RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 KMT2AQ03164 3969 aa3.42□□□□□ -1.86
AP000547.3-204ENST00000588548 APLNQ9ULZ1 77 aa3.4□□□□□ -1.86
AP000547.3-204ENST00000588548 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
AP000547.3-204ENST00000588548 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
AP000547.3-204ENST00000588548 KRTAP3-1Q9BYR8 98 aa3.39□□□□□ -1.87
AP000547.3-204ENST00000588548 A0A0D9SG42 100 aa3.38□□□□□ -1.87
AP000547.3-204ENST00000588548 FRAS1Q86XX4 4008 aa3.38□□□□□ -1.87
AP000547.3-204ENST00000588548 HECTD4Q9Y4D8 3996 aa3.38□□□□□ -1.87
AP000547.3-204ENST00000588548 PLAC4Q8WY50 150 aa3.38□□□□□ -1.87
AP000547.3-204ENST00000588548 DNAH8Q96JB1 4490 aa3.38□□□□□ -1.87
AP000547.3-204ENST00000588548 UBE2DNLQ8IWF7 75 aa3.37□□□□□ -1.87
AP000547.3-204ENST00000588548 S4R3F8 94 aa3.37□□□□□ -1.87
AP000547.3-204ENST00000588548 DNAH17Q9UFH2 4485 aa3.37□□□□□ -1.87
AP000547.3-204ENST00000588548 DMBT1Q9UGM3 2413 aaPredicted RBP3.36□□□□□ -1.87
AP000547.3-204ENST00000588548 KRTAP10-6P60371 365 aaPredicted RBP3.36□□□□□ -1.87
AP000547.3-204ENST00000588548 Q6ZRN7 208 aaPredicted RBP3.35□□□□□ -1.87
AP000547.3-204ENST00000588548 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.88
AP000547.3-204ENST00000588548 KMT2CQ8NEZ4 4911 aaKnown RBP3.33□□□□□ -1.88
AP000547.3-204ENST00000588548 SPACA4Q8TDM5 124 aa3.33□□□□□ -1.88
AP000547.3-204ENST00000588548 HYDINQ4G0P3 5121 aa3.32□□□□□ -1.88
AP000547.3-204ENST00000588548 DNAH11Q96DT5 4516 aa3.32□□□□□ -1.88
AP000547.3-204ENST00000588548 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
AP000547.3-204ENST00000588548 DNAH5Q8TE73 4624 aa3.31□□□□□ -1.88
AP000547.3-204ENST00000588548 PRO2289Q9P1D8 64 aa3.31□□□□□ -1.88
AP000547.3-204ENST00000588548 RYR3Q15413 4870 aa3.29□□□□□ -1.88
AP000547.3-204ENST00000588548 LRP1BQ9NZR2 4599 aa3.28□□□□□ -1.88
AP000547.3-204ENST00000588548 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
AP000547.3-204ENST00000588548 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
AP000547.3-204ENST00000588548 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
AP000547.3-204ENST00000588548 FAT2Q9NYQ8 4349 aa3.26□□□□□ -1.89
AP000547.3-204ENST00000588548 PKD1P98161 4303 aa3.25□□□□□ -1.89
AP000547.3-204ENST00000588548 SACSQ9NZJ4 4579 aa3.24□□□□□ -1.89
AP000547.3-204ENST00000588548 KRTAP13-2Q52LG2 175 aa3.24□□□□□ -1.89
AP000547.3-204ENST00000588548 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
AP000547.3-204ENST00000588548 RYR2Q92736 4967 aa3.23□□□□□ -1.89
AP000547.3-204ENST00000588548 KRTAP10-2P60368 255 aa3.22□□□□□ -1.89
AP000547.3-204ENST00000588548 PKHD1P08F94 4074 aa3.2□□□□□ -1.9
AP000547.3-204ENST00000588548 VPS13BQ7Z7G8 4022 aa3.2□□□□□ -1.9
AP000547.3-204ENST00000588548 EPPK1P58107 5090 aaKnown RBP3.19□□□□□ -1.9
AP000547.3-204ENST00000588548 R4GN34 69 aa3.18□□□□□ -1.9
AP000547.3-204ENST00000588548 KRTAP10-1P60331 282 aa3.17□□□□□ -1.9
AP000547.3-204ENST00000588548 KRTAP10-8P60410 259 aa3.17□□□□□ -1.9
AP000547.3-204ENST00000588548 FAT1Q14517 4588 aa3.15□□□□□ -1.91
AP000547.3-204ENST00000588548 DYNC1H1Q14204 4646 aaKnown RBP3.15□□□□□ -1.91
AP000547.3-204ENST00000588548 INE1O15225 51 aa3.13□□□□□ -1.91
AP000547.3-204ENST00000588548 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
AP000547.3-204ENST00000588548 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
AP000547.3-204ENST00000588548 KRTAP1-4P0C5Y4 121 aa3.1□□□□□ -1.91
AP000547.3-204ENST00000588548 APOBP04114 4563 aaKnown RBP3.1□□□□□ -1.91
AP000547.3-204ENST00000588548 M0QZ58 72 aa3.1□□□□□ -1.91
AP000547.3-204ENST00000588548 LCE4AQ5TA78 99 aa3.09□□□□□ -1.91
AP000547.3-204ENST00000588548 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
AP000547.3-204ENST00000588548 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
AP000547.3-204ENST00000588548 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
AP000547.3-204ENST00000588548 C9orf92A6NGG3 77 aa3.07□□□□□ -1.92
AP000547.3-204ENST00000588548 SMR3BP02814 79 aaPredicted RBP3.06□□□□□ -1.92
AP000547.3-204ENST00000588548 RPS29P62273 56 aaKnown RBP3.06□□□□□ -1.92
AP000547.3-204ENST00000588548 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
AP000547.3-204ENST00000588548 PKHD1L1Q86WI1 4243 aa3.04□□□□□ -1.92
AP000547.3-204ENST00000588548 LRP1Q07954 4544 aaKnown RBP3.02□□□□□ -1.93
AP000547.3-204ENST00000588548 RYR1P21817 5038 aa3□□□□□ -1.93
AP000547.3-204ENST00000588548 A0A1B0GVY2 172 aa2.99□□□□□ -1.93
AP000547.3-204ENST00000588548 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
AP000547.3-204ENST00000588548 MYCBP2O75592 4640 aa2.99□□□□□ -1.93
AP000547.3-204ENST00000588548 PCLOQ9Y6V0 5065 aa2.99□□□□□ -1.93
AP000547.3-204ENST00000588548 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
AP000547.3-204ENST00000588548 ABCA13Q86UQ4 5058 aa2.98□□□□□ -1.93
AP000547.3-204ENST00000588548 HSPG2P98160 4391 aa2.98□□□□□ -1.93
AP000547.3-204ENST00000588548 HERC2O95714 4834 aa2.97□□□□□ -1.93
AP000547.3-204ENST00000588548 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
AP000547.3-204ENST00000588548 TNXBP22105 4242 aa2.97□□□□□ -1.93
AP000547.3-204ENST00000588548 KRTAP9-7A8MTY7 169 aa2.91□□□□□ -1.94
AP000547.3-204ENST00000588548 LPAP08519 4548 aa2.88□□□□□ -1.95
AP000547.3-204ENST00000588548 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
AP000547.3-204ENST00000588548 HERC1Q15751 4861 aa2.87□□□□□ -1.95
AP000547.3-204ENST00000588548 Q5VSD8 79 aa2.86□□□□□ -1.95
AP000547.3-204ENST00000588548 LRP2P98164 4655 aa2.83□□□□□ -1.96
AP000547.3-204ENST00000588548 MT1HL1P0DM35 61 aa2.8□□□□□ -1.96
AP000547.3-204ENST00000588548 KRTAP9-3Q9BYQ3 159 aa2.78□□□□□ -1.96
AP000547.3-204ENST00000588548 TNP1P09430 55 aa2.77□□□□□ -1.97
AP000547.3-204ENST00000588548 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
AP000547.3-204ENST00000588548 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
AP000547.3-204ENST00000588548 HMCN2Q8NDA2 5059 aa2.71□□□□□ -1.98
AP000547.3-204ENST00000588548 MUC17Q685J3 4493 aa2.69□□□□□ -1.98
AP000547.3-204ENST00000588548 MUC2Q02817 5179 aa2.69□□□□□ -1.98
AP000547.3-204ENST00000588548 KRTAP10-10P60014 251 aa2.67□□□□□ -1.98
AP000547.3-204ENST00000588548 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
AP000547.3-204ENST00000588548 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
AP000547.3-204ENST00000588548 KRTAP19-2Q3LHN2 52 aa2.57□□□□□ -2
AP000547.3-204ENST00000588548 LCE3AQ5TA76 89 aa2.57□□□□□ -2
AP000547.3-204ENST00000588548 FAT4Q6V0I7 4981 aa2.56□□□□□ -2
AP000547.3-204ENST00000588548 KRTAP10-12P60413 245 aa2.54□□□□□ -2
AP000547.3-204ENST00000588548 KRTAP8-1Q8IUC2 63 aa2.52□□□□□ -2.01
AP000547.3-204ENST00000588548 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
AP000547.3-204ENST00000588548 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
AP000547.3-204ENST00000588548 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
AP000547.3-204ENST00000588548 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
AP000547.3-204ENST00000588548 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
AP000547.3-204ENST00000588548 KRTAP2-3P0C7H8 128 aa2.41□□□□□ -2.02
AP000547.3-204ENST00000588548 KRTAP2-4Q9BYR9 128 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms