RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 MP68P56378 58 aa5.49□□□□□ -1.53
TPM4-212ENST00000590180 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
TPM4-212ENST00000590180 NDUFC1O43677 76 aa5.46□□□□□ -1.54
TPM4-212ENST00000590180 OCR1Q9BZK8 76 aa5.46□□□□□ -1.54
TPM4-212ENST00000590180 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
TPM4-212ENST00000590180 KLKP1Q107X0 134 aa5.45□□□□□ -1.54
TPM4-212ENST00000590180 SCGB1A1P11684 91 aa5.44□□□□□ -1.54
TPM4-212ENST00000590180 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
TPM4-212ENST00000590180 A8MUN3 132 aa5.42□□□□□ -1.54
TPM4-212ENST00000590180 Q5VV11 94 aa5.42□□□□□ -1.54
TPM4-212ENST00000590180 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
TPM4-212ENST00000590180 H3BPC8 53 aa5.38□□□□□ -1.55
TPM4-212ENST00000590180 MT1BP07438 61 aa5.38□□□□□ -1.55
TPM4-212ENST00000590180 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
TPM4-212ENST00000590180 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
TPM4-212ENST00000590180 A6NN06 94 aa5.36□□□□□ -1.55
TPM4-212ENST00000590180 ADM2Q7Z4H4 148 aa5.34□□□□□ -1.55
TPM4-212ENST00000590180 H0YAA0 97 aa5.33□□□□□ -1.56
TPM4-212ENST00000590180 K7ERU9 68 aa5.31□□□□□ -1.56
TPM4-212ENST00000590180 MT-ATP8P03928 68 aa5.31□□□□□ -1.56
TPM4-212ENST00000590180 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
TPM4-212ENST00000590180 KRTAP10-5P60370 271 aa5.26□□□□□ -1.57
TPM4-212ENST00000590180 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
TPM4-212ENST00000590180 TRAV7A0A075B6U4 112 aa5.25□□□□□ -1.57
TPM4-212ENST00000590180 SMIM20Q8N5G0 67 aa5.25□□□□□ -1.57
TPM4-212ENST00000590180 ACYP2P14621 99 aa5.21□□□□□ -1.58
TPM4-212ENST00000590180 C20orf197Q8N268 126 aa5.21□□□□□ -1.58
TPM4-212ENST00000590180 P0C880 135 aa5.2□□□□□ -1.58
TPM4-212ENST00000590180 R4GN34 69 aa5.2□□□□□ -1.58
TPM4-212ENST00000590180 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
TPM4-212ENST00000590180 M0QZ58 72 aa5.16□□□□□ -1.58
TPM4-212ENST00000590180 SNURFQ9Y675 71 aa5.16□□□□□ -1.58
TPM4-212ENST00000590180 SPTSSBQ8NFR3 76 aa5.15□□□□□ -1.59
TPM4-212ENST00000590180 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.59
TPM4-212ENST00000590180 CHKB-CPT1BH3BT56 60 aa5.13□□□□□ -1.59
TPM4-212ENST00000590180 LINC01554Q52M75 96 aa5.12□□□□□ -1.59
TPM4-212ENST00000590180 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
TPM4-212ENST00000590180 NEBP20929 6669 aa5.1□□□□□ -1.59
TPM4-212ENST00000590180 SERP2Q8N6R1 65 aa5.08□□□□□ -1.6
TPM4-212ENST00000590180 MT1XP80297 61 aa5.05□□□□□ -1.6
TPM4-212ENST00000590180 SPANXA2-OT1Q8N9U9 137 aa5.05□□□□□ -1.6
TPM4-212ENST00000590180 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
TPM4-212ENST00000590180 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
TPM4-212ENST00000590180 COX7CP15954 63 aa4.93□□□□□ -1.62
TPM4-212ENST00000590180 KMT2DO14686 5537 aa4.92□□□□□ -1.62
TPM4-212ENST00000590180 COA5Q86WW8 74 aa4.92□□□□□ -1.62
TPM4-212ENST00000590180 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
TPM4-212ENST00000590180 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
TPM4-212ENST00000590180 SPRR2FQ96RM1 72 aa4.91□□□□□ -1.62
TPM4-212ENST00000590180 SEC61GP60059 68 aa4.87□□□□□ -1.63
TPM4-212ENST00000590180 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
TPM4-212ENST00000590180 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
TPM4-212ENST00000590180 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
TPM4-212ENST00000590180 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
TPM4-212ENST00000590180 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
TPM4-212ENST00000590180 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.63
TPM4-212ENST00000590180 MDN1Q9NU22 5596 aa4.83□□□□□ -1.64
TPM4-212ENST00000590180 H7BZZ5 65 aa4.83□□□□□ -1.64
TPM4-212ENST00000590180 SPRR2EP22531 72 aa4.83□□□□□ -1.64
TPM4-212ENST00000590180 SPRR2BP35325 72 aa4.83□□□□□ -1.64
TPM4-212ENST00000590180 SPRR2AP35326 72 aa4.83□□□□□ -1.64
TPM4-212ENST00000590180 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
TPM4-212ENST00000590180 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
TPM4-212ENST00000590180 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
TPM4-212ENST00000590180 ANAPC13Q9BS18 74 aa4.79□□□□□ -1.64
TPM4-212ENST00000590180 A0A0D9SG42 100 aa4.78□□□□□ -1.64
TPM4-212ENST00000590180 A0A1B0GU33 70 aa4.77□□□□□ -1.65
TPM4-212ENST00000590180 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
TPM4-212ENST00000590180 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
TPM4-212ENST00000590180 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
TPM4-212ENST00000590180 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
TPM4-212ENST00000590180 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
TPM4-212ENST00000590180 A0A1B0GU69 56 aa4.7□□□□□ -1.66
TPM4-212ENST00000590180 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
TPM4-212ENST00000590180 SPRR2DP22532 72 aa4.67□□□□□ -1.66
TPM4-212ENST00000590180 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
TPM4-212ENST00000590180 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
TPM4-212ENST00000590180 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
TPM4-212ENST00000590180 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
TPM4-212ENST00000590180 ATP5EP56381 51 aaPredicted RBP4.59□□□□□ -1.67
TPM4-212ENST00000590180 A8MU10 97 aa4.58□□□□□ -1.68
TPM4-212ENST00000590180 PRR15LQ9BU68 103 aa4.57□□□□□ -1.68
TPM4-212ENST00000590180 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
TPM4-212ENST00000590180 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
TPM4-212ENST00000590180 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
TPM4-212ENST00000590180 TMEM258P61165 79 aa4.49□□□□□ -1.69
TPM4-212ENST00000590180 MT1EP04732 61 aa4.48□□□□□ -1.69
TPM4-212ENST00000590180 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
TPM4-212ENST00000590180 TNP1P09430 55 aa4.44□□□□□ -1.7
TPM4-212ENST00000590180 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
TPM4-212ENST00000590180 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
TPM4-212ENST00000590180 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
TPM4-212ENST00000590180 UQCR11O14957 56 aa4.41□□□□□ -1.7
TPM4-212ENST00000590180 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
TPM4-212ENST00000590180 MT1GP13640 62 aa4.36□□□□□ -1.71
TPM4-212ENST00000590180 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
TPM4-212ENST00000590180 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
TPM4-212ENST00000590180 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
TPM4-212ENST00000590180 MT1LQ93083 61 aa4.29□□□□□ -1.72
TPM4-212ENST00000590180 V9GYY9 64 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms