RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 NOTCH2NLQ7Z3S9 236 aa2.98□□□□□ -1.93
TPM4-210ENST00000588507 C20orf197Q8N268 126 aa2.98□□□□□ -1.93
TPM4-210ENST00000588507 A0A087WVE0 104 aa2.97□□□□□ -1.93
TPM4-210ENST00000588507 A8MUU9 505 aa2.97□□□□□ -1.93
TPM4-210ENST00000588507 KRTAP16-1A8MUX0 517 aa2.97□□□□□ -1.93
TPM4-210ENST00000588507 KLKP1Q107X0 134 aa2.97□□□□□ -1.93
TPM4-210ENST00000588507 IGFL1Q6UW32 110 aa2.96□□□□□ -1.94
TPM4-210ENST00000588507 Q6ZVQ6 151 aa2.96□□□□□ -1.94
TPM4-210ENST00000588507 KCNQ1DNQ9H478 68 aa2.96□□□□□ -1.94
TPM4-210ENST00000588507 KRTAP4-8A0A0G2JLE6 195 aa2.95□□□□□ -1.94
TPM4-210ENST00000588507 NREPQ16612 68 aa2.95□□□□□ -1.94
TPM4-210ENST00000588507 Q6ZQY7 126 aa2.95□□□□□ -1.94
TPM4-210ENST00000588507 Q9BRP9 147 aa2.95□□□□□ -1.94
TPM4-210ENST00000588507 SPRR2GQ9BYE4 73 aa2.95□□□□□ -1.94
TPM4-210ENST00000588507 KRTAP4-8Q9BYQ9 185 aa2.95□□□□□ -1.94
TPM4-210ENST00000588507 TRBV7-4A0A0J9YYF1 115 aa2.94□□□□□ -1.94
TPM4-210ENST00000588507 ZNF73O43830 326 aaPredicted RBP2.94□□□□□ -1.94
TPM4-210ENST00000588507 ELOF1P60002 83 aaKnown RBP2.94□□□□□ -1.94
TPM4-210ENST00000588507 PRO0628Q9UI54 55 aa2.94□□□□□ -1.94
TPM4-210ENST00000588507 F8WEM9 126 aa2.93□□□□□ -1.94
TPM4-210ENST00000588507 H7BZZ5 65 aa2.93□□□□□ -1.94
TPM4-210ENST00000588507 BPY2O14599 106 aa2.93□□□□□ -1.94
TPM4-210ENST00000588507 DHRS4-AS1Q9P1J3 65 aa2.93□□□□□ -1.94
TPM4-210ENST00000588507 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
TPM4-210ENST00000588507 ST20-AS1Q8NBB2 130 aa2.92□□□□□ -1.94
TPM4-210ENST00000588507 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
TPM4-210ENST00000588507 TMEM254Q8TBM7 123 aa2.91□□□□□ -1.94
TPM4-210ENST00000588507 A0A1W2PNM2 257 aa2.9□□□□□ -1.95
TPM4-210ENST00000588507 NDUFB1O75438 58 aa2.9□□□□□ -1.95
TPM4-210ENST00000588507 Q6ZRX8 168 aa2.9□□□□□ -1.95
TPM4-210ENST00000588507 CYSTM1Q9H1C7 97 aa2.9□□□□□ -1.95
TPM4-210ENST00000588507 SPRR1BP22528 89 aa2.89□□□□□ -1.95
TPM4-210ENST00000588507 SNURFQ9Y675 71 aa2.89□□□□□ -1.95
TPM4-210ENST00000588507 V9GYY9 64 aa2.89□□□□□ -1.95
TPM4-210ENST00000588507 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
TPM4-210ENST00000588507 IGLV5-48A0A075B6I7 105 aa2.87□□□□□ -1.95
TPM4-210ENST00000588507 IGKV4-1P06312 121 aa2.87□□□□□ -1.95
TPM4-210ENST00000588507 H3BPC8 53 aa2.86□□□□□ -1.95
TPM4-210ENST00000588507 MP68P56378 58 aa2.86□□□□□ -1.95
TPM4-210ENST00000588507 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
TPM4-210ENST00000588507 OCR1Q9BZK8 76 aa2.86□□□□□ -1.95
TPM4-210ENST00000588507 DEFB105AQ8NG35 78 aa2.85□□□□□ -1.95
TPM4-210ENST00000588507 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
TPM4-210ENST00000588507 hDV103S1A0JD37 113 aa2.84□□□□□ -1.95
TPM4-210ENST00000588507 Q1T7F1 81 aa2.84□□□□□ -1.95
TPM4-210ENST00000588507 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
TPM4-210ENST00000588507 CYP4F30PQ9H0H9 118 aa2.83□□□□□ -1.96
TPM4-210ENST00000588507 HCG22E2RYF7 251 aa2.82□□□□□ -1.96
TPM4-210ENST00000588507 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
TPM4-210ENST00000588507 PRR15Q8IV56 129 aa2.81□□□□□ -1.96
TPM4-210ENST00000588507 Q8N9L7 120 aa2.81□□□□□ -1.96
TPM4-210ENST00000588507 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
TPM4-210ENST00000588507 MT1XP80297 61 aa2.8□□□□□ -1.96
TPM4-210ENST00000588507 C1orf64Q8NEQ6 169 aa2.79□□□□□ -1.96
TPM4-210ENST00000588507 DSCR10P59022 87 aa2.78□□□□□ -1.96
TPM4-210ENST00000588507 TP53AIP1Q9HCN2 124 aa2.78□□□□□ -1.96
TPM4-210ENST00000588507 TRAV22A0A0B4J277 110 aa2.77□□□□□ -1.97
TPM4-210ENST00000588507 H0Y9P7 68 aa2.77□□□□□ -1.97
TPM4-210ENST00000588507 K7EQZ3 153 aa2.77□□□□□ -1.97
TPM4-210ENST00000588507 CASC2Q6XLA1 102 aa2.77□□□□□ -1.97
TPM4-210ENST00000588507 LINC00208Q96KT6 92 aa2.77□□□□□ -1.97
TPM4-210ENST00000588507 SPINK7P58062 85 aa2.76□□□□□ -1.97
TPM4-210ENST00000588507 SEC61GP60059 68 aa2.76□□□□□ -1.97
TPM4-210ENST00000588507 PMAIP1Q13794 54 aa2.76□□□□□ -1.97
TPM4-210ENST00000588507 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
TPM4-210ENST00000588507 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
TPM4-210ENST00000588507 H1FX-AS1Q4G0G2 97 aa2.75□□□□□ -1.97
TPM4-210ENST00000588507 WFDC13Q8IUB5 93 aa2.75□□□□□ -1.97
TPM4-210ENST00000588507 A0A087WSZ3 146 aa2.74□□□□□ -1.97
TPM4-210ENST00000588507 NDUFS5O43920 106 aa2.74□□□□□ -1.97
TPM4-210ENST00000588507 CHKB-CPT1BH3BT56 60 aa2.73□□□□□ -1.97
TPM4-210ENST00000588507 PSPHP1O15172 72 aa2.73□□□□□ -1.97
TPM4-210ENST00000588507 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
TPM4-210ENST00000588507 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
TPM4-210ENST00000588507 A6NED7 52 aa2.71□□□□□ -1.98
TPM4-210ENST00000588507 A8MUN3 132 aa2.71□□□□□ -1.98
TPM4-210ENST00000588507 PRR15LQ9BU68 103 aa2.71□□□□□ -1.98
TPM4-210ENST00000588507 LINC00472Q9H8W2 130 aa2.71□□□□□ -1.98
TPM4-210ENST00000588507 LOC101927531A0A1B0GV80 90 aa2.7□□□□□ -1.98
TPM4-210ENST00000588507 DEFB116Q30KQ4 102 aa2.7□□□□□ -1.98
TPM4-210ENST00000588507 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
TPM4-210ENST00000588507 COA5Q86WW8 74 aa2.7□□□□□ -1.98
TPM4-210ENST00000588507 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
TPM4-210ENST00000588507 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
TPM4-210ENST00000588507 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
TPM4-210ENST00000588507 CDC42SE1Q9NRR8 79 aa2.69□□□□□ -1.98
TPM4-210ENST00000588507 MMP24-AS1A0A0U1RRL7 71 aa2.68□□□□□ -1.98
TPM4-210ENST00000588507 LINC01558Q9Y6Z2 57 aa2.68□□□□□ -1.98
TPM4-210ENST00000588507 A0A1B0GVX0 72 aa2.67□□□□□ -1.98
TPM4-210ENST00000588507 ACYP2P14621 99 aa2.67□□□□□ -1.98
TPM4-210ENST00000588507 LINC00313P59037 77 aa2.67□□□□□ -1.98
TPM4-210ENST00000588507 SPTSSBQ8NFR3 76 aa2.67□□□□□ -1.98
TPM4-210ENST00000588507 MRPL34Q9BQ48 92 aaKnown RBP2.67□□□□□ -1.98
TPM4-210ENST00000588507 C8orf17Q9NRJ1 99 aa2.67□□□□□ -1.98
TPM4-210ENST00000588507 C8orf87E5RJ46 101 aa2.66□□□□□ -1.98
TPM4-210ENST00000588507 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
TPM4-210ENST00000588507 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
TPM4-210ENST00000588507 IGHV6-1A0A0B4J1U7 121 aa2.65□□□□□ -1.99
TPM4-210ENST00000588507 C7orf65Q6ZTY9 151 aa2.64□□□□□ -1.99
TPM4-210ENST00000588507 LCA10Q71F78 164 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms