RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 FAM240AA0A1B0GVK7 77 aa5.84□□□□□ -1.47
RPS28-204ENST00000602140 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
RPS28-204ENST00000602140 ACYP1P07311 99 aa5.83□□□□□ -1.48
RPS28-204ENST00000602140 KLKP1Q107X0 134 aa5.83□□□□□ -1.48
RPS28-204ENST00000602140 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
RPS28-204ENST00000602140 TP53AIP1Q9HCN2 124 aa5.8□□□□□ -1.48
RPS28-204ENST00000602140 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
RPS28-204ENST00000602140 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
RPS28-204ENST00000602140 IMUPQ9GZP8 106 aa5.75□□□□□ -1.49
RPS28-204ENST00000602140 A0A087WVE0 104 aa5.73□□□□□ -1.49
RPS28-204ENST00000602140 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
RPS28-204ENST00000602140 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
RPS28-204ENST00000602140 LINC00643Q86TS7 51 aa5.71□□□□□ -1.5
RPS28-204ENST00000602140 ATP5EP2Q5VTU8 51 aa5.69□□□□□ -1.5
RPS28-204ENST00000602140 MT-ATP8P03928 68 aa5.68□□□□□ -1.5
RPS28-204ENST00000602140 KMT2DO14686 5537 aa5.67□□□□□ -1.5
RPS28-204ENST00000602140 TRAV22A0A0B4J277 110 aa5.66□□□□□ -1.5
RPS28-204ENST00000602140 LOC101927531A0A1B0GV80 90 aa5.65□□□□□ -1.5
RPS28-204ENST00000602140 NDUFC1O43677 76 aa5.62□□□□□ -1.51
RPS28-204ENST00000602140 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
RPS28-204ENST00000602140 H0YAA0 97 aa5.61□□□□□ -1.51
RPS28-204ENST00000602140 SCGB1A1P11684 91 aa5.61□□□□□ -1.51
RPS28-204ENST00000602140 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
RPS28-204ENST00000602140 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
RPS28-204ENST00000602140 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
RPS28-204ENST00000602140 ADM2Q7Z4H4 148 aa5.57□□□□□ -1.52
RPS28-204ENST00000602140 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
RPS28-204ENST00000602140 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
RPS28-204ENST00000602140 A8MUN3 132 aa5.56□□□□□ -1.52
RPS28-204ENST00000602140 H0Y9P7 68 aa5.55□□□□□ -1.52
RPS28-204ENST00000602140 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
RPS28-204ENST00000602140 UQCRQO14949 82 aa5.54□□□□□ -1.52
RPS28-204ENST00000602140 ATOX1O00244 68 aa5.53□□□□□ -1.52
RPS28-204ENST00000602140 SPRR2EP22531 72 aa5.53□□□□□ -1.52
RPS28-204ENST00000602140 SPRR2BP35325 72 aa5.53□□□□□ -1.52
RPS28-204ENST00000602140 SPRR2AP35326 72 aa5.53□□□□□ -1.52
RPS28-204ENST00000602140 MT1XP80297 61 aa5.53□□□□□ -1.52
RPS28-204ENST00000602140 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
RPS28-204ENST00000602140 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
RPS28-204ENST00000602140 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
RPS28-204ENST00000602140 KRTAP8-1Q8IUC2 63 aa5.48□□□□□ -1.53
RPS28-204ENST00000602140 KRTAP4-12Q9BQ66 201 aa5.47□□□□□ -1.53
RPS28-204ENST00000602140 ANAPC13Q9BS18 74 aa5.46□□□□□ -1.54
RPS28-204ENST00000602140 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
RPS28-204ENST00000602140 PCP4P48539 62 aa5.45□□□□□ -1.54
RPS28-204ENST00000602140 LINC00208Q96KT6 92 aa5.45□□□□□ -1.54
RPS28-204ENST00000602140 SMIM20Q8N5G0 67 aa5.44□□□□□ -1.54
RPS28-204ENST00000602140 R4GN34 69 aa5.44□□□□□ -1.54
RPS28-204ENST00000602140 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
RPS28-204ENST00000602140 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
RPS28-204ENST00000602140 P0C880 135 aa5.41□□□□□ -1.54
RPS28-204ENST00000602140 TRAV7A0A075B6U4 112 aa5.39□□□□□ -1.55
RPS28-204ENST00000602140 M0QZ58 72 aa5.39□□□□□ -1.55
RPS28-204ENST00000602140 C20orf197Q8N268 126 aa5.39□□□□□ -1.55
RPS28-204ENST00000602140 SERP2Q8N6R1 65 aa5.39□□□□□ -1.55
RPS28-204ENST00000602140 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
RPS28-204ENST00000602140 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
RPS28-204ENST00000602140 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
RPS28-204ENST00000602140 COX7CP15954 63 aa5.37□□□□□ -1.55
RPS28-204ENST00000602140 MP68P56378 58 aa5.37□□□□□ -1.55
RPS28-204ENST00000602140 SPRR2DP22532 72 aa5.35□□□□□ -1.55
RPS28-204ENST00000602140 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
RPS28-204ENST00000602140 LINC01554Q52M75 96 aa5.34□□□□□ -1.55
RPS28-204ENST00000602140 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
RPS28-204ENST00000602140 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
RPS28-204ENST00000602140 KRTAP10-7P60409 375 aaPredicted RBP5.29□□□□□ -1.56
RPS28-204ENST00000602140 DMAC1Q96GE9 116 aa5.29□□□□□ -1.56
RPS28-204ENST00000602140 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
RPS28-204ENST00000602140 H3BPC8 53 aa5.25□□□□□ -1.57
RPS28-204ENST00000602140 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
RPS28-204ENST00000602140 SNURFQ9Y675 71 aa5.22□□□□□ -1.57
RPS28-204ENST00000602140 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
RPS28-204ENST00000602140 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
RPS28-204ENST00000602140 CYSTM1Q9H1C7 97 aa5.18□□□□□ -1.58
RPS28-204ENST00000602140 TMEM258P61165 79 aa5.16□□□□□ -1.58
RPS28-204ENST00000602140 H7BZZ5 65 aa5.15□□□□□ -1.59
RPS28-204ENST00000602140 ACYP2P14621 99 aa5.13□□□□□ -1.59
RPS28-204ENST00000602140 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
RPS28-204ENST00000602140 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
RPS28-204ENST00000602140 SPANXA2-OT1Q8N9U9 137 aa5.08□□□□□ -1.6
RPS28-204ENST00000602140 CHKB-CPT1BH3BT56 60 aa5.04□□□□□ -1.6
RPS28-204ENST00000602140 SERP1Q9Y6X1 66 aa5□□□□□ -1.61
RPS28-204ENST00000602140 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
RPS28-204ENST00000602140 KRTAP13-4Q3LI77 160 aa4.97□□□□□ -1.61
RPS28-204ENST00000602140 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
RPS28-204ENST00000602140 RPS28P62857 69 aaKnown RBP4.96□□□□□ -1.62
RPS28-204ENST00000602140 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
RPS28-204ENST00000602140 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
RPS28-204ENST00000602140 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
RPS28-204ENST00000602140 COA5Q86WW8 74 aa4.92□□□□□ -1.62
RPS28-204ENST00000602140 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
RPS28-204ENST00000602140 MT1EP04732 61 aa4.91□□□□□ -1.62
RPS28-204ENST00000602140 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
RPS28-204ENST00000602140 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
RPS28-204ENST00000602140 GPR98Q8WXG9 6306 aa4.86□□□□□ -1.63
RPS28-204ENST00000602140 SMIM26A0A096LP01 95 aa4.85□□□□□ -1.63
RPS28-204ENST00000602140 A0A0D9SG42 100 aa4.81□□□□□ -1.64
RPS28-204ENST00000602140 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
RPS28-204ENST00000602140 V9GYY9 64 aa4.79□□□□□ -1.64
RPS28-204ENST00000602140 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms