RNA–Protein interactions for RNA: ENST00000600681.5

FKRP-221, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-221ENST00000600681 RELNP78509 3460 aa0.37□□□□□ -2.35
FKRP-221ENST00000600681 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
FKRP-221ENST00000600681 SPRR2AP35326 72 aa0.37□□□□□ -2.35
FKRP-221ENST00000600681 MKI67P46013 3256 aaKnown RBP0.37□□□□□ -2.35
FKRP-221ENST00000600681 SPEGQ15772 3267 aa0.37□□□□□ -2.35
FKRP-221ENST00000600681 LRRK2Q5S007 2527 aa0.36□□□□□ -2.35
FKRP-221ENST00000600681 ITPR1Q14643 2758 aa0.36□□□□□ -2.35
FKRP-221ENST00000600681 VPS13BQ7Z7G8 4022 aa0.36□□□□□ -2.35
FKRP-221ENST00000600681 CSMD1Q96PZ7 3565 aa0.36□□□□□ -2.35
FKRP-221ENST00000600681 ASPMQ8IZT6 3477 aa0.36□□□□□ -2.35
FKRP-221ENST00000600681 HRNRQ86YZ3 2850 aaPredicted RBP0.36□□□□□ -2.35
FKRP-221ENST00000600681 PKD1L1Q8TDX9 2849 aa0.36□□□□□ -2.35
FKRP-221ENST00000600681 SPTBN4Q9H254 2564 aa0.35□□□□□ -2.35
FKRP-221ENST00000600681 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
FKRP-221ENST00000600681 DNAH11Q96DT5 4516 aa0.35□□□□□ -2.35
FKRP-221ENST00000600681 CFAP46Q8IYW2 2715 aa0.35□□□□□ -2.35
FKRP-221ENST00000600681 HSPG2P98160 4391 aa0.34□□□□□ -2.35
FKRP-221ENST00000600681 MYO9AB2RTY4 2548 aa0.34□□□□□ -2.35
FKRP-221ENST00000600681 NSD1Q96L73 2696 aaPredicted RBP0.34□□□□□ -2.35
FKRP-221ENST00000600681 SPART-AS1P0CW21 52 aa0.34□□□□□ -2.36
FKRP-221ENST00000600681 COL12A1Q99715 3063 aa0.34□□□□□ -2.36
FKRP-221ENST00000600681 SACSQ9NZJ4 4579 aa0.34□□□□□ -2.36
FKRP-221ENST00000600681 ANK3Q12955 4377 aaKnown RBP0.34□□□□□ -2.36
FKRP-221ENST00000600681 LRP1BQ9NZR2 4599 aa0.34□□□□□ -2.36
FKRP-221ENST00000600681 SONP18583 2426 aaKnown RBP0.34□□□□□ -2.36
FKRP-221ENST00000600681 BRCA2P51587 3418 aa0.34□□□□□ -2.36
FKRP-221ENST00000600681 NBEAL1Q6ZS30 2694 aa0.33□□□□□ -2.36
FKRP-221ENST00000600681 C5orf42Q9H799 3197 aa0.33□□□□□ -2.36
FKRP-221ENST00000600681 HTTP42858 3142 aa0.33□□□□□ -2.36
FKRP-221ENST00000600681 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
FKRP-221ENST00000600681 MXRA5Q9NR99 2828 aa0.32□□□□□ -2.36
FKRP-221ENST00000600681 MUC12Q9UKN1 5478 aa0.32□□□□□ -2.36
FKRP-221ENST00000600681 HECTD4Q9Y4D8 3996 aa0.32□□□□□ -2.36
FKRP-221ENST00000600681 CENPFP49454 3210 aa0.32□□□□□ -2.36
FKRP-221ENST00000600681 MT1AP04731 61 aa0.32□□□□□ -2.36
FKRP-221ENST00000600681 USP34Q70CQ2 3546 aa0.32□□□□□ -2.36
FKRP-221ENST00000600681 ACACAQ13085 2346 aa0.32□□□□□ -2.36
FKRP-221ENST00000600681 SPTBN5Q9NRC6 3674 aaKnown RBP0.32□□□□□ -2.36
FKRP-221ENST00000600681 CFAP54Q96N23 3096 aa0.32□□□□□ -2.36
FKRP-221ENST00000600681 MTORP42345 2549 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 CRYBG3Q68DQ2 2970 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 TEX15Q9BXT5 2789 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 DNAH3Q8TD57 4116 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 CEP250Q9BV73 2442 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 KRTAP8-1Q8IUC2 63 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 VPS13DQ5THJ4 4388 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 TENM3Q9P273 2699 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 USH2AO75445 5202 aa0.31□□□□□ -2.36
FKRP-221ENST00000600681 PKHD1L1Q86WI1 4243 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 FAT3Q8TDW7 4589 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 PKD1P98161 4303 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 STAB2Q8WWQ8 2551 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 SPRR2EP22531 72 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 DEFB104AQ8WTQ1 72 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 TTTY10Q9BZA0 68 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 DCHS1Q96JQ0 3298 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 TLN1Q9Y490 2541 aaKnown RBP0.3□□□□□ -2.36
FKRP-221ENST00000600681 CEP295Q9C0D2 2601 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 FAM186AA6NE01 2351 aa0.3□□□□□ -2.36
FKRP-221ENST00000600681 MGAM2Q2M2H8 2515 aa0.29□□□□□ -2.36
FKRP-221ENST00000600681 MAP1AP78559 2803 aaPredicted RBP0.29□□□□□ -2.36
FKRP-221ENST00000600681 DNAH9Q9NYC9 4486 aa0.29□□□□□ -2.36
FKRP-221ENST00000600681 DNAH2Q9P225 4427 aa0.29□□□□□ -2.36
FKRP-221ENST00000600681 TENM2Q9NT68 2774 aa0.28□□□□□ -2.36
FKRP-221ENST00000600681 LRBAP50851 2863 aa0.28□□□□□ -2.36
FKRP-221ENST00000600681 UTRNP46939 3433 aa0.28□□□□□ -2.36
FKRP-221ENST00000600681 USP9YO00507 2555 aaPredicted RBP0.28□□□□□ -2.36
FKRP-221ENST00000600681 SPRR2FQ96RM1 72 aa0.28□□□□□ -2.36
FKRP-221ENST00000600681 COL7A1Q02388 2944 aa0.28□□□□□ -2.36
FKRP-221ENST00000600681 SPTAN1Q13813 2472 aaKnown RBP0.28□□□□□ -2.36
FKRP-221ENST00000600681 HIVEP1P15822 2718 aa0.28□□□□□ -2.37
FKRP-221ENST00000600681 TLN2Q9Y4G6 2542 aa0.27□□□□□ -2.37
FKRP-221ENST00000600681 SRRM2Q9UQ35 2752 aaKnown RBP0.27□□□□□ -2.37
FKRP-221ENST00000600681 WDR87Q6ZQQ6 2873 aa0.27□□□□□ -2.37
FKRP-221ENST00000600681 NBPF19A0A087WUL8 3843 aa0.27□□□□□ -2.37
FKRP-221ENST00000600681 LINC01590Q5TEZ4 76 aa0.27□□□□□ -2.37
FKRP-221ENST00000600681 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
FKRP-221ENST00000600681 FRYLO94915 3013 aa0.27□□□□□ -2.37
FKRP-221ENST00000600681 TGP01266 2768 aa0.26□□□□□ -2.37
FKRP-221ENST00000600681 NF1P21359 2839 aa0.26□□□□□ -2.37
FKRP-221ENST00000600681 CSMD2Q7Z408 3487 aa0.26□□□□□ -2.37
FKRP-221ENST00000600681 PRCDQ00LT1 54 aa0.26□□□□□ -2.37
FKRP-221ENST00000600681 APOBP04114 4563 aaKnown RBP0.26□□□□□ -2.37
FKRP-221ENST00000600681 FLGP20930 4061 aaPredicted RBP0.25□□□□□ -2.37
FKRP-221ENST00000600681 DNAH14Q0VDD8 3507 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 MUC3AQ02505 3323 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 LAMA1P25391 3075 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 DYNC2H1Q8NCM8 4307 aaKnown RBP0.25□□□□□ -2.37
FKRP-221ENST00000600681 MT4P47944 62 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 KRTAP19-6Q3LI70 58 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 KRTAP19-5Q3LI72 72 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 SVEP1Q4LDE5 3571 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 PKHD1P08F94 4074 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 SPENQ96T58 3664 aaKnown RBP0.25□□□□□ -2.37
FKRP-221ENST00000600681 XIRP2A4UGR9 3374 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 LOC400499M0QZD8 3231 aa0.25□□□□□ -2.37
FKRP-221ENST00000600681 GOLGB1Q14789 3259 aaKnown RBP0.24□□□□□ -2.37
FKRP-221ENST00000600681 TRIOO75962 3097 aa0.24□□□□□ -2.37
FKRP-221ENST00000600681 SMR3BP02814 79 aaPredicted RBP0.24□□□□□ -2.37
FKRP-221ENST00000600681 DMXL1Q9Y485 3027 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms