RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 UQCRQO14949 82 aa4.74□□□□□ -1.65
TUBE1-210ENST00000604967 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
TUBE1-210ENST00000604967 KLKP1Q107X0 134 aa4.73□□□□□ -1.65
TUBE1-210ENST00000604967 LINC00643Q86TS7 51 aa4.73□□□□□ -1.65
TUBE1-210ENST00000604967 OCR1Q9BZK8 76 aa4.72□□□□□ -1.65
TUBE1-210ENST00000604967 Q5VV11 94 aa4.7□□□□□ -1.66
TUBE1-210ENST00000604967 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
TUBE1-210ENST00000604967 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
TUBE1-210ENST00000604967 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
TUBE1-210ENST00000604967 ATOX1O00244 68 aa4.66□□□□□ -1.66
TUBE1-210ENST00000604967 A6NN06 94 aa4.65□□□□□ -1.67
TUBE1-210ENST00000604967 H0YAA0 97 aa4.62□□□□□ -1.67
TUBE1-210ENST00000604967 NDUFC1O43677 76 aa4.6□□□□□ -1.67
TUBE1-210ENST00000604967 A8MUN3 132 aa4.59□□□□□ -1.67
TUBE1-210ENST00000604967 ADM2Q7Z4H4 148 aa4.59□□□□□ -1.67
TUBE1-210ENST00000604967 IMUPQ9GZP8 106 aa4.59□□□□□ -1.67
TUBE1-210ENST00000604967 CRIPTQ9P021 101 aa4.59□□□□□ -1.67
TUBE1-210ENST00000604967 P0C880 135 aa4.56□□□□□ -1.68
TUBE1-210ENST00000604967 MP68P56378 58 aa4.56□□□□□ -1.68
TUBE1-210ENST00000604967 MT-ATP8P03928 68 aa4.54□□□□□ -1.68
TUBE1-210ENST00000604967 DMAC1Q96GE9 116 aa4.54□□□□□ -1.68
TUBE1-210ENST00000604967 MT1XP80297 61 aa4.53□□□□□ -1.68
TUBE1-210ENST00000604967 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
TUBE1-210ENST00000604967 H3BPC8 53 aa4.51□□□□□ -1.69
TUBE1-210ENST00000604967 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
TUBE1-210ENST00000604967 J3QR89 54 aa4.5□□□□□ -1.69
TUBE1-210ENST00000604967 KMT2DO14686 5537 aa4.49□□□□□ -1.69
TUBE1-210ENST00000604967 NEBP20929 6669 aa4.47□□□□□ -1.69
TUBE1-210ENST00000604967 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
TUBE1-210ENST00000604967 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
TUBE1-210ENST00000604967 TRAV7A0A075B6U4 112 aa4.42□□□□□ -1.7
TUBE1-210ENST00000604967 M0QZ58 72 aa4.41□□□□□ -1.7
TUBE1-210ENST00000604967 R4GN34 69 aa4.4□□□□□ -1.71
TUBE1-210ENST00000604967 K7ERU9 68 aa4.38□□□□□ -1.71
TUBE1-210ENST00000604967 SNURFQ9Y675 71 aa4.38□□□□□ -1.71
TUBE1-210ENST00000604967 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
TUBE1-210ENST00000604967 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
TUBE1-210ENST00000604967 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
TUBE1-210ENST00000604967 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
TUBE1-210ENST00000604967 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
TUBE1-210ENST00000604967 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
TUBE1-210ENST00000604967 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
TUBE1-210ENST00000604967 ACYP2P14621 99 aa4.34□□□□□ -1.71
TUBE1-210ENST00000604967 C20orf197Q8N268 126 aa4.34□□□□□ -1.71
TUBE1-210ENST00000604967 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.71
TUBE1-210ENST00000604967 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
TUBE1-210ENST00000604967 SMIM20Q8N5G0 67 aa4.33□□□□□ -1.72
TUBE1-210ENST00000604967 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
TUBE1-210ENST00000604967 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
TUBE1-210ENST00000604967 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
TUBE1-210ENST00000604967 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
TUBE1-210ENST00000604967 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
TUBE1-210ENST00000604967 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
TUBE1-210ENST00000604967 SPRR2EP22531 72 aa4.26□□□□□ -1.73
TUBE1-210ENST00000604967 SPRR2BP35325 72 aa4.26□□□□□ -1.73
TUBE1-210ENST00000604967 SPRR2AP35326 72 aa4.26□□□□□ -1.73
TUBE1-210ENST00000604967 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
TUBE1-210ENST00000604967 SPANXA2-OT1Q8N9U9 137 aa4.25□□□□□ -1.73
TUBE1-210ENST00000604967 CHKB-CPT1BH3BT56 60 aa4.23□□□□□ -1.73
TUBE1-210ENST00000604967 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
TUBE1-210ENST00000604967 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
TUBE1-210ENST00000604967 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
TUBE1-210ENST00000604967 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
TUBE1-210ENST00000604967 H3BS24 57 aa4.18□□□□□ -1.74
TUBE1-210ENST00000604967 COA5Q86WW8 74 aa4.17□□□□□ -1.74
TUBE1-210ENST00000604967 COX7CP15954 63 aa4.13□□□□□ -1.75
TUBE1-210ENST00000604967 H7BZZ5 65 aa4.12□□□□□ -1.75
TUBE1-210ENST00000604967 SPRR2DP22532 72 aa4.11□□□□□ -1.75
TUBE1-210ENST00000604967 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
TUBE1-210ENST00000604967 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
TUBE1-210ENST00000604967 A0A0D9SG42 100 aa4.06□□□□□ -1.76
TUBE1-210ENST00000604967 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
TUBE1-210ENST00000604967 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
TUBE1-210ENST00000604967 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
TUBE1-210ENST00000604967 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
TUBE1-210ENST00000604967 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
TUBE1-210ENST00000604967 A0A1B0GU33 70 aa4□□□□□ -1.77
TUBE1-210ENST00000604967 MT1EP04732 61 aa4□□□□□ -1.77
TUBE1-210ENST00000604967 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
TUBE1-210ENST00000604967 SERP1Q9Y6X1 66 aa3.98□□□□□ -1.77
TUBE1-210ENST00000604967 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
TUBE1-210ENST00000604967 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
TUBE1-210ENST00000604967 A8MU10 97 aa3.95□□□□□ -1.78
TUBE1-210ENST00000604967 SEC61GP60059 68 aa3.95□□□□□ -1.78
TUBE1-210ENST00000604967 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
TUBE1-210ENST00000604967 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
TUBE1-210ENST00000604967 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
TUBE1-210ENST00000604967 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
TUBE1-210ENST00000604967 A0A1B0GU69 56 aa3.88□□□□□ -1.79
TUBE1-210ENST00000604967 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
TUBE1-210ENST00000604967 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
TUBE1-210ENST00000604967 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
TUBE1-210ENST00000604967 MT1LQ93083 61 aa3.82□□□□□ -1.8
TUBE1-210ENST00000604967 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
TUBE1-210ENST00000604967 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
TUBE1-210ENST00000604967 MT1GP13640 62 aa3.8□□□□□ -1.8
TUBE1-210ENST00000604967 MT1MQ8N339 61 aa3.8□□□□□ -1.8
TUBE1-210ENST00000604967 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
TUBE1-210ENST00000604967 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
TUBE1-210ENST00000604967 LINC01558Q9Y6Z2 57 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms