RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 MP68P56378 58 aa10.72□□□□□ -0.69
CHAF1A-205ENST00000587580 KLKP1Q107X0 134 aa10.68□□□□□ -0.7
CHAF1A-205ENST00000587580 A8MUN3 132 aa10.64□□□□□ -0.71
CHAF1A-205ENST00000587580 KRTAP9-7A8MTY7 169 aa10.61□□□□□ -0.71
CHAF1A-205ENST00000587580 SCGB1A1P11684 91 aa10.61□□□□□ -0.71
CHAF1A-205ENST00000587580 NDUFC1O43677 76 aa10.6□□□□□ -0.71
CHAF1A-205ENST00000587580 H3BPC8 53 aa10.57□□□□□ -0.72
CHAF1A-205ENST00000587580 SPRR2GQ9BYE4 73 aa10.57□□□□□ -0.72
CHAF1A-205ENST00000587580 IMUPQ9GZP8 106 aa10.54□□□□□ -0.72
CHAF1A-205ENST00000587580 K7ERU9 68 aa10.51□□□□□ -0.73
CHAF1A-205ENST00000587580 Q5VV11 94 aa10.51□□□□□ -0.73
CHAF1A-205ENST00000587580 MT-ATP8P03928 68 aa10.49□□□□□ -0.73
CHAF1A-205ENST00000587580 MT1BP07438 61 aa10.49□□□□□ -0.73
CHAF1A-205ENST00000587580 KRTAP19-8Q3LI54 63 aa10.49□□□□□ -0.73
CHAF1A-205ENST00000587580 H0YAA0 97 aa10.46□□□□□ -0.73
CHAF1A-205ENST00000587580 CRIPTQ9P021 101 aa10.46□□□□□ -0.73
CHAF1A-205ENST00000587580 DMAC1Q96GE9 116 aa10.39□□□□□ -0.75
CHAF1A-205ENST00000587580 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
CHAF1A-205ENST00000587580 MACF1Q9UPN3 7388 aaKnown RBP10.37□□□□□ -0.75
CHAF1A-205ENST00000587580 SMIM20Q8N5G0 67 aa10.34□□□□□ -0.75
CHAF1A-205ENST00000587580 A6NN06 94 aa10.33□□□□□ -0.76
CHAF1A-205ENST00000587580 TRAV7A0A075B6U4 112 aa10.32□□□□□ -0.76
CHAF1A-205ENST00000587580 SYNE2Q8WXH0 6885 aaKnown RBP10.23□□□□□ -0.77
CHAF1A-205ENST00000587580 KRTAP10-5P60370 271 aa10.22□□□□□ -0.77
CHAF1A-205ENST00000587580 ACYP2P14621 99 aa10.16□□□□□ -0.78
CHAF1A-205ENST00000587580 P0C880 135 aa10.15□□□□□ -0.78
CHAF1A-205ENST00000587580 C20orf197Q8N268 126 aa10.15□□□□□ -0.78
CHAF1A-205ENST00000587580 SNURFQ9Y675 71 aa10.13□□□□□ -0.79
CHAF1A-205ENST00000587580 KRTAP6-3Q3LI67 103 aa10.12□□□□□ -0.79
CHAF1A-205ENST00000587580 R4GN34 69 aa10.11□□□□□ -0.79
CHAF1A-205ENST00000587580 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
CHAF1A-205ENST00000587580 M0QZ58 72 aa10.04□□□□□ -0.8
CHAF1A-205ENST00000587580 SERP2Q8N6R1 65 aa10.02□□□□□ -0.81
CHAF1A-205ENST00000587580 SPTSSBQ8NFR3 76 aa10.02□□□□□ -0.81
CHAF1A-205ENST00000587580 CHKB-CPT1BH3BT56 60 aa10□□□□□ -0.81
CHAF1A-205ENST00000587580 PLAC4Q8WY50 150 aa9.97□□□□□ -0.81
CHAF1A-205ENST00000587580 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
CHAF1A-205ENST00000587580 LINC01554Q52M75 96 aa9.9□□□□□ -0.82
CHAF1A-205ENST00000587580 PRO2289Q9P1D8 64 aa9.9□□□□□ -0.82
CHAF1A-205ENST00000587580 MT1XP80297 61 aa9.87□□□□□ -0.83
CHAF1A-205ENST00000587580 COX7CP15954 63 aa9.75□□□□□ -0.85
CHAF1A-205ENST00000587580 KRTAP5-9P26371 169 aa9.71□□□□□ -0.86
CHAF1A-205ENST00000587580 COA5Q86WW8 74 aa9.69□□□□□ -0.86
CHAF1A-205ENST00000587580 MUC12Q9UKN1 5478 aa9.64□□□□□ -0.87
CHAF1A-205ENST00000587580 NEBP20929 6669 aa9.62□□□□□ -0.87
CHAF1A-205ENST00000587580 KRTAP12-2P59991 146 aa9.6□□□□□ -0.87
CHAF1A-205ENST00000587580 CYSTM1Q9H1C7 97 aa9.59□□□□□ -0.87
CHAF1A-205ENST00000587580 H7BZZ5 65 aa9.58□□□□□ -0.88
CHAF1A-205ENST00000587580 KMT2DO14686 5537 aa9.56□□□□□ -0.88
CHAF1A-205ENST00000587580 KRTAP13-4Q3LI77 160 aa9.54□□□□□ -0.88
CHAF1A-205ENST00000587580 KRTAP8-1Q8IUC2 63 aa9.5□□□□□ -0.89
CHAF1A-205ENST00000587580 SPRR2FQ96RM1 72 aa9.49□□□□□ -0.89
CHAF1A-205ENST00000587580 ANAPC13Q9BS18 74 aa9.48□□□□□ -0.89
CHAF1A-205ENST00000587580 SEC61GP60059 68 aa9.47□□□□□ -0.89
CHAF1A-205ENST00000587580 SERP1Q9Y6X1 66 aa9.45□□□□□ -0.9
CHAF1A-205ENST00000587580 KRTAP10-7P60409 375 aaPredicted RBP9.44□□□□□ -0.9
CHAF1A-205ENST00000587580 KRTAP4-8A0A0G2JLE6 195 aa9.4□□□□□ -0.9
CHAF1A-205ENST00000587580 KRTAP4-8Q9BYQ9 185 aa9.4□□□□□ -0.9
CHAF1A-205ENST00000587580 MDN1Q9NU22 5596 aa9.38□□□□□ -0.91
CHAF1A-205ENST00000587580 KRTAP10-12P60413 245 aa9.37□□□□□ -0.91
CHAF1A-205ENST00000587580 SPRR2EP22531 72 aa9.32□□□□□ -0.92
CHAF1A-205ENST00000587580 SPRR2BP35325 72 aa9.32□□□□□ -0.92
CHAF1A-205ENST00000587580 SPRR2AP35326 72 aa9.32□□□□□ -0.92
CHAF1A-205ENST00000587580 KRTAP20-1Q3LI63 56 aa9.32□□□□□ -0.92
CHAF1A-205ENST00000587580 CAMK2N1Q7Z7J9 78 aa9.32□□□□□ -0.92
CHAF1A-205ENST00000587580 A0A0D9SG42 100 aa9.29□□□□□ -0.92
CHAF1A-205ENST00000587580 CCDC179H3BU77 68 aa9.29□□□□□ -0.92
CHAF1A-205ENST00000587580 A0A1B0GU33 70 aa9.28□□□□□ -0.92
CHAF1A-205ENST00000587580 SPATA8Q6RVD6 105 aa9.28□□□□□ -0.92
CHAF1A-205ENST00000587580 A0A1B0GU69 56 aa9.19□□□□□ -0.94
CHAF1A-205ENST00000587580 LCE1AQ5T7P2 110 aa9.19□□□□□ -0.94
CHAF1A-205ENST00000587580 ATP5EP56381 51 aaPredicted RBP9.14□□□□□ -0.95
CHAF1A-205ENST00000587580 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
CHAF1A-205ENST00000587580 KRTAP2-3P0C7H8 128 aa9.09□□□□□ -0.95
CHAF1A-205ENST00000587580 KRTAP2-4Q9BYR9 128 aa9.09□□□□□ -0.95
CHAF1A-205ENST00000587580 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
CHAF1A-205ENST00000587580 SMIM26A0A096LP01 95 aa9.03□□□□□ -0.96
CHAF1A-205ENST00000587580 SPRR2DP22532 72 aa9.01□□□□□ -0.97
CHAF1A-205ENST00000587580 A8MU10 97 aa8.97□□□□□ -0.97
CHAF1A-205ENST00000587580 PRR15LQ9BU68 103 aa8.96□□□□□ -0.98
CHAF1A-205ENST00000587580 TMEM258P61165 79 aa8.95□□□□□ -0.98
CHAF1A-205ENST00000587580 LINC01558Q9Y6Z2 57 aa8.89□□□□□ -0.99
CHAF1A-205ENST00000587580 KRTAP2-2Q9BYT5 123 aa8.82□□□□□ -1
CHAF1A-205ENST00000587580 KRTAP2-1Q9BYU5 128 aa8.82□□□□□ -1
CHAF1A-205ENST00000587580 KRTAP19-7Q3SYF9 63 aa8.81□□□□□ -1
CHAF1A-205ENST00000587580 MT1EP04732 61 aa8.75□□□□□ -1.01
CHAF1A-205ENST00000587580 LCE3BQ5TA77 95 aa8.74□□□□□ -1.01
CHAF1A-205ENST00000587580 C10orf95Q9H7T3 257 aa8.67□□□□□ -1.02
CHAF1A-205ENST00000587580 UQCR11O14957 56 aa8.65□□□□□ -1.02
CHAF1A-205ENST00000587580 KRTAP19-5Q3LI72 72 aa8.65□□□□□ -1.02
CHAF1A-205ENST00000587580 KRTAP19-3Q7Z4W3 81 aa8.64□□□□□ -1.03
CHAF1A-205ENST00000587580 LCE5AQ5TCM9 118 aa8.63□□□□□ -1.03
CHAF1A-205ENST00000587580 TNP1P09430 55 aa8.62□□□□□ -1.03
CHAF1A-205ENST00000587580 LCE3AQ5TA76 89 aa8.53□□□□□ -1.04
CHAF1A-205ENST00000587580 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
CHAF1A-205ENST00000587580 MT1GP13640 62 aa8.44□□□□□ -1.06
CHAF1A-205ENST00000587580 V9GYY9 64 aa8.44□□□□□ -1.06
CHAF1A-205ENST00000587580 PSPHP1O15172 72 aa8.4□□□□□ -1.06
CHAF1A-205ENST00000587580 PP632Q6XCG6 107 aa8.38□□□□□ -1.07
CHAF1A-205ENST00000587580 MT1LQ93083 61 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms