RNA–Protein interactions for RNA: ENST00000602149.1

ZNF549-204, Transcript of zinc finger protein 549, humanhuman

TSL 1 (best) BASIC

Gene ZNF549, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-204ENST00000602149 LRP1BQ9NZR2 4599 aa3.88□□□□□ -1.79
ZNF549-204ENST00000602149 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
ZNF549-204ENST00000602149 DNAH2Q9P225 4427 aa3.86□□□□□ -1.79
ZNF549-204ENST00000602149 PKHD1P08F94 4074 aa3.86□□□□□ -1.79
ZNF549-204ENST00000602149 DNAH5Q8TE73 4624 aa3.86□□□□□ -1.79
ZNF549-204ENST00000602149 FRAS1Q86XX4 4008 aa3.86□□□□□ -1.79
ZNF549-204ENST00000602149 DNAH8Q96JB1 4490 aa3.85□□□□□ -1.79
ZNF549-204ENST00000602149 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
ZNF549-204ENST00000602149 KIAA1109Q2LD37 5005 aa3.82□□□□□ -1.8
ZNF549-204ENST00000602149 DNAH17Q9UFH2 4485 aa3.82□□□□□ -1.8
ZNF549-204ENST00000602149 DYNC2H1Q8NCM8 4307 aaKnown RBP3.79□□□□□ -1.8
ZNF549-204ENST00000602149 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
ZNF549-204ENST00000602149 MYCBP2O75592 4640 aa3.78□□□□□ -1.8
ZNF549-204ENST00000602149 SACSQ9NZJ4 4579 aa3.77□□□□□ -1.81
ZNF549-204ENST00000602149 HECTD4Q9Y4D8 3996 aa3.77□□□□□ -1.81
ZNF549-204ENST00000602149 VPS13BQ7Z7G8 4022 aa3.74□□□□□ -1.81
ZNF549-204ENST00000602149 RYR3Q15413 4870 aa3.74□□□□□ -1.81
ZNF549-204ENST00000602149 FAT3Q8TDW7 4589 aa3.73□□□□□ -1.81
ZNF549-204ENST00000602149 LRP1Q07954 4544 aaKnown RBP3.73□□□□□ -1.81
ZNF549-204ENST00000602149 APOBP04114 4563 aaKnown RBP3.71□□□□□ -1.82
ZNF549-204ENST00000602149 P0C880 135 aa3.71□□□□□ -1.82
ZNF549-204ENST00000602149 RYR1P21817 5038 aa3.7□□□□□ -1.82
ZNF549-204ENST00000602149 H0YAA0 97 aa3.69□□□□□ -1.82
ZNF549-204ENST00000602149 FAT2Q9NYQ8 4349 aa3.69□□□□□ -1.82
ZNF549-204ENST00000602149 RYR2Q92736 4967 aa3.67□□□□□ -1.82
ZNF549-204ENST00000602149 KRTAP10-4P60372 401 aaPredicted RBP3.66□□□□□ -1.82
ZNF549-204ENST00000602149 KRTAP4-5Q9BYR2 181 aa3.65□□□□□ -1.82
ZNF549-204ENST00000602149 KRTAP17-1Q9BYP8 105 aa3.63□□□□□ -1.83
ZNF549-204ENST00000602149 PKD1P98161 4303 aa3.62□□□□□ -1.83
ZNF549-204ENST00000602149 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
ZNF549-204ENST00000602149 EPPK1P58107 5090 aaKnown RBP3.62□□□□□ -1.83
ZNF549-204ENST00000602149 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
ZNF549-204ENST00000602149 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
ZNF549-204ENST00000602149 LRP2P98164 4655 aa3.53□□□□□ -1.84
ZNF549-204ENST00000602149 HSPG2P98160 4391 aa3.51□□□□□ -1.85
ZNF549-204ENST00000602149 HERC2O95714 4834 aa3.51□□□□□ -1.85
ZNF549-204ENST00000602149 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
ZNF549-204ENST00000602149 KRTAP3-1Q9BYR8 98 aa3.48□□□□□ -1.85
ZNF549-204ENST00000602149 ABCA13Q86UQ4 5058 aa3.45□□□□□ -1.86
ZNF549-204ENST00000602149 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
ZNF549-204ENST00000602149 MUC2Q02817 5179 aa3.43□□□□□ -1.86
ZNF549-204ENST00000602149 LPAP08519 4548 aa3.43□□□□□ -1.86
ZNF549-204ENST00000602149 HERC1Q15751 4861 aa3.42□□□□□ -1.86
ZNF549-204ENST00000602149 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
ZNF549-204ENST00000602149 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
ZNF549-204ENST00000602149 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
ZNF549-204ENST00000602149 PCLOQ9Y6V0 5065 aa3.34□□□□□ -1.88
ZNF549-204ENST00000602149 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
ZNF549-204ENST00000602149 BIRC6Q9NR09 4857 aa3.31□□□□□ -1.88
ZNF549-204ENST00000602149 TNXBP22105 4242 aa3.3□□□□□ -1.88
ZNF549-204ENST00000602149 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
ZNF549-204ENST00000602149 KRTAP3-3Q9BYR6 98 aa3.3□□□□□ -1.88
ZNF549-204ENST00000602149 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
ZNF549-204ENST00000602149 FAT4Q6V0I7 4981 aa3.29□□□□□ -1.88
ZNF549-204ENST00000602149 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
ZNF549-204ENST00000602149 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
ZNF549-204ENST00000602149 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
ZNF549-204ENST00000602149 INE1O15225 51 aa3.25□□□□□ -1.89
ZNF549-204ENST00000602149 KRTAP3-2Q9BYR7 98 aa3.22□□□□□ -1.89
ZNF549-204ENST00000602149 LORP23490 312 aaPredicted RBP3.18□□□□□ -1.9
ZNF549-204ENST00000602149 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
ZNF549-204ENST00000602149 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
ZNF549-204ENST00000602149 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
ZNF549-204ENST00000602149 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
ZNF549-204ENST00000602149 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
ZNF549-204ENST00000602149 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
ZNF549-204ENST00000602149 MT1HP80294 61 aa3.06□□□□□ -1.92
ZNF549-204ENST00000602149 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
ZNF549-204ENST00000602149 KRTAP19-2Q3LHN2 52 aa2.99□□□□□ -1.93
ZNF549-204ENST00000602149 MUC17Q685J3 4493 aa2.99□□□□□ -1.93
ZNF549-204ENST00000602149 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
ZNF549-204ENST00000602149 KRTAP10-7P60409 375 aaPredicted RBP2.99□□□□□ -1.93
ZNF549-204ENST00000602149 MT2AP02795 61 aa2.98□□□□□ -1.93
ZNF549-204ENST00000602149 LCE2CQ5TA81 110 aa2.97□□□□□ -1.93
ZNF549-204ENST00000602149 USH2AO75445 5202 aa2.95□□□□□ -1.94
ZNF549-204ENST00000602149 MT1FP04733 61 aa2.94□□□□□ -1.94
ZNF549-204ENST00000602149 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
ZNF549-204ENST00000602149 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.94
ZNF549-204ENST00000602149 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
ZNF549-204ENST00000602149 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
ZNF549-204ENST00000602149 KRTAP19-8Q3LI54 63 aa2.84□□□□□ -1.95
ZNF549-204ENST00000602149 SPRR2EP22531 72 aa2.8□□□□□ -1.96
ZNF549-204ENST00000602149 SPRR2BP35325 72 aa2.8□□□□□ -1.96
ZNF549-204ENST00000602149 SPRR2AP35326 72 aa2.8□□□□□ -1.96
ZNF549-204ENST00000602149 KMT2DO14686 5537 aa2.75□□□□□ -1.97
ZNF549-204ENST00000602149 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
ZNF549-204ENST00000602149 SPRR2DP22532 72 aa2.75□□□□□ -1.97
ZNF549-204ENST00000602149 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
ZNF549-204ENST00000602149 MT1BP07438 61 aa2.73□□□□□ -1.97
ZNF549-204ENST00000602149 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
ZNF549-204ENST00000602149 LCE2BO14633 110 aa2.72□□□□□ -1.97
ZNF549-204ENST00000602149 KRTAP9-3Q9BYQ3 159 aa2.72□□□□□ -1.97
ZNF549-204ENST00000602149 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
ZNF549-204ENST00000602149 MT1XP80297 61 aa2.68□□□□□ -1.98
ZNF549-204ENST00000602149 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
ZNF549-204ENST00000602149 LCE2AQ5TA79 106 aaPredicted RBP2.67□□□□□ -1.98
ZNF549-204ENST00000602149 MT1GP13640 62 aa2.66□□□□□ -1.98
ZNF549-204ENST00000602149 LCE2DQ5TA82 110 aaPredicted RBP2.66□□□□□ -1.98
ZNF549-204ENST00000602149 KRTAP4-8A0A0G2JLE6 195 aa2.65□□□□□ -1.99
ZNF549-204ENST00000602149 KRTAP4-8Q9BYQ9 185 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms