RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 KRTAP3-3Q9BYR6 98 aa11.82□□□□□ -0.52
SIN3B-209ENST00000596802 KMT2CQ8NEZ4 4911 aaKnown RBP11.76□□□□□ -0.53
SIN3B-209ENST00000596802 HYDINQ4G0P3 5121 aa11.75□□□□□ -0.53
SIN3B-209ENST00000596802 S4R3F8 94 aa11.71□□□□□ -0.53
SIN3B-209ENST00000596802 PKHD1L1Q86WI1 4243 aa11.7□□□□□ -0.54
SIN3B-209ENST00000596802 RYR2Q92736 4967 aa11.66□□□□□ -0.54
SIN3B-209ENST00000596802 KRTAP12-2P59991 146 aa11.66□□□□□ -0.54
SIN3B-209ENST00000596802 RYR3Q15413 4870 aa11.57□□□□□ -0.56
SIN3B-209ENST00000596802 PKHD1P08F94 4074 aa11.53□□□□□ -0.56
SIN3B-209ENST00000596802 KRTAP12-1P59990 96 aa11.51□□□□□ -0.57
SIN3B-209ENST00000596802 XP32Q5T750 250 aa11.51□□□□□ -0.57
SIN3B-209ENST00000596802 SMR3BP02814 79 aaPredicted RBP11.47□□□□□ -0.57
SIN3B-209ENST00000596802 APOBP04114 4563 aaKnown RBP11.47□□□□□ -0.57
SIN3B-209ENST00000596802 KRTAP10-8P60410 259 aa11.45□□□□□ -0.58
SIN3B-209ENST00000596802 FAT1Q14517 4588 aa11.44□□□□□ -0.58
SIN3B-209ENST00000596802 DYNC1H1Q14204 4646 aaKnown RBP11.38□□□□□ -0.59
SIN3B-209ENST00000596802 A0A1B0GVY2 172 aa11.33□□□□□ -0.6
SIN3B-209ENST00000596802 KRTAP10-4P60372 401 aaPredicted RBP11.33□□□□□ -0.6
SIN3B-209ENST00000596802 LRP1Q07954 4544 aaKnown RBP11.32□□□□□ -0.6
SIN3B-209ENST00000596802 HSPG2P98160 4391 aa11.32□□□□□ -0.6
SIN3B-209ENST00000596802 FAT3Q8TDW7 4589 aa11.3□□□□□ -0.6
SIN3B-209ENST00000596802 A0A0A0MQY5 61 aa11.28□□□□□ -0.6
SIN3B-209ENST00000596802 M0QZ58 72 aa11.17□□□□□ -0.62
SIN3B-209ENST00000596802 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
SIN3B-209ENST00000596802 TNXBP22105 4242 aa11.14□□□□□ -0.63
SIN3B-209ENST00000596802 LUZP6Q538Z0 58 aa11.06□□□□□ -0.64
SIN3B-209ENST00000596802 MYCBP2O75592 4640 aa11.06□□□□□ -0.64
SIN3B-209ENST00000596802 PLAC4Q8WY50 150 aa11.06□□□□□ -0.64
SIN3B-209ENST00000596802 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
SIN3B-209ENST00000596802 BIRC6Q9NR09 4857 aa10.87□□□□□ -0.67
SIN3B-209ENST00000596802 RYR1P21817 5038 aa10.86□□□□□ -0.67
SIN3B-209ENST00000596802 KRTAP17-1Q9BYP8 105 aa10.85□□□□□ -0.67
SIN3B-209ENST00000596802 LPAP08519 4548 aa10.84□□□□□ -0.67
SIN3B-209ENST00000596802 R4GN34 69 aa10.75□□□□□ -0.69
SIN3B-209ENST00000596802 Q5VSD8 79 aa10.7□□□□□ -0.7
SIN3B-209ENST00000596802 HERC2O95714 4834 aa10.66□□□□□ -0.7
SIN3B-209ENST00000596802 KRTAP4-5Q9BYR2 181 aa10.65□□□□□ -0.7
SIN3B-209ENST00000596802 LRP2P98164 4655 aa10.6□□□□□ -0.71
SIN3B-209ENST00000596802 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
SIN3B-209ENST00000596802 PP632Q6XCG6 107 aa10.56□□□□□ -0.72
SIN3B-209ENST00000596802 ABCA13Q86UQ4 5058 aa10.48□□□□□ -0.73
SIN3B-209ENST00000596802 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
SIN3B-209ENST00000596802 PCLOQ9Y6V0 5065 aa10.34□□□□□ -0.75
SIN3B-209ENST00000596802 CAMK2N1Q7Z7J9 78 aa10.3□□□□□ -0.76
SIN3B-209ENST00000596802 SPRR5A0A1B0GTR4 108 aa10.21□□□□□ -0.78
SIN3B-209ENST00000596802 J3QL48 77 aa10.13□□□□□ -0.79
SIN3B-209ENST00000596802 MUC17Q685J3 4493 aa10.12□□□□□ -0.79
SIN3B-209ENST00000596802 KRTAP23-1A1A580 65 aa10.01□□□□□ -0.81
SIN3B-209ENST00000596802 TNP1P09430 55 aa10.01□□□□□ -0.81
SIN3B-209ENST00000596802 HERC1Q15751 4861 aa9.95□□□□□ -0.82
SIN3B-209ENST00000596802 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
SIN3B-209ENST00000596802 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
SIN3B-209ENST00000596802 KRTAP19-2Q3LHN2 52 aa9.86□□□□□ -0.83
SIN3B-209ENST00000596802 PRO2289Q9P1D8 64 aa9.79□□□□□ -0.84
SIN3B-209ENST00000596802 HMCN2Q8NDA2 5059 aa9.73□□□□□ -0.85
SIN3B-209ENST00000596802 FLGP20930 4061 aaPredicted RBP9.53□□□□□ -0.88
SIN3B-209ENST00000596802 INE1O15225 51 aa9.53□□□□□ -0.88
SIN3B-209ENST00000596802 LCE3AQ5TA76 89 aa9.44□□□□□ -0.9
SIN3B-209ENST00000596802 UBR4Q5T4S7 5183 aa9.41□□□□□ -0.9
SIN3B-209ENST00000596802 MUC2Q02817 5179 aa9.39□□□□□ -0.91
SIN3B-209ENST00000596802 SPRR2GQ9BYE4 73 aa9.25□□□□□ -0.93
SIN3B-209ENST00000596802 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
SIN3B-209ENST00000596802 KRTAP19-1Q8IUB9 90 aa9.2□□□□□ -0.94
SIN3B-209ENST00000596802 KRTAP8-1Q8IUC2 63 aa9.18□□□□□ -0.94
SIN3B-209ENST00000596802 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
SIN3B-209ENST00000596802 KRTAP10-12P60413 245 aa8.94□□□□□ -0.98
SIN3B-209ENST00000596802 KRTAP12-3P60328 96 aa8.93□□□□□ -0.98
SIN3B-209ENST00000596802 LCE2CQ5TA81 110 aa8.92□□□□□ -0.98
SIN3B-209ENST00000596802 KRTAP10-5P60370 271 aa8.77□□□□□ -1.01
SIN3B-209ENST00000596802 MT1FP04733 61 aa8.73□□□□□ -1.01
SIN3B-209ENST00000596802 MT1XP80297 61 aa8.73□□□□□ -1.01
SIN3B-209ENST00000596802 KRTAP19-8Q3LI54 63 aa8.7□□□□□ -1.02
SIN3B-209ENST00000596802 M0R2T5 61 aa8.7□□□□□ -1.02
SIN3B-209ENST00000596802 KRTAP10-10P60014 251 aa8.68□□□□□ -1.02
SIN3B-209ENST00000596802 MT2AP02795 61 aa8.68□□□□□ -1.02
SIN3B-209ENST00000596802 MT1HP80294 61 aa8.67□□□□□ -1.02
SIN3B-209ENST00000596802 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
SIN3B-209ENST00000596802 MT1BP07438 61 aa8.62□□□□□ -1.03
SIN3B-209ENST00000596802 KRTAP10-7P60409 375 aaPredicted RBP8.58□□□□□ -1.04
SIN3B-209ENST00000596802 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
SIN3B-209ENST00000596802 LCE3CQ5T5A8 94 aa8.45□□□□□ -1.06
SIN3B-209ENST00000596802 KRTAP19-5Q3LI72 72 aa8.32□□□□□ -1.08
SIN3B-209ENST00000596802 KRTAP9-6A8MVA2 160 aa8.29□□□□□ -1.08
SIN3B-209ENST00000596802 KRTAP2-3P0C7H8 128 aa8.22□□□□□ -1.09
SIN3B-209ENST00000596802 KRTAP2-4Q9BYR9 128 aa8.22□□□□□ -1.09
SIN3B-209ENST00000596802 KRTAP2-1Q9BYU5 128 aa8.22□□□□□ -1.09
SIN3B-209ENST00000596802 KRTAP9-3Q9BYQ3 159 aa8.12□□□□□ -1.11
SIN3B-209ENST00000596802 KMT2DO14686 5537 aa7.99□□□□□ -1.13
SIN3B-209ENST00000596802 LCE2DQ5TA82 110 aaPredicted RBP7.96□□□□□ -1.14
SIN3B-209ENST00000596802 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
SIN3B-209ENST00000596802 KRTAP4-7Q9BYR0 210 aa7.91□□□□□ -1.14
SIN3B-209ENST00000596802 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
SIN3B-209ENST00000596802 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
SIN3B-209ENST00000596802 LCE2BO14633 110 aa7.87□□□□□ -1.15
SIN3B-209ENST00000596802 USH2AO75445 5202 aa7.78□□□□□ -1.16
SIN3B-209ENST00000596802 KRTAP19-7Q3SYF9 63 aa7.78□□□□□ -1.16
SIN3B-209ENST00000596802 FSIP2Q5CZC0 6907 aa7.73□□□□□ -1.17
SIN3B-209ENST00000596802 KRTAP19-4Q3LI73 84 aa7.62□□□□□ -1.19
SIN3B-209ENST00000596802 MT1LQ93083 61 aa7.6□□□□□ -1.19
SIN3B-209ENST00000596802 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms