RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 FAM240AA0A1B0GVK7 77 aa10.47□□□□□ -0.73
LSM4-204ENST00000594828 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
LSM4-204ENST00000594828 UQCRQO14949 82 aa10.44□□□□□ -0.74
LSM4-204ENST00000594828 H0Y9P7 68 aa10.4□□□□□ -0.74
LSM4-204ENST00000594828 ATOX1O00244 68 aa10.39□□□□□ -0.75
LSM4-204ENST00000594828 CRIPTQ9P021 101 aa10.37□□□□□ -0.75
LSM4-204ENST00000594828 IMUPQ9GZP8 106 aa10.35□□□□□ -0.75
LSM4-204ENST00000594828 NDUFC1O43677 76 aa10.33□□□□□ -0.76
LSM4-204ENST00000594828 KRTAP10-5P60370 271 aa10.33□□□□□ -0.76
LSM4-204ENST00000594828 LINC00643Q86TS7 51 aa10.29□□□□□ -0.76
LSM4-204ENST00000594828 H0YAA0 97 aa10.25□□□□□ -0.77
LSM4-204ENST00000594828 A8MUN3 132 aa10.24□□□□□ -0.77
LSM4-204ENST00000594828 LINC00208Q96KT6 92 aa10.23□□□□□ -0.77
LSM4-204ENST00000594828 MP68P56378 58 aa10.16□□□□□ -0.78
LSM4-204ENST00000594828 ADM2Q7Z4H4 148 aa10.15□□□□□ -0.78
LSM4-204ENST00000594828 OCR1Q9BZK8 76 aa10.15□□□□□ -0.78
LSM4-204ENST00000594828 A0A1B0GV90 55 aa10.07□□□□□ -0.8
LSM4-204ENST00000594828 NEBP20929 6669 aa10.05□□□□□ -0.8
LSM4-204ENST00000594828 MUC12Q9UKN1 5478 aa10.04□□□□□ -0.8
LSM4-204ENST00000594828 KRTAP5-9P26371 169 aa10.01□□□□□ -0.81
LSM4-204ENST00000594828 H3BPC8 53 aa9.98□□□□□ -0.81
LSM4-204ENST00000594828 J3QR89 54 aa9.94□□□□□ -0.82
LSM4-204ENST00000594828 SCGB1A1P11684 91 aa9.92□□□□□ -0.82
LSM4-204ENST00000594828 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
LSM4-204ENST00000594828 PRO2289Q9P1D8 64 aa9.92□□□□□ -0.82
LSM4-204ENST00000594828 R4GN34 69 aa9.91□□□□□ -0.82
LSM4-204ENST00000594828 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
LSM4-204ENST00000594828 P0C880 135 aa9.89□□□□□ -0.83
LSM4-204ENST00000594828 C20orf197Q8N268 126 aa9.89□□□□□ -0.83
LSM4-204ENST00000594828 MT1XP80297 61 aa9.86□□□□□ -0.83
LSM4-204ENST00000594828 KMT2DO14686 5537 aa9.83□□□□□ -0.84
LSM4-204ENST00000594828 M0QZ58 72 aa9.82□□□□□ -0.84
LSM4-204ENST00000594828 KRTAP20-1Q3LI63 56 aa9.82□□□□□ -0.84
LSM4-204ENST00000594828 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
LSM4-204ENST00000594828 MDN1Q9NU22 5596 aa9.75□□□□□ -0.85
LSM4-204ENST00000594828 TRAV7A0A075B6U4 112 aa9.71□□□□□ -0.86
LSM4-204ENST00000594828 SPRR2FQ96RM1 72 aa9.7□□□□□ -0.86
LSM4-204ENST00000594828 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
LSM4-204ENST00000594828 ACYP2P14621 99 aa9.68□□□□□ -0.86
LSM4-204ENST00000594828 KRTAP12-2P59991 146 aa9.65□□□□□ -0.86
LSM4-204ENST00000594828 KRTAP8-1Q8IUC2 63 aa9.64□□□□□ -0.87
LSM4-204ENST00000594828 SMIM20Q8N5G0 67 aa9.6□□□□□ -0.87
LSM4-204ENST00000594828 MT-ATP8P03928 68 aa9.59□□□□□ -0.87
LSM4-204ENST00000594828 SPRR2EP22531 72 aa9.59□□□□□ -0.87
LSM4-204ENST00000594828 SPRR2BP35325 72 aa9.59□□□□□ -0.87
LSM4-204ENST00000594828 SPRR2AP35326 72 aa9.59□□□□□ -0.87
LSM4-204ENST00000594828 SPTSSBQ8NFR3 76 aa9.58□□□□□ -0.88
LSM4-204ENST00000594828 KRTAP2-3P0C7H8 128 aa9.55□□□□□ -0.88
LSM4-204ENST00000594828 KRTAP2-4Q9BYR9 128 aa9.55□□□□□ -0.88
LSM4-204ENST00000594828 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
LSM4-204ENST00000594828 CHKB-CPT1BH3BT56 60 aa9.49□□□□□ -0.89
LSM4-204ENST00000594828 K7ERU9 68 aa9.49□□□□□ -0.89
LSM4-204ENST00000594828 KRTAP4-8Q9BYQ9 185 aa9.49□□□□□ -0.89
LSM4-204ENST00000594828 LCE1AQ5T7P2 110 aa9.44□□□□□ -0.9
LSM4-204ENST00000594828 SNURFQ9Y675 71 aa9.42□□□□□ -0.9
LSM4-204ENST00000594828 KRTAP10-7P60409 375 aaPredicted RBP9.41□□□□□ -0.9
LSM4-204ENST00000594828 KRTAP10-12P60413 245 aa9.37□□□□□ -0.91
LSM4-204ENST00000594828 SPANXA2-OT1Q8N9U9 137 aa9.31□□□□□ -0.92
LSM4-204ENST00000594828 SPRR2DP22532 72 aa9.27□□□□□ -0.93
LSM4-204ENST00000594828 KRTAP2-2Q9BYT5 123 aa9.24□□□□□ -0.93
LSM4-204ENST00000594828 KRTAP2-1Q9BYU5 128 aa9.24□□□□□ -0.93
LSM4-204ENST00000594828 SERP2Q8N6R1 65 aa9.22□□□□□ -0.93
LSM4-204ENST00000594828 KRTAP13-4Q3LI77 160 aa9.18□□□□□ -0.94
LSM4-204ENST00000594828 CAMK2N1Q7Z7J9 78 aa9.1□□□□□ -0.95
LSM4-204ENST00000594828 COA5Q86WW8 74 aa9.06□□□□□ -0.96
LSM4-204ENST00000594828 LCE3BQ5TA77 95 aa9.03□□□□□ -0.96
LSM4-204ENST00000594828 SEC61GP60059 68 aa8.98□□□□□ -0.97
LSM4-204ENST00000594828 SERP1Q9Y6X1 66 aa8.97□□□□□ -0.97
LSM4-204ENST00000594828 A0A0D9SG42 100 aa8.91□□□□□ -0.98
LSM4-204ENST00000594828 COX7CP15954 63 aa8.89□□□□□ -0.99
LSM4-204ENST00000594828 SPATA8Q6RVD6 105 aa8.87□□□□□ -0.99
LSM4-204ENST00000594828 A0A1B0GU33 70 aa8.83□□□□□ -1
LSM4-204ENST00000594828 KRTAP19-7Q3SYF9 63 aa8.81□□□□□ -1
LSM4-204ENST00000594828 SPINT4Q6UDR6 99 aa8.81□□□□□ -1
LSM4-204ENST00000594828 H7BZZ5 65 aa8.79□□□□□ -1
LSM4-204ENST00000594828 CYSTM1Q9H1C7 97 aa8.76□□□□□ -1.01
LSM4-204ENST00000594828 MT1EP04732 61 aa8.75□□□□□ -1.01
LSM4-204ENST00000594828 LCE5AQ5TCM9 118 aa8.74□□□□□ -1.01
LSM4-204ENST00000594828 KRTAP12-1P59990 96 aa8.71□□□□□ -1.02
LSM4-204ENST00000594828 KRTAP19-3Q7Z4W3 81 aa8.7□□□□□ -1.02
LSM4-204ENST00000594828 A0A1B0GU69 56 aa8.62□□□□□ -1.03
LSM4-204ENST00000594828 DSTQ03001 7570 aaKnown RBP8.61□□□□□ -1.03
LSM4-204ENST00000594828 SMIM26A0A096LP01 95 aa8.59□□□□□ -1.03
LSM4-204ENST00000594828 KRTAP19-5Q3LI72 72 aa8.58□□□□□ -1.04
LSM4-204ENST00000594828 A8MU10 97 aa8.5□□□□□ -1.05
LSM4-204ENST00000594828 MT1GP13640 62 aa8.5□□□□□ -1.05
LSM4-204ENST00000594828 ANAPC13Q9BS18 74 aa8.5□□□□□ -1.05
LSM4-204ENST00000594828 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
LSM4-204ENST00000594828 KRTAP4-9Q9BYQ8 210 aa8.43□□□□□ -1.06
LSM4-204ENST00000594828 GPR98Q8WXG9 6306 aa8.39□□□□□ -1.07
LSM4-204ENST00000594828 TNP1P09430 55 aa8.36□□□□□ -1.07
LSM4-204ENST00000594828 C10orf95Q9H7T3 257 aa8.35□□□□□ -1.07
LSM4-204ENST00000594828 MT1MQ8N339 61 aa8.34□□□□□ -1.07
LSM4-204ENST00000594828 MT1LQ93083 61 aa8.34□□□□□ -1.07
LSM4-204ENST00000594828 CCDC179H3BU77 68 aa8.33□□□□□ -1.08
LSM4-204ENST00000594828 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
LSM4-204ENST00000594828 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
LSM4-204ENST00000594828 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
LSM4-204ENST00000594828 LCE1DQ5T752 114 aa8.21□□□□□ -1.1
LSM4-204ENST00000594828 LINC01558Q9Y6Z2 57 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms