RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
DNMT1-215ENST00000588913 KTN1-AS1Q86SY8 53 aa9.54□□□□□ -0.88
DNMT1-215ENST00000588913 SPTSSBQ8NFR3 76 aa9.54□□□□□ -0.88
DNMT1-215ENST00000588913 KRTAP4-1Q9BYQ7 146 aa9.53□□□□□ -0.88
DNMT1-215ENST00000588913 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
DNMT1-215ENST00000588913 A6NN06 94 aa9.47□□□□□ -0.89
DNMT1-215ENST00000588913 A8MU10 97 aa9.47□□□□□ -0.89
DNMT1-215ENST00000588913 FAT4Q6V0I7 4981 aa9.44□□□□□ -0.9
DNMT1-215ENST00000588913 SPINK7P58062 85 aa9.42□□□□□ -0.9
DNMT1-215ENST00000588913 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
DNMT1-215ENST00000588913 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.91
DNMT1-215ENST00000588913 A0A1B0GU69 56 aa9.39□□□□□ -0.91
DNMT1-215ENST00000588913 C7orf65Q6ZTY9 151 aa9.38□□□□□ -0.91
DNMT1-215ENST00000588913 RPL37P61927 97 aaKnown RBP9.35□□□□□ -0.91
DNMT1-215ENST00000588913 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
DNMT1-215ENST00000588913 SPATA8Q6RVD6 105 aa9.29□□□□□ -0.92
DNMT1-215ENST00000588913 UQCR11O14957 56 aa9.28□□□□□ -0.92
DNMT1-215ENST00000588913 KRTAP19-2Q3LHN2 52 aa9.24□□□□□ -0.93
DNMT1-215ENST00000588913 LCE2AQ5TA79 106 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-215ENST00000588913 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
DNMT1-215ENST00000588913 C20orf166-AS1Q96NR2 134 aa9.22□□□□□ -0.93
DNMT1-215ENST00000588913 A8MUU9 505 aa9.21□□□□□ -0.94
DNMT1-215ENST00000588913 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.94
DNMT1-215ENST00000588913 LCE2CQ5TA81 110 aa9.2□□□□□ -0.94
DNMT1-215ENST00000588913 FLGP20930 4061 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-215ENST00000588913 MT1HP80294 61 aa9.01□□□□□ -0.97
DNMT1-215ENST00000588913 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
DNMT1-215ENST00000588913 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
DNMT1-215ENST00000588913 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
DNMT1-215ENST00000588913 A0A1B0GU33 70 aa8.85□□□□□ -0.99
DNMT1-215ENST00000588913 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
DNMT1-215ENST00000588913 LINC01554Q52M75 96 aa8.82□□□□□ -1
DNMT1-215ENST00000588913 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
DNMT1-215ENST00000588913 KRTAP3-1Q9BYR8 98 aa8.81□□□□□ -1
DNMT1-215ENST00000588913 LORP23490 312 aaPredicted RBP8.78□□□□□ -1
DNMT1-215ENST00000588913 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
DNMT1-215ENST00000588913 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
DNMT1-215ENST00000588913 H0YAA0 97 aa8.77□□□□□ -1.01
DNMT1-215ENST00000588913 K7ERS5 55 aa8.76□□□□□ -1.01
DNMT1-215ENST00000588913 KRTAP9-2Q9BYQ4 174 aa8.76□□□□□ -1.01
DNMT1-215ENST00000588913 M0R2T5 61 aa8.73□□□□□ -1.01
DNMT1-215ENST00000588913 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
DNMT1-215ENST00000588913 KRTAP9-8Q9BYQ0 159 aa8.59□□□□□ -1.03
DNMT1-215ENST00000588913 KRTAP25-1Q3LHN0 102 aa8.56□□□□□ -1.04
DNMT1-215ENST00000588913 MT2AP02795 61 aa8.49□□□□□ -1.05
DNMT1-215ENST00000588913 S4R3F8 94 aa8.48□□□□□ -1.05
DNMT1-215ENST00000588913 MT1FP04733 61 aa8.44□□□□□ -1.06
DNMT1-215ENST00000588913 ROMO1P60602 79 aa8.44□□□□□ -1.06
DNMT1-215ENST00000588913 FSIP2Q5CZC0 6907 aa8.4□□□□□ -1.06
DNMT1-215ENST00000588913 KRTAP9-6A0A140TA67 174 aa8.35□□□□□ -1.07
DNMT1-215ENST00000588913 KRTAP10-10P60014 251 aa8.3□□□□□ -1.08
DNMT1-215ENST00000588913 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
DNMT1-215ENST00000588913 H3BS24 57 aa8.3□□□□□ -1.08
DNMT1-215ENST00000588913 CRCT1Q9UGL9 99 aa8.29□□□□□ -1.08
DNMT1-215ENST00000588913 USH2AO75445 5202 aa8.28□□□□□ -1.08
DNMT1-215ENST00000588913 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
DNMT1-215ENST00000588913 LCE2BO14633 110 aa8.25□□□□□ -1.09
DNMT1-215ENST00000588913 A0A0D9SG42 100 aa8.22□□□□□ -1.09
DNMT1-215ENST00000588913 M0QZ58 72 aa8.22□□□□□ -1.09
DNMT1-215ENST00000588913 P0C880 135 aa8.19□□□□□ -1.1
DNMT1-215ENST00000588913 SSPOA2VEC9 5147 aa8.18□□□□□ -1.1
DNMT1-215ENST00000588913 CRIPTQ9P021 101 aa8.13□□□□□ -1.11
DNMT1-215ENST00000588913 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
DNMT1-215ENST00000588913 KRTAP12-2P59991 146 aa8.05□□□□□ -1.12
DNMT1-215ENST00000588913 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
DNMT1-215ENST00000588913 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
DNMT1-215ENST00000588913 FCGBPQ9Y6R7 5405 aaPredicted RBP7.92□□□□□ -1.14
DNMT1-215ENST00000588913 R4GN34 69 aa7.87□□□□□ -1.15
DNMT1-215ENST00000588913 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
DNMT1-215ENST00000588913 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
DNMT1-215ENST00000588913 KRTAP19-6Q3LI70 58 aa7.84□□□□□ -1.15
DNMT1-215ENST00000588913 MT1BP07438 61 aa7.82□□□□□ -1.16
DNMT1-215ENST00000588913 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
DNMT1-215ENST00000588913 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
DNMT1-215ENST00000588913 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
DNMT1-215ENST00000588913 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
DNMT1-215ENST00000588913 KRTAP4-6Q9BYQ5 205 aa7.65□□□□□ -1.18
DNMT1-215ENST00000588913 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
DNMT1-215ENST00000588913 MACF1Q9UPN3 7388 aaKnown RBP7.62□□□□□ -1.19
DNMT1-215ENST00000588913 KRTAP9-7A8MTY7 169 aa7.54□□□□□ -1.2
DNMT1-215ENST00000588913 NDUFAF8A1L188 74 aa7.54□□□□□ -1.2
DNMT1-215ENST00000588913 KRTAP10-5P60370 271 aa7.52□□□□□ -1.21
DNMT1-215ENST00000588913 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
DNMT1-215ENST00000588913 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
DNMT1-215ENST00000588913 SYNE2Q8WXH0 6885 aaKnown RBP7.47□□□□□ -1.21
DNMT1-215ENST00000588913 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
DNMT1-215ENST00000588913 MT1XP80297 61 aa7.38□□□□□ -1.23
DNMT1-215ENST00000588913 TNP1P09430 55 aa7.28□□□□□ -1.24
DNMT1-215ENST00000588913 KRTAP6-3Q3LI67 103 aa7.26□□□□□ -1.25
DNMT1-215ENST00000588913 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
DNMT1-215ENST00000588913 KMT2DO14686 5537 aa7.21□□□□□ -1.26
DNMT1-215ENST00000588913 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
DNMT1-215ENST00000588913 MUC12Q9UKN1 5478 aa7.09□□□□□ -1.27
DNMT1-215ENST00000588913 KRTAP10-7P60409 375 aaPredicted RBP7.07□□□□□ -1.28
DNMT1-215ENST00000588913 KRTAP5-9P26371 169 aa7.06□□□□□ -1.28
DNMT1-215ENST00000588913 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
DNMT1-215ENST00000588913 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
DNMT1-215ENST00000588913 A0A0A0MQY5 61 aa7.01□□□□□ -1.29
DNMT1-215ENST00000588913 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
DNMT1-215ENST00000588913 NEBP20929 6669 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms