RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 COL7A1Q02388 2944 aa0.78□□□□□ -2.28
NEDD4L-217ENST00000587246 LRBAP50851 2863 aa0.78□□□□□ -2.28
NEDD4L-217ENST00000587246 DEFB1P60022 68 aa0.78□□□□□ -2.28
NEDD4L-217ENST00000587246 LAMA2P24043 3122 aaKnown RBP0.78□□□□□ -2.28
NEDD4L-217ENST00000587246 STAB1Q9NY15 2570 aa0.78□□□□□ -2.28
NEDD4L-217ENST00000587246 UTP20O75691 2785 aaKnown RBP0.78□□□□□ -2.29
NEDD4L-217ENST00000587246 DNAH6Q9C0G6 4158 aa0.78□□□□□ -2.29
NEDD4L-217ENST00000587246 HTTP42858 3142 aa0.78□□□□□ -2.29
NEDD4L-217ENST00000587246 FAT3Q8TDW7 4589 aa0.77□□□□□ -2.29
NEDD4L-217ENST00000587246 MKI67P46013 3256 aaKnown RBP0.77□□□□□ -2.29
NEDD4L-217ENST00000587246 DNAH10Q8IVF4 4471 aa0.77□□□□□ -2.29
NEDD4L-217ENST00000587246 H3BUX3 64 aa0.77□□□□□ -2.29
NEDD4L-217ENST00000587246 ANKHD1Q8IWZ3 2542 aaKnown RBP0.77□□□□□ -2.29
NEDD4L-217ENST00000587246 TRIOO75962 3097 aa0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 NBEAQ8NFP9 2946 aa0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 HIVEP1P15822 2718 aa0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 NSD1Q96L73 2696 aaPredicted RBP0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 SPG11Q96JI7 2443 aa0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 A0A096LNI7 61 aa0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 CSMD1Q96PZ7 3565 aa0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 APOBP04114 4563 aaKnown RBP0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 DNAH9Q9NYC9 4486 aa0.76□□□□□ -2.29
NEDD4L-217ENST00000587246 FLGP20930 4061 aaPredicted RBP0.75□□□□□ -2.29
NEDD4L-217ENST00000587246 DNAH1Q9P2D7 4330 aa0.75□□□□□ -2.29
NEDD4L-217ENST00000587246 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
NEDD4L-217ENST00000587246 WDFY4Q6ZS81 3184 aa0.75□□□□□ -2.29
NEDD4L-217ENST00000587246 ZANQ9Y493 2812 aa0.74□□□□□ -2.29
NEDD4L-217ENST00000587246 DNAH12Q6ZR08 3092 aa0.74□□□□□ -2.29
NEDD4L-217ENST00000587246 MUC3AQ02505 3323 aa0.74□□□□□ -2.29
NEDD4L-217ENST00000587246 HTN1P15515 57 aa0.74□□□□□ -2.29
NEDD4L-217ENST00000587246 DEFB136Q30KP8 78 aa0.74□□□□□ -2.29
NEDD4L-217ENST00000587246 RHPN1-AS1Q9BWJ2 59 aa0.74□□□□□ -2.29
NEDD4L-217ENST00000587246 MYO18BQ8IUG5 2567 aa0.74□□□□□ -2.29
NEDD4L-217ENST00000587246 LRP1Q07954 4544 aaKnown RBP0.74□□□□□ -2.29
NEDD4L-217ENST00000587246 ACACBO00763 2458 aa0.73□□□□□ -2.29
NEDD4L-217ENST00000587246 XIRP2A4UGR9 3374 aa0.73□□□□□ -2.29
NEDD4L-217ENST00000587246 DMDP11532 3685 aa0.73□□□□□ -2.29
NEDD4L-217ENST00000587246 WDR87Q6ZQQ6 2873 aa0.73□□□□□ -2.29
NEDD4L-217ENST00000587246 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
NEDD4L-217ENST00000587246 DCHS1Q96JQ0 3298 aa0.72□□□□□ -2.29
NEDD4L-217ENST00000587246 CFAP47Q6ZTR5 3102 aa0.72□□□□□ -2.29
NEDD4L-217ENST00000587246 ADGRG4Q8IZF6 3080 aa0.72□□□□□ -2.29
NEDD4L-217ENST00000587246 ITPR1Q14643 2758 aa0.72□□□□□ -2.29
NEDD4L-217ENST00000587246 MYO9AB2RTY4 2548 aa0.72□□□□□ -2.29
NEDD4L-217ENST00000587246 HRNRQ86YZ3 2850 aaPredicted RBP0.71□□□□□ -2.3
NEDD4L-217ENST00000587246 GPR98Q8WXG9 6306 aa0.71□□□□□ -2.3
NEDD4L-217ENST00000587246 EYSQ5T1H1 3165 aa0.71□□□□□ -2.3
NEDD4L-217ENST00000587246 FLNAP21333 2647 aaKnown RBP0.71□□□□□ -2.3
NEDD4L-217ENST00000587246 FAT1Q14517 4588 aa0.71□□□□□ -2.3
NEDD4L-217ENST00000587246 BOD1L1Q8NFC6 3051 aa0.7□□□□□ -2.3
NEDD4L-217ENST00000587246 TLN2Q9Y4G6 2542 aa0.7□□□□□ -2.3
NEDD4L-217ENST00000587246 LAMA3Q16787 3333 aa0.7□□□□□ -2.3
NEDD4L-217ENST00000587246 PLECQ15149 4684 aaKnown RBP0.7□□□□□ -2.3
NEDD4L-217ENST00000587246 STATHP02808 62 aa0.7□□□□□ -2.3
NEDD4L-217ENST00000587246 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
NEDD4L-217ENST00000587246 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
NEDD4L-217ENST00000587246 FREM2Q5SZK8 3169 aa0.7□□□□□ -2.3
NEDD4L-217ENST00000587246 CEP295Q9C0D2 2601 aa0.69□□□□□ -2.3
NEDD4L-217ENST00000587246 UNC80Q8N2C7 3258 aa0.69□□□□□ -2.3
NEDD4L-217ENST00000587246 KRTAP8-1Q8IUC2 63 aa0.69□□□□□ -2.3
NEDD4L-217ENST00000587246 SONP18583 2426 aaKnown RBP0.69□□□□□ -2.3
NEDD4L-217ENST00000587246 SVEP1Q4LDE5 3571 aa0.69□□□□□ -2.3
NEDD4L-217ENST00000587246 TRRAPQ9Y4A5 3859 aa0.69□□□□□ -2.3
NEDD4L-217ENST00000587246 UBR4Q5T4S7 5183 aa0.68□□□□□ -2.3
NEDD4L-217ENST00000587246 LPAP08519 4548 aa0.68□□□□□ -2.3
NEDD4L-217ENST00000587246 ASPMQ8IZT6 3477 aa0.68□□□□□ -2.3
NEDD4L-217ENST00000587246 UTRNP46939 3433 aa0.68□□□□□ -2.3
NEDD4L-217ENST00000587246 CFAP46Q8IYW2 2715 aa0.68□□□□□ -2.3
NEDD4L-217ENST00000587246 IGSF10Q6WRI0 2623 aa0.68□□□□□ -2.3
NEDD4L-217ENST00000587246 CSMD2Q7Z408 3487 aa0.68□□□□□ -2.3
NEDD4L-217ENST00000587246 SPEGQ15772 3267 aa0.67□□□□□ -2.3
NEDD4L-217ENST00000587246 CENPFP49454 3210 aa0.67□□□□□ -2.3
NEDD4L-217ENST00000587246 CMYA5Q8N3K9 4069 aa0.67□□□□□ -2.3
NEDD4L-217ENST00000587246 NBEAL1Q6ZS30 2694 aa0.67□□□□□ -2.3
NEDD4L-217ENST00000587246 NIPBLQ6KC79 2804 aaeCLIP0.66□□□□□ -2.3
NEDD4L-217ENST00000587246 SPRR2DP22532 72 aa0.66□□□□□ -2.3
NEDD4L-217ENST00000587246 DEFB124Q8NES8 71 aa0.66□□□□□ -2.3
NEDD4L-217ENST00000587246 PKHD1P08F94 4074 aa0.66□□□□□ -2.3
NEDD4L-217ENST00000587246 MACF1Q9UPN3 7388 aaKnown RBP0.65□□□□□ -2.3
NEDD4L-217ENST00000587246 LRP1BQ9NZR2 4599 aa0.65□□□□□ -2.31
NEDD4L-217ENST00000587246 USP34Q70CQ2 3546 aa0.65□□□□□ -2.31
NEDD4L-217ENST00000587246 DNAH17Q9UFH2 4485 aa0.65□□□□□ -2.31
NEDD4L-217ENST00000587246 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
NEDD4L-217ENST00000587246 TEX15Q9BXT5 2789 aa0.64□□□□□ -2.31
NEDD4L-217ENST00000587246 EP400Q96L91 3159 aa0.64□□□□□ -2.31
NEDD4L-217ENST00000587246 DNAH5Q8TE73 4624 aa0.64□□□□□ -2.31
NEDD4L-217ENST00000587246 BRCA2P51587 3418 aa0.64□□□□□ -2.31
NEDD4L-217ENST00000587246 SPTAN1Q13813 2472 aaKnown RBP0.63□□□□□ -2.31
NEDD4L-217ENST00000587246 LAMA1P25391 3075 aa0.63□□□□□ -2.31
NEDD4L-217ENST00000587246 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
NEDD4L-217ENST00000587246 TGP01266 2768 aa0.63□□□□□ -2.31
NEDD4L-217ENST00000587246 LOC400499M0QZD8 3231 aa0.62□□□□□ -2.31
NEDD4L-217ENST00000587246 RYR1P21817 5038 aa0.62□□□□□ -2.31
NEDD4L-217ENST00000587246 DYNC1H1Q14204 4646 aaKnown RBP0.62□□□□□ -2.31
NEDD4L-217ENST00000587246 SPRR2BP35325 72 aa0.62□□□□□ -2.31
NEDD4L-217ENST00000587246 KIAA1109Q2LD37 5005 aa0.62□□□□□ -2.31
NEDD4L-217ENST00000587246 GOLGB1Q14789 3259 aaKnown RBP0.62□□□□□ -2.31
NEDD4L-217ENST00000587246 SMR3BP02814 79 aaPredicted RBP0.61□□□□□ -2.31
NEDD4L-217ENST00000587246 ITPR2Q14571 2701 aa0.61□□□□□ -2.31
NEDD4L-217ENST00000587246 MUC2Q02817 5179 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms