RNA–Protein interactions for RNA: ENST00000587872.1

BCAS3-214, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-214ENST00000587872 SSBP3-AS1Q7Z2R9 100 aa6.5□□□□□ -1.37
BCAS3-214ENST00000587872 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
BCAS3-214ENST00000587872 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
BCAS3-214ENST00000587872 A8MUU9 505 aa6.49□□□□□ -1.37
BCAS3-214ENST00000587872 IGKV2D-30A0A075B6S6 120 aa6.49□□□□□ -1.37
BCAS3-214ENST00000587872 IGKV2-30P06310 120 aa6.49□□□□□ -1.37
BCAS3-214ENST00000587872 TYMSOSQ8TAI1 123 aa6.49□□□□□ -1.37
BCAS3-214ENST00000587872 TNXBP22105 4242 aa6.49□□□□□ -1.37
BCAS3-214ENST00000587872 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
BCAS3-214ENST00000587872 H0YAA0 97 aa6.47□□□□□ -1.37
BCAS3-214ENST00000587872 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
BCAS3-214ENST00000587872 RPS29P62273 56 aaKnown RBP6.39□□□□□ -1.39
BCAS3-214ENST00000587872 DMBT1Q9UGM3 2413 aaPredicted RBP6.38□□□□□ -1.39
BCAS3-214ENST00000587872 J3QL48 77 aa6.38□□□□□ -1.39
BCAS3-214ENST00000587872 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
BCAS3-214ENST00000587872 NDUFAF8A1L188 74 aa6.29□□□□□ -1.4
BCAS3-214ENST00000587872 A0A1B0GU33 70 aa6.27□□□□□ -1.41
BCAS3-214ENST00000587872 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
BCAS3-214ENST00000587872 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
BCAS3-214ENST00000587872 TPRXLQ17RH7 258 aa6.21□□□□□ -1.42
BCAS3-214ENST00000587872 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.42
BCAS3-214ENST00000587872 HERC1Q15751 4861 aa6.19□□□□□ -1.42
BCAS3-214ENST00000587872 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
BCAS3-214ENST00000587872 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
BCAS3-214ENST00000587872 COX6B2Q6YFQ2 88 aa6.12□□□□□ -1.43
BCAS3-214ENST00000587872 A0A0D9SG42 100 aa6.11□□□□□ -1.43
BCAS3-214ENST00000587872 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
BCAS3-214ENST00000587872 HMCN2Q8NDA2 5059 aa6.1□□□□□ -1.43
BCAS3-214ENST00000587872 K7ERS5 55 aa6.09□□□□□ -1.43
BCAS3-214ENST00000587872 LPAP08519 4548 aa6.06□□□□□ -1.44
BCAS3-214ENST00000587872 C9orf92A6NGG3 77 aa6.05□□□□□ -1.44
BCAS3-214ENST00000587872 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
BCAS3-214ENST00000587872 XP32Q5T750 250 aa6.03□□□□□ -1.44
BCAS3-214ENST00000587872 LRP2P98164 4655 aa6.01□□□□□ -1.45
BCAS3-214ENST00000587872 RPL37P61927 97 aaKnown RBP5.97□□□□□ -1.45
BCAS3-214ENST00000587872 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
BCAS3-214ENST00000587872 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
BCAS3-214ENST00000587872 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
BCAS3-214ENST00000587872 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.46
BCAS3-214ENST00000587872 KRTAP12-2P59991 146 aa5.86□□□□□ -1.47
BCAS3-214ENST00000587872 UBR4Q5T4S7 5183 aa5.85□□□□□ -1.47
BCAS3-214ENST00000587872 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
BCAS3-214ENST00000587872 S4R3F8 94 aa5.83□□□□□ -1.48
BCAS3-214ENST00000587872 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
BCAS3-214ENST00000587872 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
BCAS3-214ENST00000587872 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
BCAS3-214ENST00000587872 MUC2Q02817 5179 aa5.73□□□□□ -1.49
BCAS3-214ENST00000587872 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
BCAS3-214ENST00000587872 KRTAP19-2Q3LHN2 52 aa5.62□□□□□ -1.51
BCAS3-214ENST00000587872 PLAC4Q8WY50 150 aa5.59□□□□□ -1.52
BCAS3-214ENST00000587872 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
BCAS3-214ENST00000587872 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
BCAS3-214ENST00000587872 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
BCAS3-214ENST00000587872 MT1HP80294 61 aa5.46□□□□□ -1.54
BCAS3-214ENST00000587872 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
BCAS3-214ENST00000587872 M0QZ58 72 aa5.36□□□□□ -1.55
BCAS3-214ENST00000587872 M0R2T5 61 aa5.35□□□□□ -1.55
BCAS3-214ENST00000587872 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
BCAS3-214ENST00000587872 R4GN34 69 aa5.27□□□□□ -1.57
BCAS3-214ENST00000587872 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
BCAS3-214ENST00000587872 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
BCAS3-214ENST00000587872 MT2AP02795 61 aa5.19□□□□□ -1.58
BCAS3-214ENST00000587872 MT1FP04733 61 aa5.15□□□□□ -1.58
BCAS3-214ENST00000587872 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
BCAS3-214ENST00000587872 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
BCAS3-214ENST00000587872 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
BCAS3-214ENST00000587872 PRO2289Q9P1D8 64 aa5.04□□□□□ -1.6
BCAS3-214ENST00000587872 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
BCAS3-214ENST00000587872 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
BCAS3-214ENST00000587872 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
BCAS3-214ENST00000587872 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
BCAS3-214ENST00000587872 LCE2BO14633 110 aa4.94□□□□□ -1.62
BCAS3-214ENST00000587872 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
BCAS3-214ENST00000587872 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.63
BCAS3-214ENST00000587872 TNP1P09430 55 aa4.86□□□□□ -1.63
BCAS3-214ENST00000587872 USH2AO75445 5202 aa4.85□□□□□ -1.63
BCAS3-214ENST00000587872 MT1BP07438 61 aa4.83□□□□□ -1.64
BCAS3-214ENST00000587872 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
BCAS3-214ENST00000587872 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
BCAS3-214ENST00000587872 INE1O15225 51 aa4.72□□□□□ -1.65
BCAS3-214ENST00000587872 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
BCAS3-214ENST00000587872 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
BCAS3-214ENST00000587872 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
BCAS3-214ENST00000587872 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
BCAS3-214ENST00000587872 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
BCAS3-214ENST00000587872 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
BCAS3-214ENST00000587872 MT1XP80297 61 aa4.62□□□□□ -1.67
BCAS3-214ENST00000587872 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
BCAS3-214ENST00000587872 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
BCAS3-214ENST00000587872 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
BCAS3-214ENST00000587872 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
BCAS3-214ENST00000587872 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.71
BCAS3-214ENST00000587872 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
BCAS3-214ENST00000587872 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
BCAS3-214ENST00000587872 KMT2DO14686 5537 aa4.3□□□□□ -1.72
BCAS3-214ENST00000587872 KRTAP4-8A0A0G2JLE6 195 aa4.29□□□□□ -1.72
BCAS3-214ENST00000587872 KRTAP4-8Q9BYQ9 185 aa4.29□□□□□ -1.72
BCAS3-214ENST00000587872 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
BCAS3-214ENST00000587872 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
BCAS3-214ENST00000587872 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms