RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 C9orf92A6NGG3 77 aa6.12□□□□□ -1.43
GFAP-216ENST00000589701 UQCR11O14957 56 aa6.12□□□□□ -1.43
GFAP-216ENST00000589701 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
GFAP-216ENST00000589701 PKHD1L1Q86WI1 4243 aa6.12□□□□□ -1.43
GFAP-216ENST00000589701 LINC00304Q8N9R0 145 aa6.11□□□□□ -1.43
GFAP-216ENST00000589701 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
GFAP-216ENST00000589701 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
GFAP-216ENST00000589701 CRIPTQ9P021 101 aa6.1□□□□□ -1.43
GFAP-216ENST00000589701 SPINK1P00995 79 aa6.08□□□□□ -1.44
GFAP-216ENST00000589701 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
GFAP-216ENST00000589701 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
GFAP-216ENST00000589701 Q5VSD8 79 aa6.01□□□□□ -1.45
GFAP-216ENST00000589701 ACYP2P14621 99 aa5.99□□□□□ -1.45
GFAP-216ENST00000589701 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
GFAP-216ENST00000589701 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
GFAP-216ENST00000589701 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
GFAP-216ENST00000589701 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.46
GFAP-216ENST00000589701 TNXBP22105 4242 aa5.95□□□□□ -1.46
GFAP-216ENST00000589701 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
GFAP-216ENST00000589701 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
GFAP-216ENST00000589701 J3QL48 77 aa5.9□□□□□ -1.46
GFAP-216ENST00000589701 LPAP08519 4548 aa5.87□□□□□ -1.47
GFAP-216ENST00000589701 H0YAA0 97 aa5.85□□□□□ -1.47
GFAP-216ENST00000589701 HERC1Q15751 4861 aa5.85□□□□□ -1.47
GFAP-216ENST00000589701 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
GFAP-216ENST00000589701 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
GFAP-216ENST00000589701 LRP2P98164 4655 aa5.8□□□□□ -1.48
GFAP-216ENST00000589701 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
GFAP-216ENST00000589701 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
GFAP-216ENST00000589701 K7ERS5 55 aa5.75□□□□□ -1.49
GFAP-216ENST00000589701 MT1HL1P0DM35 61 aa5.7□□□□□ -1.5
GFAP-216ENST00000589701 XP32Q5T750 250 aa5.7□□□□□ -1.5
GFAP-216ENST00000589701 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
GFAP-216ENST00000589701 HMCN2Q8NDA2 5059 aa5.65□□□□□ -1.5
GFAP-216ENST00000589701 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.51
GFAP-216ENST00000589701 RPL37P61927 97 aaKnown RBP5.63□□□□□ -1.51
GFAP-216ENST00000589701 MUC2Q02817 5179 aa5.61□□□□□ -1.51
GFAP-216ENST00000589701 A0A1B0GU33 70 aa5.59□□□□□ -1.52
GFAP-216ENST00000589701 H1FX-AS1Q4G0G2 97 aa5.53□□□□□ -1.52
GFAP-216ENST00000589701 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
GFAP-216ENST00000589701 A0A0D9SG42 100 aa5.49□□□□□ -1.53
GFAP-216ENST00000589701 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
GFAP-216ENST00000589701 S4R3F8 94 aa5.49□□□□□ -1.53
GFAP-216ENST00000589701 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
GFAP-216ENST00000589701 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
GFAP-216ENST00000589701 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
GFAP-216ENST00000589701 LCE2BO14633 110 aa5.37□□□□□ -1.55
GFAP-216ENST00000589701 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
GFAP-216ENST00000589701 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
GFAP-216ENST00000589701 KRTAP12-2P59991 146 aa5.28□□□□□ -1.56
GFAP-216ENST00000589701 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
GFAP-216ENST00000589701 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
GFAP-216ENST00000589701 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
GFAP-216ENST00000589701 PLAC4Q8WY50 150 aa5.21□□□□□ -1.58
GFAP-216ENST00000589701 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
GFAP-216ENST00000589701 M0QZ58 72 aa5.18□□□□□ -1.58
GFAP-216ENST00000589701 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
GFAP-216ENST00000589701 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
GFAP-216ENST00000589701 R4GN34 69 aa5.13□□□□□ -1.59
GFAP-216ENST00000589701 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
GFAP-216ENST00000589701 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
GFAP-216ENST00000589701 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
GFAP-216ENST00000589701 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
GFAP-216ENST00000589701 M0R2T5 61 aa4.88□□□□□ -1.63
GFAP-216ENST00000589701 MT1HP80294 61 aa4.82□□□□□ -1.64
GFAP-216ENST00000589701 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
GFAP-216ENST00000589701 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
GFAP-216ENST00000589701 MT1FP04733 61 aa4.72□□□□□ -1.65
GFAP-216ENST00000589701 INE1O15225 51 aa4.71□□□□□ -1.66
GFAP-216ENST00000589701 KRTAP10-10P60014 251 aa4.71□□□□□ -1.66
GFAP-216ENST00000589701 USH2AO75445 5202 aa4.7□□□□□ -1.66
GFAP-216ENST00000589701 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
GFAP-216ENST00000589701 MT2AP02795 61 aa4.69□□□□□ -1.66
GFAP-216ENST00000589701 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
GFAP-216ENST00000589701 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
GFAP-216ENST00000589701 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
GFAP-216ENST00000589701 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
GFAP-216ENST00000589701 TNP1P09430 55 aa4.59□□□□□ -1.68
GFAP-216ENST00000589701 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
GFAP-216ENST00000589701 KMT2DO14686 5537 aa4.52□□□□□ -1.69
GFAP-216ENST00000589701 MT1BP07438 61 aa4.49□□□□□ -1.69
GFAP-216ENST00000589701 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
GFAP-216ENST00000589701 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
GFAP-216ENST00000589701 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
GFAP-216ENST00000589701 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
GFAP-216ENST00000589701 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
GFAP-216ENST00000589701 MT1XP80297 61 aa4.43□□□□□ -1.7
GFAP-216ENST00000589701 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
GFAP-216ENST00000589701 SSPOA2VEC9 5147 aa4.4□□□□□ -1.7
GFAP-216ENST00000589701 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
GFAP-216ENST00000589701 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
GFAP-216ENST00000589701 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
GFAP-216ENST00000589701 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
GFAP-216ENST00000589701 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
GFAP-216ENST00000589701 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
GFAP-216ENST00000589701 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
GFAP-216ENST00000589701 KRTAP12-3P60328 96 aa4.21□□□□□ -1.73
GFAP-216ENST00000589701 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
GFAP-216ENST00000589701 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
GFAP-216ENST00000589701 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms