RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 KRTAP15-1Q3LI76 137 aa2.79□□□□□ -1.96
VRK3-220ENST00000600259 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
VRK3-220ENST00000600259 A6NN06 94 aa2.78□□□□□ -1.96
VRK3-220ENST00000600259 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
VRK3-220ENST00000600259 C14orf132Q9NPU4 83 aa2.78□□□□□ -1.96
VRK3-220ENST00000600259 LOC110117498A0A087WWA1 95 aa2.77□□□□□ -1.97
VRK3-220ENST00000600259 PDE6GP18545 87 aa2.77□□□□□ -1.97
VRK3-220ENST00000600259 KRTAP10-5P60370 271 aa2.77□□□□□ -1.97
VRK3-220ENST00000600259 Q6ZQT0 140 aa2.77□□□□□ -1.97
VRK3-220ENST00000600259 C8orf17Q9NRJ1 99 aa2.77□□□□□ -1.97
VRK3-220ENST00000600259 IGKV3D-7A0A0C4DH55 119 aa2.76□□□□□ -1.97
VRK3-220ENST00000600259 UBL5Q9BZL1 73 aa2.76□□□□□ -1.97
VRK3-220ENST00000600259 TRAV7A0A075B6U4 112 aa2.75□□□□□ -1.97
VRK3-220ENST00000600259 NDUFC1O43677 76 aa2.75□□□□□ -1.97
VRK3-220ENST00000600259 ATP5EP56381 51 aaPredicted RBP2.75□□□□□ -1.97
VRK3-220ENST00000600259 CXCL6P80162 114 aa2.75□□□□□ -1.97
VRK3-220ENST00000600259 RBM3P98179 157 aaKnown RBP2.75□□□□□ -1.97
VRK3-220ENST00000600259 KLKP1Q107X0 134 aa2.75□□□□□ -1.97
VRK3-220ENST00000600259 SPRR2GQ9BYE4 73 aa2.75□□□□□ -1.97
VRK3-220ENST00000600259 SERP1Q9Y6X1 66 aa2.75□□□□□ -1.97
VRK3-220ENST00000600259 A0A087WVE0 104 aa2.74□□□□□ -1.97
VRK3-220ENST00000600259 NDUFB1O75438 58 aa2.74□□□□□ -1.97
VRK3-220ENST00000600259 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
VRK3-220ENST00000600259 Q6ZVQ6 151 aa2.74□□□□□ -1.97
VRK3-220ENST00000600259 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
VRK3-220ENST00000600259 CYSTM1Q9H1C7 97 aa2.74□□□□□ -1.97
VRK3-220ENST00000600259 Q5VV11 94 aa2.73□□□□□ -1.97
VRK3-220ENST00000600259 H7BZZ5 65 aa2.72□□□□□ -1.97
VRK3-220ENST00000600259 Q5W150 140 aa2.72□□□□□ -1.97
VRK3-220ENST00000600259 PRR15Q8IV56 129 aa2.72□□□□□ -1.97
VRK3-220ENST00000600259 DSCR8Q96T75 97 aa2.72□□□□□ -1.97
VRK3-220ENST00000600259 SMIM26A0A096LP01 95 aa2.71□□□□□ -1.98
VRK3-220ENST00000600259 MMP24-AS1A0A0U1RRL7 71 aa2.71□□□□□ -1.98
VRK3-220ENST00000600259 C20orf197Q8N268 126 aa2.71□□□□□ -1.98
VRK3-220ENST00000600259 TMEM254Q8TBM7 123 aa2.71□□□□□ -1.98
VRK3-220ENST00000600259 MRPL34Q9BQ48 92 aaKnown RBP2.71□□□□□ -1.98
VRK3-220ENST00000600259 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
VRK3-220ENST00000600259 A0A1B0GW54 56 aa2.7□□□□□ -1.98
VRK3-220ENST00000600259 C4orf26Q17RF5 130 aa2.7□□□□□ -1.98
VRK3-220ENST00000600259 IGKV2D-30A0A075B6S6 120 aa2.68□□□□□ -1.98
VRK3-220ENST00000600259 IGKV2-30P06310 120 aa2.68□□□□□ -1.98
VRK3-220ENST00000600259 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
VRK3-220ENST00000600259 C7orf65Q6ZTY9 151 aa2.67□□□□□ -1.98
VRK3-220ENST00000600259 NREPQ16612 68 aa2.66□□□□□ -1.98
VRK3-220ENST00000600259 K7EQZ3 153 aa2.65□□□□□ -1.99
VRK3-220ENST00000600259 BPY2O14599 106 aa2.65□□□□□ -1.99
VRK3-220ENST00000600259 OCR1Q9BZK8 76 aa2.65□□□□□ -1.99
VRK3-220ENST00000600259 NDUFS5O43920 106 aa2.64□□□□□ -1.99
VRK3-220ENST00000600259 CSAG1Q6PB30 78 aa2.64□□□□□ -1.99
VRK3-220ENST00000600259 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
VRK3-220ENST00000600259 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
VRK3-220ENST00000600259 SNURFQ9Y675 71 aa2.64□□□□□ -1.99
VRK3-220ENST00000600259 SPRR2EP22531 72 aa2.63□□□□□ -1.99
VRK3-220ENST00000600259 SPRR2BP35325 72 aa2.63□□□□□ -1.99
VRK3-220ENST00000600259 SPRR2AP35326 72 aa2.63□□□□□ -1.99
VRK3-220ENST00000600259 LCA10Q71F78 164 aa2.63□□□□□ -1.99
VRK3-220ENST00000600259 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
VRK3-220ENST00000600259 LCE1AQ5T7P2 110 aa2.62□□□□□ -1.99
VRK3-220ENST00000600259 S4R3F8 94 aa2.62□□□□□ -1.99
VRK3-220ENST00000600259 Q1T7F1 81 aa2.61□□□□□ -1.99
VRK3-220ENST00000600259 CYP4F30PQ9H0H9 118 aa2.61□□□□□ -1.99
VRK3-220ENST00000600259 HCG22E2RYF7 251 aa2.6□□□□□ -1.99
VRK3-220ENST00000600259 C1orf64Q8NEQ6 169 aa2.6□□□□□ -1.99
VRK3-220ENST00000600259 Q8N9L7 120 aa2.59□□□□□ -1.99
VRK3-220ENST00000600259 V9GYY9 64 aa2.59□□□□□ -1.99
VRK3-220ENST00000600259 H3BPC8 53 aa2.58□□□□□ -2
VRK3-220ENST00000600259 MT1XP80297 61 aa2.58□□□□□ -2
VRK3-220ENST00000600259 CASC2Q6XLA1 102 aa2.58□□□□□ -2
VRK3-220ENST00000600259 BRK1Q8WUW1 75 aa2.58□□□□□ -2
VRK3-220ENST00000600259 CRIPTQ9P021 101 aa2.58□□□□□ -2
VRK3-220ENST00000600259 SEC61GP60059 68 aa2.57□□□□□ -2
VRK3-220ENST00000600259 SPANXA2-OT1Q8N9U9 137 aa2.57□□□□□ -2
VRK3-220ENST00000600259 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
VRK3-220ENST00000600259 TRAV22A0A0B4J277 110 aa2.54□□□□□ -2
VRK3-220ENST00000600259 SPRR2DP22532 72 aa2.54□□□□□ -2
VRK3-220ENST00000600259 MP68P56378 58 aa2.54□□□□□ -2
VRK3-220ENST00000600259 KRTAP12-2P59991 146 aa2.54□□□□□ -2
VRK3-220ENST00000600259 PMAIP1Q13794 54 aa2.53□□□□□ -2
VRK3-220ENST00000600259 H0YAA0 97 aa2.51□□□□□ -2.01
VRK3-220ENST00000600259 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
VRK3-220ENST00000600259 LOC101927531A0A1B0GV80 90 aa2.5□□□□□ -2.01
VRK3-220ENST00000600259 LINC00208Q96KT6 92 aa2.5□□□□□ -2.01
VRK3-220ENST00000600259 H0Y9P7 68 aa2.49□□□□□ -2.01
VRK3-220ENST00000600259 A8MUN3 132 aa2.48□□□□□ -2.01
VRK3-220ENST00000600259 TP53AIP1Q9HCN2 124 aa2.48□□□□□ -2.01
VRK3-220ENST00000600259 PSPHP1O15172 72 aa2.47□□□□□ -2.01
VRK3-220ENST00000600259 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
VRK3-220ENST00000600259 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
VRK3-220ENST00000600259 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
VRK3-220ENST00000600259 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
VRK3-220ENST00000600259 LINC01558Q9Y6Z2 57 aa2.46□□□□□ -2.02
VRK3-220ENST00000600259 CHKB-CPT1BH3BT56 60 aa2.45□□□□□ -2.02
VRK3-220ENST00000600259 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
VRK3-220ENST00000600259 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
VRK3-220ENST00000600259 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
VRK3-220ENST00000600259 ADM2Q7Z4H4 148 aa2.45□□□□□ -2.02
VRK3-220ENST00000600259 COA5Q86WW8 74 aa2.45□□□□□ -2.02
VRK3-220ENST00000600259 PRR15LQ9BU68 103 aa2.44□□□□□ -2.02
VRK3-220ENST00000600259 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
VRK3-220ENST00000600259 A6NED7 52 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms