RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 HSPG2P98160 4391 aa6.18□□□□□ -1.42
ARHGEF1-220ENST00000600274 A0A0D9SG42 100 aa6.15□□□□□ -1.42
ARHGEF1-220ENST00000600274 A0A1B0GU33 70 aa6.15□□□□□ -1.42
ARHGEF1-220ENST00000600274 A0A0A0MQY5 61 aa6.15□□□□□ -1.43
ARHGEF1-220ENST00000600274 K7ERS5 55 aa6.15□□□□□ -1.43
ARHGEF1-220ENST00000600274 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
ARHGEF1-220ENST00000600274 RYR1P21817 5038 aa6.12□□□□□ -1.43
ARHGEF1-220ENST00000600274 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
ARHGEF1-220ENST00000600274 EPPK1P58107 5090 aaKnown RBP6.1□□□□□ -1.43
ARHGEF1-220ENST00000600274 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
ARHGEF1-220ENST00000600274 ROMO1P60602 79 aa6.08□□□□□ -1.44
ARHGEF1-220ENST00000600274 TNXBP22105 4242 aa6.06□□□□□ -1.44
ARHGEF1-220ENST00000600274 H0YAA0 97 aa6.05□□□□□ -1.44
ARHGEF1-220ENST00000600274 XP32Q5T750 250 aa6.05□□□□□ -1.44
ARHGEF1-220ENST00000600274 COX6B2Q6YFQ2 88 aa6.04□□□□□ -1.44
ARHGEF1-220ENST00000600274 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
ARHGEF1-220ENST00000600274 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
ARHGEF1-220ENST00000600274 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
ARHGEF1-220ENST00000600274 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
ARHGEF1-220ENST00000600274 LRP2P98164 4655 aa5.99□□□□□ -1.45
ARHGEF1-220ENST00000600274 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
ARHGEF1-220ENST00000600274 MT1HL1P0DM35 61 aa5.97□□□□□ -1.45
ARHGEF1-220ENST00000600274 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
ARHGEF1-220ENST00000600274 LPAP08519 4548 aa5.96□□□□□ -1.46
ARHGEF1-220ENST00000600274 P0C880 135 aa5.93□□□□□ -1.46
ARHGEF1-220ENST00000600274 ABCA13Q86UQ4 5058 aa5.92□□□□□ -1.46
ARHGEF1-220ENST00000600274 S4R3F8 94 aa5.91□□□□□ -1.46
ARHGEF1-220ENST00000600274 J3QL48 77 aa5.89□□□□□ -1.47
ARHGEF1-220ENST00000600274 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
ARHGEF1-220ENST00000600274 HERC2O95714 4834 aa5.79□□□□□ -1.48
ARHGEF1-220ENST00000600274 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
ARHGEF1-220ENST00000600274 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
ARHGEF1-220ENST00000600274 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
ARHGEF1-220ENST00000600274 MUC2Q02817 5179 aa5.7□□□□□ -1.5
ARHGEF1-220ENST00000600274 KRTAP3-2Q9BYR7 98 aa5.7□□□□□ -1.5
ARHGEF1-220ENST00000600274 BIRC6Q9NR09 4857 aa5.67□□□□□ -1.5
ARHGEF1-220ENST00000600274 SEC61BP60468 96 aaKnown RBP5.66□□□□□ -1.5
ARHGEF1-220ENST00000600274 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.51
ARHGEF1-220ENST00000600274 HERC1Q15751 4861 aa5.61□□□□□ -1.51
ARHGEF1-220ENST00000600274 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
ARHGEF1-220ENST00000600274 M0QZ58 72 aa5.6□□□□□ -1.51
ARHGEF1-220ENST00000600274 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
ARHGEF1-220ENST00000600274 R4GN34 69 aa5.57□□□□□ -1.52
ARHGEF1-220ENST00000600274 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
ARHGEF1-220ENST00000600274 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
ARHGEF1-220ENST00000600274 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
ARHGEF1-220ENST00000600274 LORP23490 312 aaPredicted RBP5.48□□□□□ -1.53
ARHGEF1-220ENST00000600274 MUC17Q685J3 4493 aa5.47□□□□□ -1.53
ARHGEF1-220ENST00000600274 FAT4Q6V0I7 4981 aa5.44□□□□□ -1.54
ARHGEF1-220ENST00000600274 RNF213Q63HN8 5207 aa5.41□□□□□ -1.54
ARHGEF1-220ENST00000600274 CAMK2N1Q7Z7J9 78 aa5.41□□□□□ -1.54
ARHGEF1-220ENST00000600274 M0R2T5 61 aa5.35□□□□□ -1.55
ARHGEF1-220ENST00000600274 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
ARHGEF1-220ENST00000600274 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
ARHGEF1-220ENST00000600274 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
ARHGEF1-220ENST00000600274 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
ARHGEF1-220ENST00000600274 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
ARHGEF1-220ENST00000600274 KRTAP10-10P60014 251 aa5.09□□□□□ -1.6
ARHGEF1-220ENST00000600274 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
ARHGEF1-220ENST00000600274 MT1HP80294 61 aa5.03□□□□□ -1.6
ARHGEF1-220ENST00000600274 TNP1P09430 55 aa5□□□□□ -1.61
ARHGEF1-220ENST00000600274 MT1FP04733 61 aa4.95□□□□□ -1.62
ARHGEF1-220ENST00000600274 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
ARHGEF1-220ENST00000600274 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
ARHGEF1-220ENST00000600274 MT2AP02795 61 aa4.93□□□□□ -1.62
ARHGEF1-220ENST00000600274 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
ARHGEF1-220ENST00000600274 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
ARHGEF1-220ENST00000600274 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
ARHGEF1-220ENST00000600274 USH2AO75445 5202 aa4.81□□□□□ -1.64
ARHGEF1-220ENST00000600274 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
ARHGEF1-220ENST00000600274 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
ARHGEF1-220ENST00000600274 MT1BP07438 61 aa4.69□□□□□ -1.66
ARHGEF1-220ENST00000600274 KMT2DO14686 5537 aa4.63□□□□□ -1.67
ARHGEF1-220ENST00000600274 MT1XP80297 61 aa4.63□□□□□ -1.67
ARHGEF1-220ENST00000600274 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
ARHGEF1-220ENST00000600274 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
ARHGEF1-220ENST00000600274 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
ARHGEF1-220ENST00000600274 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.68
ARHGEF1-220ENST00000600274 KRTAP10-12P60413 245 aa4.59□□□□□ -1.68
ARHGEF1-220ENST00000600274 LCE2BO14633 110 aa4.55□□□□□ -1.68
ARHGEF1-220ENST00000600274 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
ARHGEF1-220ENST00000600274 INE1O15225 51 aa4.5□□□□□ -1.69
ARHGEF1-220ENST00000600274 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
ARHGEF1-220ENST00000600274 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
ARHGEF1-220ENST00000600274 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
ARHGEF1-220ENST00000600274 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
ARHGEF1-220ENST00000600274 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
ARHGEF1-220ENST00000600274 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
ARHGEF1-220ENST00000600274 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
ARHGEF1-220ENST00000600274 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
ARHGEF1-220ENST00000600274 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
ARHGEF1-220ENST00000600274 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
ARHGEF1-220ENST00000600274 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
ARHGEF1-220ENST00000600274 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
ARHGEF1-220ENST00000600274 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
ARHGEF1-220ENST00000600274 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
ARHGEF1-220ENST00000600274 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
ARHGEF1-220ENST00000600274 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
ARHGEF1-220ENST00000600274 KRTAP9-2Q9BYQ4 174 aa4.08□□□□□ -1.76
ARHGEF1-220ENST00000600274 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms