RNA–Protein interactions for RNA: ENST00000590187.2

NCAN-204, Transcript of neurocan, humanhuman

TSL 1 (best)

Gene NCAN, Length 2,361 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-204ENST00000590187 Q5W150 140 aa9□□□□□ -0.97
NCAN-204ENST00000590187 P0C880 135 aa8.99□□□□□ -0.97
NCAN-204ENST00000590187 LINC00304Q8N9R0 145 aa8.97□□□□□ -0.97
NCAN-204ENST00000590187 LINC00483Q53H64 154 aa8.96□□□□□ -0.98
NCAN-204ENST00000590187 IGLV9-49A0A0B4J1Y8 123 aa8.95□□□□□ -0.98
NCAN-204ENST00000590187 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
NCAN-204ENST00000590187 A8MUU9 505 aa8.91□□□□□ -0.98
NCAN-204ENST00000590187 HMCN2Q8NDA2 5059 aa8.9□□□□□ -0.98
NCAN-204ENST00000590187 SSBP3-AS1Q7Z2R9 100 aa8.85□□□□□ -0.99
NCAN-204ENST00000590187 A0A0A0MQY5 61 aa8.84□□□□□ -0.99
NCAN-204ENST00000590187 SPINK1P00995 79 aa8.8□□□□□ -1
NCAN-204ENST00000590187 IGKV2-30P06310 120 aa8.73□□□□□ -1.01
NCAN-204ENST00000590187 H0YAA0 97 aa8.72□□□□□ -1.01
NCAN-204ENST00000590187 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
NCAN-204ENST00000590187 LPAP08519 4548 aa8.68□□□□□ -1.02
NCAN-204ENST00000590187 LRP2P98164 4655 aa8.68□□□□□ -1.02
NCAN-204ENST00000590187 CRIPTQ9P021 101 aa8.65□□□□□ -1.02
NCAN-204ENST00000590187 UBR4Q5T4S7 5183 aa8.63□□□□□ -1.03
NCAN-204ENST00000590187 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
NCAN-204ENST00000590187 C20orf166-AS1Q96NR2 134 aa8.62□□□□□ -1.03
NCAN-204ENST00000590187 NDUFAF8A1L188 74 aa8.61□□□□□ -1.03
NCAN-204ENST00000590187 KRTAP16-1A8MUX0 517 aa8.59□□□□□ -1.03
NCAN-204ENST00000590187 IGKV2D-30A0A075B6S6 120 aa8.58□□□□□ -1.04
NCAN-204ENST00000590187 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
NCAN-204ENST00000590187 A0A1B0GU33 70 aa8.51□□□□□ -1.05
NCAN-204ENST00000590187 KRTAP15-1Q3LI76 137 aa8.51□□□□□ -1.05
NCAN-204ENST00000590187 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
NCAN-204ENST00000590187 K7ERS5 55 aa8.45□□□□□ -1.06
NCAN-204ENST00000590187 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
NCAN-204ENST00000590187 XP32Q5T750 250 aa8.42□□□□□ -1.06
NCAN-204ENST00000590187 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
NCAN-204ENST00000590187 SEC61BP60468 96 aaKnown RBP8.39□□□□□ -1.07
NCAN-204ENST00000590187 MUC17Q685J3 4493 aa8.34□□□□□ -1.07
NCAN-204ENST00000590187 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
NCAN-204ENST00000590187 MUC2Q02817 5179 aa8.24□□□□□ -1.09
NCAN-204ENST00000590187 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
NCAN-204ENST00000590187 KRTAP4-1Q9BYQ7 146 aa8.22□□□□□ -1.09
NCAN-204ENST00000590187 LUZP6Q538Z0 58 aa8.21□□□□□ -1.09
NCAN-204ENST00000590187 C10orf95Q9H7T3 257 aa8.21□□□□□ -1.1
NCAN-204ENST00000590187 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
NCAN-204ENST00000590187 KRTAP3-1Q9BYR8 98 aa8.1□□□□□ -1.11
NCAN-204ENST00000590187 FAT4Q6V0I7 4981 aa8.04□□□□□ -1.12
NCAN-204ENST00000590187 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
NCAN-204ENST00000590187 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
NCAN-204ENST00000590187 A0A0D9SG42 100 aa7.96□□□□□ -1.14
NCAN-204ENST00000590187 KRTAP19-2Q3LHN2 52 aa7.94□□□□□ -1.14
NCAN-204ENST00000590187 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
NCAN-204ENST00000590187 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
NCAN-204ENST00000590187 MT1HP80294 61 aa7.86□□□□□ -1.15
NCAN-204ENST00000590187 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
NCAN-204ENST00000590187 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
NCAN-204ENST00000590187 S4R3F8 94 aa7.86□□□□□ -1.15
NCAN-204ENST00000590187 M0R2T5 61 aa7.83□□□□□ -1.16
NCAN-204ENST00000590187 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
NCAN-204ENST00000590187 PLAC4Q8WY50 150 aa7.68□□□□□ -1.18
NCAN-204ENST00000590187 KRTAP12-1P59990 96 aa7.67□□□□□ -1.18
NCAN-204ENST00000590187 FLGP20930 4061 aaPredicted RBP7.67□□□□□ -1.18
NCAN-204ENST00000590187 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
NCAN-204ENST00000590187 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
NCAN-204ENST00000590187 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
NCAN-204ENST00000590187 MT2AP02795 61 aa7.39□□□□□ -1.23
NCAN-204ENST00000590187 M0QZ58 72 aa7.35□□□□□ -1.23
NCAN-204ENST00000590187 KRTAP10-10P60014 251 aa7.35□□□□□ -1.23
NCAN-204ENST00000590187 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
NCAN-204ENST00000590187 MT1FP04733 61 aa7.33□□□□□ -1.24
NCAN-204ENST00000590187 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
NCAN-204ENST00000590187 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
NCAN-204ENST00000590187 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
NCAN-204ENST00000590187 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
NCAN-204ENST00000590187 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
NCAN-204ENST00000590187 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
NCAN-204ENST00000590187 LCE2BO14633 110 aa7.13□□□□□ -1.27
NCAN-204ENST00000590187 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
NCAN-204ENST00000590187 USH2AO75445 5202 aa7.05□□□□□ -1.28
NCAN-204ENST00000590187 R4GN34 69 aa7□□□□□ -1.29
NCAN-204ENST00000590187 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
NCAN-204ENST00000590187 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
NCAN-204ENST00000590187 INE1O15225 51 aa6.88□□□□□ -1.31
NCAN-204ENST00000590187 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
NCAN-204ENST00000590187 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
NCAN-204ENST00000590187 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
NCAN-204ENST00000590187 MT1BP07438 61 aa6.77□□□□□ -1.32
NCAN-204ENST00000590187 FCGBPQ9Y6R7 5405 aaPredicted RBP6.76□□□□□ -1.33
NCAN-204ENST00000590187 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
NCAN-204ENST00000590187 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
NCAN-204ENST00000590187 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
NCAN-204ENST00000590187 TNP1P09430 55 aa6.59□□□□□ -1.35
NCAN-204ENST00000590187 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
NCAN-204ENST00000590187 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
NCAN-204ENST00000590187 SYNE2Q8WXH0 6885 aaKnown RBP6.45□□□□□ -1.38
NCAN-204ENST00000590187 MT1XP80297 61 aa6.41□□□□□ -1.38
NCAN-204ENST00000590187 KRTAP6-3Q3LI67 103 aa6.36□□□□□ -1.39
NCAN-204ENST00000590187 KRTAP10-7P60409 375 aaPredicted RBP6.15□□□□□ -1.43
NCAN-204ENST00000590187 LCE3AQ5TA76 89 aa6.14□□□□□ -1.43
NCAN-204ENST00000590187 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
NCAN-204ENST00000590187 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
NCAN-204ENST00000590187 KMT2DO14686 5537 aa6.11□□□□□ -1.43
NCAN-204ENST00000590187 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
NCAN-204ENST00000590187 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
NCAN-204ENST00000590187 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms