRTAP3-2Q9BYR7 98 aa7.92□□□□□ -1.14
RER1-209ENST00000605895 DYNC1H1Q14204 4646 aaKnown RBP7.91□□□□□ -1.14
RER1-209ENST00000605895 KRTAP10-8P60410 259 aa7.9□□□□□ -1.14
RER1-209ENST00000605895 S4R3F8 94 aa7.89□□□□□ -1.15
RER1-209ENST00000605895 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
RER1-209ENST00000605895 SACSQ9NZJ4 4579 aa7.87□□□□□ -1.15
RER1-209ENST00000605895 HSPG2P98160 4391 aa7.86□□□□□ -1.15
RER1-209ENST00000605895 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
RER1-209ENST00000605895 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
RER1-209ENST00000605895 APOBP04114 4563 aaKnown RBP7.76□□□□□ -1.17
RER1-209ENST00000605895 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
RER1-209ENST00000605895 LPAP08519 4548 aa7.69□□□□□ -1.18
RER1-209ENST00000605895 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
RER1-209ENST00000605895 FAT3Q8TDW7 4589 aa7.62□□□□□ -1.19
RER1-209ENST00000605895 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
RER1-209ENST00000605895 XP32Q5T750 250 aa7.59□□□□□ -1.19
RER1-209ENST00000605895 KMT2CQ8NEZ4 4911 aaKnown RBP7.54□□□□□ -1.2
RER1-209ENST00000605895 KRTAP21-3Q3LHN1 58 aa7.53□□□□□ -1.2
RER1-209ENST00000605895 A0A0A0MQY5 61 aa7.51□□□□□ -1.21
RER1-209ENST00000605895 LRP2P98164 4655 aa7.51□□□□□ -1.21
RER1-209ENST00000605895 M0QZ58 72 aa7.5□□□□□ -1.21
RER1-209ENST00000605895 TNXBP22105 4242 aa7.44□□□□□ -1.22
RER1-209ENST00000605895 RYR2Q92736 4967 aa7.43□□□□□ -1.22
RER1-209ENST00000605895 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
RER1-209ENST00000605895 LUZP6Q538Z0 58 aa7.4□□□□□ -1.22
RER1-209ENST00000605895 R4GN34 69 aa7.4□□□□□ -1.22
RER1-209ENST00000605895 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
RER1-209ENST00000605895 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.23
RER1-209ENST00000605895 RYR1P21817 5038 aa7.33□□□□□ -1.24
RER1-209ENST00000605895 Q5VSD8 79 aa7.32□□□□□ -1.24
RER1-209ENST00000605895 RYR3Q15413 4870 aa7.27□□□□□ -1.25
RER1-209ENST00000605895 KRTAP17-1Q9BYP8 105 aa7.24□□□□□ -1.25
RER1-209ENST00000605895 KIAA1109Q2LD37 5005 aa7.22□□□□□ -1.25
RER1-209ENST00000605895 ABCA13Q86UQ4 5058 aa7.17□□□□□ -1.26
RER1-209ENST00000605895 CAMK2N1Q7Z7J9 78 aa7.15□□□□□ -1.26
RER1-209ENST00000605895 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
RER1-209ENST00000605895 MUC2Q02817 5179 aa7.05□□□□□ -1.28
RER1-209ENST00000605895 EPPK1P58107 5090 aaKnown RBP7.01□□□□□ -1.29
RER1-209ENST00000605895 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.31
RER1-209ENST00000605895 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
RER1-209ENST00000605895 MUC17Q685J3 4493 aa6.8□□□□□ -1.32
RER1-209ENST00000605895 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
RER1-209ENST00000605895 TNP1P09430 55 aa6.75□□□□□ -1.33
RER1-209ENST00000605895 SEC61BP60468 96 aaKnown RBP6.72□□□□□ -1.33
RER1-209ENST00000605895 PCLOQ9Y6V0 5065 aa6.64□□□□□ -1.35
RER1-209ENST00000605895 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
RER1-209ENST00000605895 HERC2O95714 4834 aa6.56□□□□□ -1.36
RER1-209ENST00000605895 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
RER1-209ENST00000605895 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
RER1-209ENST00000605895 J3QL48 77 aa6.52□□□□□ -1.37
RER1-209ENST00000605895 LCE3AQ5TA76 89 aa6.46□□□□□ -1.38
RER1-209ENST00000605895 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
RER1-209ENST00000605895 HERC1Q15751 4861 aa6.38□□□□□ -1.39
RER1-209ENST00000605895 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
RER1-209ENST00000605895 RNF213Q63HN8 5207 aa6.35□□□□□ -1.39
RER1-209ENST00000605895 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
RER1-209ENST00000605895 M0R2T5 61 aa6.31□□□□□ -1.4
RER1-209ENST00000605895 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
RER1-209ENST00000605895 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
RER1-209ENST00000605895 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
RER1-209ENST00000605895 UBR4Q5T4S7 5183 aa6.18□□□□□ -1.42
RER1-209ENST00000605895 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
RER1-209ENST00000605895 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
RER1-209ENST00000605895 INE1O15225 51 aa6.09□□□□□ -1.44
RER1-209ENST00000605895 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
RER1-209ENST00000605895 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
RER1-209ENST00000605895 MT1FP04733 61 aa6.03□□□□□ -1.44
RER1-209ENST00000605895 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
RER1-209ENST00000605895 KMT2DO14686 5537 aa6.02□□□□□ -1.45
RER1-209ENST00000605895 KRTAP10-12P60413 245 aa5.96□□□□□ -1.46
RER1-209ENST00000605895 MT2AP02795 61 aa5.95□□□□□ -1.46
RER1-209ENST00000605895 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
RER1-209ENST00000605895 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
RER1-209ENST00000605895 MT1XP80297 61 aa5.91□□□□□ -1.46
RER1-209ENST00000605895 USH2AO75445 5202 aa5.91□□□□□ -1.46
RER1-209ENST00000605895 MT1HP80294 61 aa5.91□□□□□ -1.46
RER1-209ENST00000605895 MT1BP07438 61 aa5.83□□□□□ -1.48
RER1-209ENST00000605895 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
RER1-209ENST00000605895 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
RER1-209ENST00000605895 KRTAP19-8Q3LI54 63 aa5.72□□□□□ -1.49
RER1-209ENST00000605895 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
RER1-209ENST00000605895 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
RER1-209ENST00000605895 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
RER1-209ENST00000605895 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
RER1-209ENST00000605895 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
RER1-209ENST00000605895 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
RER1-209ENST00000605895 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
RER1-209ENST00000605895 LCE2BO14633 110 aa5.36□□□□□ -1.55
RER1-209ENST00000605895 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.56
RER1-209ENST00000605895 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.56
RER1-209ENST00000605895 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.56
RER1-209ENST00000605895 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
RER1-209ENST00000605895 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
RER1-209ENST00000605895 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
RER1-209ENST00000605895 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
RER1-209ENST00000605895 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
RER1-209ENST00000605895 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
RER1-209ENST00000605895 LCE2AQ5TA79 106 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms