RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 IGKV3D-7A0A0C4DH55 119 aa3.86□□□□□ -1.79
VMP1-213ENST00000591877 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
VMP1-213ENST00000591877 A0A087WSZ3 146 aa3.85□□□□□ -1.79
VMP1-213ENST00000591877 C5orf47Q569G3 176 aa3.85□□□□□ -1.79
VMP1-213ENST00000591877 COX6B2Q6YFQ2 88 aa3.85□□□□□ -1.79
VMP1-213ENST00000591877 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
VMP1-213ENST00000591877 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.79
VMP1-213ENST00000591877 C20orf166-AS1Q96NR2 134 aa3.84□□□□□ -1.79
VMP1-213ENST00000591877 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.79
VMP1-213ENST00000591877 FAM236AA0A1B0GUQ0 79 aa3.83□□□□□ -1.8
VMP1-213ENST00000591877 FAM236BA0A1B0GV22 79 aa3.83□□□□□ -1.8
VMP1-213ENST00000591877 A8MUU9 505 aa3.83□□□□□ -1.8
VMP1-213ENST00000591877 M0R2T5 61 aa3.83□□□□□ -1.8
VMP1-213ENST00000591877 HIST1H4AP62805 103 aaKnown RBP3.83□□□□□ -1.8
VMP1-213ENST00000591877 ATOX1O00244 68 aa3.81□□□□□ -1.8
VMP1-213ENST00000591877 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
VMP1-213ENST00000591877 A0A087WVE0 104 aa3.8□□□□□ -1.8
VMP1-213ENST00000591877 IGKV4-1P06312 121 aa3.8□□□□□ -1.8
VMP1-213ENST00000591877 J3KT08 172 aa3.79□□□□□ -1.8
VMP1-213ENST00000591877 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
VMP1-213ENST00000591877 LINC00472Q9H8W2 130 aa3.79□□□□□ -1.8
VMP1-213ENST00000591877 LINC00313P59037 77 aa3.77□□□□□ -1.81
VMP1-213ENST00000591877 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
VMP1-213ENST00000591877 A8MWP4 228 aa3.76□□□□□ -1.81
VMP1-213ENST00000591877 K7EQZ3 153 aa3.76□□□□□ -1.81
VMP1-213ENST00000591877 SMIM20Q8N5G0 67 aa3.76□□□□□ -1.81
VMP1-213ENST00000591877 PRR15Q8IV56 129 aa3.75□□□□□ -1.81
VMP1-213ENST00000591877 NDUFB1O75438 58 aa3.74□□□□□ -1.81
VMP1-213ENST00000591877 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
VMP1-213ENST00000591877 TRAV7A0A075B6U4 112 aa3.73□□□□□ -1.81
VMP1-213ENST00000591877 HCG22E2RYF7 251 aa3.73□□□□□ -1.81
VMP1-213ENST00000591877 HRES1P13985 223 aa3.73□□□□□ -1.81
VMP1-213ENST00000591877 COX7CP15954 63 aa3.73□□□□□ -1.81
VMP1-213ENST00000591877 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
VMP1-213ENST00000591877 UQCRQO14949 82 aa3.72□□□□□ -1.81
VMP1-213ENST00000591877 MMP24-AS1A0A0U1RRL7 71 aa3.7□□□□□ -1.82
VMP1-213ENST00000591877 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
VMP1-213ENST00000591877 RBM12B-AS1Q9P1G2 102 aa3.7□□□□□ -1.82
VMP1-213ENST00000591877 C8orf87E5RJ46 101 aa3.69□□□□□ -1.82
VMP1-213ENST00000591877 MT2AP02795 61 aa3.69□□□□□ -1.82
VMP1-213ENST00000591877 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
VMP1-213ENST00000591877 CASC2Q6XLA1 102 aa3.69□□□□□ -1.82
VMP1-213ENST00000591877 USH2AO75445 5202 aa3.68□□□□□ -1.82
VMP1-213ENST00000591877 hDV103S1A0JD37 113 aa3.68□□□□□ -1.82
VMP1-213ENST00000591877 WFDC13Q8IUB5 93 aa3.68□□□□□ -1.82
VMP1-213ENST00000591877 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
VMP1-213ENST00000591877 MT1FP04733 61 aa3.67□□□□□ -1.82
VMP1-213ENST00000591877 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
VMP1-213ENST00000591877 TMEM254Q8TBM7 123 aa3.67□□□□□ -1.82
VMP1-213ENST00000591877 ZCCHC13Q8WW36 166 aaKnown RBP3.66□□□□□ -1.82
VMP1-213ENST00000591877 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
VMP1-213ENST00000591877 KLKP1Q107X0 134 aa3.65□□□□□ -1.83
VMP1-213ENST00000591877 C20orf197Q8N268 126 aa3.65□□□□□ -1.83
VMP1-213ENST00000591877 MRPL34Q9BQ48 92 aaKnown RBP3.65□□□□□ -1.83
VMP1-213ENST00000591877 TP53AIP1Q9HCN2 124 aa3.65□□□□□ -1.83
VMP1-213ENST00000591877 SPINK7P58062 85 aa3.64□□□□□ -1.83
VMP1-213ENST00000591877 H3BPC8 53 aa3.62□□□□□ -1.83
VMP1-213ENST00000591877 NDUFC1O43677 76 aa3.62□□□□□ -1.83
VMP1-213ENST00000591877 MP68P56378 58 aa3.62□□□□□ -1.83
VMP1-213ENST00000591877 TRAV22A0A0B4J277 110 aa3.61□□□□□ -1.83
VMP1-213ENST00000591877 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
VMP1-213ENST00000591877 H0Y9P7 68 aa3.6□□□□□ -1.83
VMP1-213ENST00000591877 TMEM258P61165 79 aa3.6□□□□□ -1.83
VMP1-213ENST00000591877 CYSTM1Q9H1C7 97 aa3.6□□□□□ -1.83
VMP1-213ENST00000591877 SNURFQ9Y675 71 aa3.6□□□□□ -1.83
VMP1-213ENST00000591877 H7BZZ5 65 aa3.59□□□□□ -1.83
VMP1-213ENST00000591877 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
VMP1-213ENST00000591877 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
VMP1-213ENST00000591877 K7ERS5 55 aa3.57□□□□□ -1.84
VMP1-213ENST00000591877 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
VMP1-213ENST00000591877 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
VMP1-213ENST00000591877 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
VMP1-213ENST00000591877 LINC00208Q96KT6 92 aa3.57□□□□□ -1.84
VMP1-213ENST00000591877 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
VMP1-213ENST00000591877 C1orf64Q8NEQ6 169 aa3.56□□□□□ -1.84
VMP1-213ENST00000591877 LOC101927531A0A1B0GV80 90 aa3.54□□□□□ -1.84
VMP1-213ENST00000591877 C4orf26Q17RF5 130 aa3.54□□□□□ -1.84
VMP1-213ENST00000591877 H1FX-AS1Q4G0G2 97 aa3.51□□□□□ -1.85
VMP1-213ENST00000591877 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
VMP1-213ENST00000591877 CYP4F30PQ9H0H9 118 aa3.5□□□□□ -1.85
VMP1-213ENST00000591877 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
VMP1-213ENST00000591877 C7orf65Q6ZTY9 151 aa3.48□□□□□ -1.85
VMP1-213ENST00000591877 SERP1Q9Y6X1 66 aa3.48□□□□□ -1.85
VMP1-213ENST00000591877 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
VMP1-213ENST00000591877 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
VMP1-213ENST00000591877 DMAC1Q96GE9 116 aa3.41□□□□□ -1.86
VMP1-213ENST00000591877 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
VMP1-213ENST00000591877 A8MUN3 132 aa3.39□□□□□ -1.87
VMP1-213ENST00000591877 ACYP2P14621 99 aa3.39□□□□□ -1.87
VMP1-213ENST00000591877 COA5Q86WW8 74 aa3.39□□□□□ -1.87
VMP1-213ENST00000591877 A6NED7 52 aa3.38□□□□□ -1.87
VMP1-213ENST00000591877 ADM2Q7Z4H4 148 aa3.38□□□□□ -1.87
VMP1-213ENST00000591877 LCA10Q71F78 164 aa3.37□□□□□ -1.87
VMP1-213ENST00000591877 R4GN34 69 aa3.37□□□□□ -1.87
VMP1-213ENST00000591877 S4R3F8 94 aa3.37□□□□□ -1.87
VMP1-213ENST00000591877 MT1BP07438 61 aa3.36□□□□□ -1.87
VMP1-213ENST00000591877 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
VMP1-213ENST00000591877 A0A1B0GU33 70 aa3.34□□□□□ -1.87
VMP1-213ENST00000591877 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
VMP1-213ENST00000591877 CSAG1Q6PB30 78 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms