RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
LIM2-202ENST00000596399 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
LIM2-202ENST00000596399 FAM240AA0A1B0GVK7 77 aa7.06□□□□□ -1.28
LIM2-202ENST00000596399 KRTAP5-9P26371 169 aa7.06□□□□□ -1.28
LIM2-202ENST00000596399 UBL5Q9BZL1 73 aa7.06□□□□□ -1.28
LIM2-202ENST00000596399 A0A087WVE0 104 aa7.03□□□□□ -1.28
LIM2-202ENST00000596399 ACYP1P07311 99 aa7.03□□□□□ -1.28
LIM2-202ENST00000596399 MT-ATP8P03928 68 aa7□□□□□ -1.29
LIM2-202ENST00000596399 IMUPQ9GZP8 106 aa6.97□□□□□ -1.29
LIM2-202ENST00000596399 TP53AIP1Q9HCN2 124 aa6.95□□□□□ -1.3
LIM2-202ENST00000596399 CYP4F30PQ9H0H9 118 aa6.93□□□□□ -1.3
LIM2-202ENST00000596399 LINC00643Q86TS7 51 aa6.9□□□□□ -1.3
LIM2-202ENST00000596399 ANAPC13Q9BS18 74 aa6.9□□□□□ -1.3
LIM2-202ENST00000596399 CRIPTQ9P021 101 aa6.9□□□□□ -1.3
LIM2-202ENST00000596399 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
LIM2-202ENST00000596399 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
LIM2-202ENST00000596399 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
LIM2-202ENST00000596399 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
LIM2-202ENST00000596399 TRAV22A0A0B4J277 110 aa6.81□□□□□ -1.32
LIM2-202ENST00000596399 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
LIM2-202ENST00000596399 SPRR2EP22531 72 aa6.78□□□□□ -1.32
LIM2-202ENST00000596399 SPRR2BP35325 72 aa6.78□□□□□ -1.32
LIM2-202ENST00000596399 SPRR2AP35326 72 aa6.78□□□□□ -1.32
LIM2-202ENST00000596399 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
LIM2-202ENST00000596399 MT1XP80297 61 aa6.78□□□□□ -1.32
LIM2-202ENST00000596399 H0YAA0 97 aa6.77□□□□□ -1.33
LIM2-202ENST00000596399 NDUFC1O43677 76 aa6.77□□□□□ -1.33
LIM2-202ENST00000596399 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
LIM2-202ENST00000596399 A8MUN3 132 aa6.72□□□□□ -1.33
LIM2-202ENST00000596399 ATOX1O00244 68 aa6.72□□□□□ -1.33
LIM2-202ENST00000596399 CCDC179H3BU77 68 aa6.7□□□□□ -1.34
LIM2-202ENST00000596399 UQCRQO14949 82 aa6.7□□□□□ -1.34
LIM2-202ENST00000596399 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
LIM2-202ENST00000596399 H0Y9P7 68 aa6.69□□□□□ -1.34
LIM2-202ENST00000596399 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
LIM2-202ENST00000596399 COX7CP15954 63 aa6.66□□□□□ -1.34
LIM2-202ENST00000596399 LCE1AQ5T7P2 110 aa6.66□□□□□ -1.34
LIM2-202ENST00000596399 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
LIM2-202ENST00000596399 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
LIM2-202ENST00000596399 SERP2Q8N6R1 65 aa6.62□□□□□ -1.35
LIM2-202ENST00000596399 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
LIM2-202ENST00000596399 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
LIM2-202ENST00000596399 P0C880 135 aa6.6□□□□□ -1.35
LIM2-202ENST00000596399 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
LIM2-202ENST00000596399 KRTAP2-2Q9BYT5 123 aa6.6□□□□□ -1.35
LIM2-202ENST00000596399 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
LIM2-202ENST00000596399 LINC00208Q96KT6 92 aa6.57□□□□□ -1.36
LIM2-202ENST00000596399 R4GN34 69 aa6.57□□□□□ -1.36
LIM2-202ENST00000596399 SPRR2DP22532 72 aa6.55□□□□□ -1.36
LIM2-202ENST00000596399 OCR1Q9BZK8 76 aa6.55□□□□□ -1.36
LIM2-202ENST00000596399 M0QZ58 72 aa6.54□□□□□ -1.36
LIM2-202ENST00000596399 TMEM258P61165 79 aa6.53□□□□□ -1.36
LIM2-202ENST00000596399 RPS28P62857 69 aaKnown RBP6.53□□□□□ -1.36
LIM2-202ENST00000596399 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
LIM2-202ENST00000596399 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
LIM2-202ENST00000596399 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
LIM2-202ENST00000596399 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
LIM2-202ENST00000596399 MP68P56378 58 aa6.48□□□□□ -1.37
LIM2-202ENST00000596399 C20orf197Q8N268 126 aa6.44□□□□□ -1.38
LIM2-202ENST00000596399 SVIPQ8NHG7 77 aa6.43□□□□□ -1.38
LIM2-202ENST00000596399 H3BPC8 53 aa6.4□□□□□ -1.38
LIM2-202ENST00000596399 KRTAP10-12P60413 245 aa6.4□□□□□ -1.38
LIM2-202ENST00000596399 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
LIM2-202ENST00000596399 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
LIM2-202ENST00000596399 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
LIM2-202ENST00000596399 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
LIM2-202ENST00000596399 H7BZZ5 65 aa6.35□□□□□ -1.39
LIM2-202ENST00000596399 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
LIM2-202ENST00000596399 SNURFQ9Y675 71 aa6.26□□□□□ -1.41
LIM2-202ENST00000596399 SMIM26A0A096LP01 95 aa6.23□□□□□ -1.41
LIM2-202ENST00000596399 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
LIM2-202ENST00000596399 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
LIM2-202ENST00000596399 ACYP2P14621 99 aa6.14□□□□□ -1.43
LIM2-202ENST00000596399 SPANXA2-OT1Q8N9U9 137 aa6.1□□□□□ -1.43
LIM2-202ENST00000596399 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
LIM2-202ENST00000596399 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
LIM2-202ENST00000596399 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
LIM2-202ENST00000596399 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
LIM2-202ENST00000596399 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
LIM2-202ENST00000596399 CHKB-CPT1BH3BT56 60 aa6.03□□□□□ -1.44
LIM2-202ENST00000596399 Q1T7F1 81 aa6.02□□□□□ -1.45
LIM2-202ENST00000596399 V9GYY9 64 aa6.02□□□□□ -1.45
LIM2-202ENST00000596399 MT1EP04732 61 aa6.01□□□□□ -1.45
LIM2-202ENST00000596399 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
LIM2-202ENST00000596399 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
LIM2-202ENST00000596399 PRO0628Q9UI54 55 aa6□□□□□ -1.45
LIM2-202ENST00000596399 COA5Q86WW8 74 aa5.92□□□□□ -1.46
LIM2-202ENST00000596399 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
LIM2-202ENST00000596399 HMCN1Q96RW7 5635 aa5.85□□□□□ -1.47
LIM2-202ENST00000596399 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
LIM2-202ENST00000596399 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
LIM2-202ENST00000596399 A0A0D9SG42 100 aa5.84□□□□□ -1.47
LIM2-202ENST00000596399 MT1GP13640 62 aa5.8□□□□□ -1.48
LIM2-202ENST00000596399 MT4P47944 62 aa5.8□□□□□ -1.48
LIM2-202ENST00000596399 PSPHP1O15172 72 aa5.78□□□□□ -1.48
LIM2-202ENST00000596399 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
LIM2-202ENST00000596399 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
LIM2-202ENST00000596399 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
LIM2-202ENST00000596399 MT1MQ8N339 61 aa5.75□□□□□ -1.49
LIM2-202ENST00000596399 PRR15LQ9BU68 103 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms