RNA–Protein interactions for RNA: ENST00000590205.2

CACNA1A-210, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-210ENST00000590205 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
CACNA1A-210ENST00000590205 Q5VSD8 79 aa4.67□□□□□ -1.66
CACNA1A-210ENST00000590205 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
CACNA1A-210ENST00000590205 PCOTHQ58A44 107 aa4.67□□□□□ -1.66
CACNA1A-210ENST00000590205 LRP1Q07954 4544 aaKnown RBP4.67□□□□□ -1.66
CACNA1A-210ENST00000590205 SMR3BP02814 79 aaPredicted RBP4.66□□□□□ -1.66
CACNA1A-210ENST00000590205 ACYP2P14621 99 aa4.64□□□□□ -1.67
CACNA1A-210ENST00000590205 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
CACNA1A-210ENST00000590205 C20orf166-AS1Q96NR2 134 aa4.59□□□□□ -1.67
CACNA1A-210ENST00000590205 IGKV2D-30A0A075B6S6 120 aa4.59□□□□□ -1.68
CACNA1A-210ENST00000590205 K7ERS5 55 aa4.58□□□□□ -1.68
CACNA1A-210ENST00000590205 SPINK1P00995 79 aa4.57□□□□□ -1.68
CACNA1A-210ENST00000590205 HERC1Q15751 4861 aa4.57□□□□□ -1.68
CACNA1A-210ENST00000590205 MUC17Q685J3 4493 aa4.57□□□□□ -1.68
CACNA1A-210ENST00000590205 SPINK6Q6UWN8 80 aa4.55□□□□□ -1.68
CACNA1A-210ENST00000590205 MT1HL1P0DM35 61 aa4.54□□□□□ -1.68
CACNA1A-210ENST00000590205 A8MUU9 505 aa4.53□□□□□ -1.68
CACNA1A-210ENST00000590205 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
CACNA1A-210ENST00000590205 HMCN2Q8NDA2 5059 aa4.48□□□□□ -1.69
CACNA1A-210ENST00000590205 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
CACNA1A-210ENST00000590205 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
CACNA1A-210ENST00000590205 KRTAP3-1Q9BYR8 98 aa4.47□□□□□ -1.69
CACNA1A-210ENST00000590205 LCE2BO14633 110 aa4.46□□□□□ -1.7
CACNA1A-210ENST00000590205 TYMSOSQ8TAI1 123 aa4.46□□□□□ -1.7
CACNA1A-210ENST00000590205 A0A1B0GU69 56 aa4.46□□□□□ -1.7
CACNA1A-210ENST00000590205 FLG2Q5D862 2391 aaPredicted RBP4.45□□□□□ -1.7
CACNA1A-210ENST00000590205 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
CACNA1A-210ENST00000590205 UQCR11O14957 56 aa4.43□□□□□ -1.7
CACNA1A-210ENST00000590205 CRIPTQ9P021 101 aa4.43□□□□□ -1.7
CACNA1A-210ENST00000590205 DMBT1Q9UGM3 2413 aaPredicted RBP4.39□□□□□ -1.71
CACNA1A-210ENST00000590205 LPAP08519 4548 aa4.37□□□□□ -1.71
CACNA1A-210ENST00000590205 H0YAA0 97 aa4.36□□□□□ -1.71
CACNA1A-210ENST00000590205 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
CACNA1A-210ENST00000590205 COX6B2Q6YFQ2 88 aa4.31□□□□□ -1.72
CACNA1A-210ENST00000590205 LRP2P98164 4655 aa4.3□□□□□ -1.72
CACNA1A-210ENST00000590205 UBR4Q5T4S7 5183 aa4.29□□□□□ -1.72
CACNA1A-210ENST00000590205 H1FX-AS1Q4G0G2 97 aa4.29□□□□□ -1.72
CACNA1A-210ENST00000590205 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
CACNA1A-210ENST00000590205 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
CACNA1A-210ENST00000590205 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
CACNA1A-210ENST00000590205 A0A1B0GU33 70 aa4.24□□□□□ -1.73
CACNA1A-210ENST00000590205 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
CACNA1A-210ENST00000590205 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
CACNA1A-210ENST00000590205 TPRXLQ17RH7 258 aa4.2□□□□□ -1.74
CACNA1A-210ENST00000590205 XP32Q5T750 250 aa4.19□□□□□ -1.74
CACNA1A-210ENST00000590205 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
CACNA1A-210ENST00000590205 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
CACNA1A-210ENST00000590205 MUC2Q02817 5179 aa4.17□□□□□ -1.74
CACNA1A-210ENST00000590205 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.75
CACNA1A-210ENST00000590205 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
CACNA1A-210ENST00000590205 S4R3F8 94 aa4.08□□□□□ -1.76
CACNA1A-210ENST00000590205 KRTAP4-8Q9BYQ9 185 aa4.06□□□□□ -1.76
CACNA1A-210ENST00000590205 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
CACNA1A-210ENST00000590205 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
CACNA1A-210ENST00000590205 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
CACNA1A-210ENST00000590205 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
CACNA1A-210ENST00000590205 KRTAP19-2Q3LHN2 52 aa4□□□□□ -1.77
CACNA1A-210ENST00000590205 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
CACNA1A-210ENST00000590205 R4GN34 69 aa4□□□□□ -1.77
CACNA1A-210ENST00000590205 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
CACNA1A-210ENST00000590205 M0QZ58 72 aa3.98□□□□□ -1.77
CACNA1A-210ENST00000590205 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
CACNA1A-210ENST00000590205 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
CACNA1A-210ENST00000590205 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
CACNA1A-210ENST00000590205 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
CACNA1A-210ENST00000590205 MT1HP80294 61 aa3.84□□□□□ -1.79
CACNA1A-210ENST00000590205 A0A0D9SG42 100 aa3.83□□□□□ -1.8
CACNA1A-210ENST00000590205 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
CACNA1A-210ENST00000590205 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
CACNA1A-210ENST00000590205 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
CACNA1A-210ENST00000590205 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
CACNA1A-210ENST00000590205 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
CACNA1A-210ENST00000590205 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
CACNA1A-210ENST00000590205 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
CACNA1A-210ENST00000590205 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
CACNA1A-210ENST00000590205 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
CACNA1A-210ENST00000590205 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
CACNA1A-210ENST00000590205 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
CACNA1A-210ENST00000590205 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
CACNA1A-210ENST00000590205 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
CACNA1A-210ENST00000590205 MT2AP02795 61 aa3.6□□□□□ -1.83
CACNA1A-210ENST00000590205 M0R2T5 61 aa3.6□□□□□ -1.83
CACNA1A-210ENST00000590205 LCE1DQ5T752 114 aa3.59□□□□□ -1.83
CACNA1A-210ENST00000590205 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
CACNA1A-210ENST00000590205 MT1FP04733 61 aa3.58□□□□□ -1.84
CACNA1A-210ENST00000590205 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
CACNA1A-210ENST00000590205 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
CACNA1A-210ENST00000590205 KRTAP19-1Q8IUB9 90 aa3.54□□□□□ -1.84
CACNA1A-210ENST00000590205 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
CACNA1A-210ENST00000590205 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
CACNA1A-210ENST00000590205 USH2AO75445 5202 aa3.51□□□□□ -1.85
CACNA1A-210ENST00000590205 INE1O15225 51 aa3.51□□□□□ -1.85
CACNA1A-210ENST00000590205 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
CACNA1A-210ENST00000590205 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
CACNA1A-210ENST00000590205 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
CACNA1A-210ENST00000590205 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
CACNA1A-210ENST00000590205 TNP1P09430 55 aa3.44□□□□□ -1.86
CACNA1A-210ENST00000590205 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
CACNA1A-210ENST00000590205 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
CACNA1A-210ENST00000590205 MT1BP07438 61 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms