RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 KRTAP19-8Q3LI54 63 aa9.77□□□□□ -0.85
CIRBP-219ENST00000588411 A6NN06 94 aa9.76□□□□□ -0.85
CIRBP-219ENST00000588411 MT1BP07438 61 aa9.76□□□□□ -0.85
CIRBP-219ENST00000588411 LINC00643Q86TS7 51 aa9.75□□□□□ -0.85
CIRBP-219ENST00000588411 A0A087WVE0 104 aa9.73□□□□□ -0.85
CIRBP-219ENST00000588411 KRTAP6-3Q3LI67 103 aa9.73□□□□□ -0.85
CIRBP-219ENST00000588411 CRIPTQ9P021 101 aa9.73□□□□□ -0.85
CIRBP-219ENST00000588411 NDUFC1O43677 76 aa9.72□□□□□ -0.85
CIRBP-219ENST00000588411 IMUPQ9GZP8 106 aa9.72□□□□□ -0.85
CIRBP-219ENST00000588411 A8MUN3 132 aa9.68□□□□□ -0.86
CIRBP-219ENST00000588411 MP68P56378 58 aa9.63□□□□□ -0.87
CIRBP-219ENST00000588411 LINC00208Q96KT6 92 aa9.63□□□□□ -0.87
CIRBP-219ENST00000588411 H0YAA0 97 aa9.61□□□□□ -0.87
CIRBP-219ENST00000588411 KRTAP10-5P60370 271 aa9.59□□□□□ -0.87
CIRBP-219ENST00000588411 OCR1Q9BZK8 76 aa9.56□□□□□ -0.88
CIRBP-219ENST00000588411 A0A1B0GV90 55 aa9.53□□□□□ -0.88
CIRBP-219ENST00000588411 J3QR89 54 aa9.51□□□□□ -0.89
CIRBP-219ENST00000588411 ADM2Q7Z4H4 148 aa9.5□□□□□ -0.89
CIRBP-219ENST00000588411 H3BPC8 53 aa9.46□□□□□ -0.9
CIRBP-219ENST00000588411 SCGB1A1P11684 91 aa9.42□□□□□ -0.9
CIRBP-219ENST00000588411 NEBP20929 6669 aa9.37□□□□□ -0.91
CIRBP-219ENST00000588411 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
CIRBP-219ENST00000588411 MUC12Q9UKN1 5478 aa9.35□□□□□ -0.91
CIRBP-219ENST00000588411 DMAC1Q96GE9 116 aa9.33□□□□□ -0.92
CIRBP-219ENST00000588411 PRO2289Q9P1D8 64 aa9.3□□□□□ -0.92
CIRBP-219ENST00000588411 R4GN34 69 aa9.3□□□□□ -0.92
CIRBP-219ENST00000588411 PLAC4Q8WY50 150 aa9.29□□□□□ -0.92
CIRBP-219ENST00000588411 KRTAP5-9P26371 169 aa9.25□□□□□ -0.93
CIRBP-219ENST00000588411 P0C880 135 aa9.22□□□□□ -0.93
CIRBP-219ENST00000588411 M0QZ58 72 aa9.2□□□□□ -0.94
CIRBP-219ENST00000588411 TRAV7A0A075B6U4 112 aa9.17□□□□□ -0.94
CIRBP-219ENST00000588411 KMT2DO14686 5537 aa9.15□□□□□ -0.94
CIRBP-219ENST00000588411 MT1XP80297 61 aa9.15□□□□□ -0.94
CIRBP-219ENST00000588411 SMIM20Q8N5G0 67 aa9.15□□□□□ -0.94
CIRBP-219ENST00000588411 ACYP2P14621 99 aa9.13□□□□□ -0.95
CIRBP-219ENST00000588411 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
CIRBP-219ENST00000588411 MDN1Q9NU22 5596 aa9.09□□□□□ -0.95
CIRBP-219ENST00000588411 SPTSSBQ8NFR3 76 aa9.09□□□□□ -0.95
CIRBP-219ENST00000588411 K7ERU9 68 aa9.07□□□□□ -0.96
CIRBP-219ENST00000588411 MT-ATP8P03928 68 aa9.07□□□□□ -0.96
CIRBP-219ENST00000588411 LINC01554Q52M75 96 aa9.07□□□□□ -0.96
CIRBP-219ENST00000588411 KRTAP20-1Q3LI63 56 aa9.06□□□□□ -0.96
CIRBP-219ENST00000588411 CHKB-CPT1BH3BT56 60 aa9□□□□□ -0.97
CIRBP-219ENST00000588411 SPRR2FQ96RM1 72 aa8.99□□□□□ -0.97
CIRBP-219ENST00000588411 KRTAP12-2P59991 146 aa8.98□□□□□ -0.97
CIRBP-219ENST00000588411 KRTAP8-1Q8IUC2 63 aa8.96□□□□□ -0.98
CIRBP-219ENST00000588411 SNURFQ9Y675 71 aa8.89□□□□□ -0.99
CIRBP-219ENST00000588411 SPRR2EP22531 72 aa8.88□□□□□ -0.99
CIRBP-219ENST00000588411 SPRR2BP35325 72 aa8.88□□□□□ -0.99
CIRBP-219ENST00000588411 SPRR2AP35326 72 aa8.88□□□□□ -0.99
CIRBP-219ENST00000588411 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
CIRBP-219ENST00000588411 KRTAP2-3P0C7H8 128 aa8.8□□□□□ -1
CIRBP-219ENST00000588411 KRTAP2-4Q9BYR9 128 aa8.8□□□□□ -1
CIRBP-219ENST00000588411 SERP2Q8N6R1 65 aa8.76□□□□□ -1.01
CIRBP-219ENST00000588411 KRTAP4-8A0A0G2JLE6 195 aa8.74□□□□□ -1.01
CIRBP-219ENST00000588411 KRTAP4-8Q9BYQ9 185 aa8.74□□□□□ -1.01
CIRBP-219ENST00000588411 KRTAP10-7P60409 375 aaPredicted RBP8.72□□□□□ -1.01
CIRBP-219ENST00000588411 LCE1AQ5T7P2 110 aa8.71□□□□□ -1.02
CIRBP-219ENST00000588411 KRTAP10-12P60413 245 aa8.7□□□□□ -1.02
CIRBP-219ENST00000588411 SPRR2DP22532 72 aa8.59□□□□□ -1.03
CIRBP-219ENST00000588411 COA5Q86WW8 74 aa8.57□□□□□ -1.04
CIRBP-219ENST00000588411 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
CIRBP-219ENST00000588411 CAMK2N1Q7Z7J9 78 aa8.56□□□□□ -1.04
CIRBP-219ENST00000588411 SEC61GP60059 68 aa8.54□□□□□ -1.04
CIRBP-219ENST00000588411 KRTAP2-2Q9BYT5 123 aa8.52□□□□□ -1.05
CIRBP-219ENST00000588411 KRTAP2-1Q9BYU5 128 aa8.52□□□□□ -1.05
CIRBP-219ENST00000588411 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
CIRBP-219ENST00000588411 COX7CP15954 63 aa8.45□□□□□ -1.06
CIRBP-219ENST00000588411 A0A0D9SG42 100 aa8.37□□□□□ -1.07
CIRBP-219ENST00000588411 LCE3BQ5TA77 95 aa8.34□□□□□ -1.07
CIRBP-219ENST00000588411 A0A1B0GU33 70 aa8.33□□□□□ -1.08
CIRBP-219ENST00000588411 H7BZZ5 65 aa8.32□□□□□ -1.08
CIRBP-219ENST00000588411 SPATA8Q6RVD6 105 aa8.3□□□□□ -1.08
CIRBP-219ENST00000588411 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.09
CIRBP-219ENST00000588411 CYSTM1Q9H1C7 97 aa8.25□□□□□ -1.09
CIRBP-219ENST00000588411 A0A1B0GU69 56 aa8.18□□□□□ -1.1
CIRBP-219ENST00000588411 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
CIRBP-219ENST00000588411 KRTAP19-7Q3SYF9 63 aa8.16□□□□□ -1.1
CIRBP-219ENST00000588411 SMIM26A0A096LP01 95 aa8.14□□□□□ -1.11
CIRBP-219ENST00000588411 ANAPC13Q9BS18 74 aa8.13□□□□□ -1.11
CIRBP-219ENST00000588411 MT1EP04732 61 aa8.12□□□□□ -1.11
CIRBP-219ENST00000588411 LCE5AQ5TCM9 118 aa8.09□□□□□ -1.11
CIRBP-219ENST00000588411 KRTAP19-3Q7Z4W3 81 aa8.09□□□□□ -1.11
CIRBP-219ENST00000588411 A8MU10 97 aa7.97□□□□□ -1.13
CIRBP-219ENST00000588411 KRTAP19-5Q3LI72 72 aa7.97□□□□□ -1.13
CIRBP-219ENST00000588411 PRR15LQ9BU68 103 aa7.96□□□□□ -1.14
CIRBP-219ENST00000588411 ATP5EP56381 51 aaPredicted RBP7.95□□□□□ -1.14
CIRBP-219ENST00000588411 CCDC179H3BU77 68 aa7.91□□□□□ -1.14
CIRBP-219ENST00000588411 MT1GP13640 62 aa7.9□□□□□ -1.14
CIRBP-219ENST00000588411 DSTQ03001 7570 aaKnown RBP7.89□□□□□ -1.15
CIRBP-219ENST00000588411 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
CIRBP-219ENST00000588411 TNP1P09430 55 aa7.87□□□□□ -1.15
CIRBP-219ENST00000588411 C10orf95Q9H7T3 257 aa7.8□□□□□ -1.16
CIRBP-219ENST00000588411 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
CIRBP-219ENST00000588411 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
CIRBP-219ENST00000588411 MT1LQ93083 61 aa7.75□□□□□ -1.17
CIRBP-219ENST00000588411 MT1MQ8N339 61 aa7.74□□□□□ -1.17
CIRBP-219ENST00000588411 KRTAP4-9Q9BYQ8 210 aa7.73□□□□□ -1.17
CIRBP-219ENST00000588411 GPR98Q8WXG9 6306 aa7.69□□□□□ -1.18
CIRBP-219ENST00000588411 TMEM258P61165 79 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms