RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 MDN1Q9NU22 5596 aa8.5□□□□□ -1.05
TRAF4-216ENST00000586813 KMT2DO14686 5537 aa8.5□□□□□ -1.05
TRAF4-216ENST00000586813 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
TRAF4-216ENST00000586813 TP53AIP1Q9HCN2 124 aa8.48□□□□□ -1.05
TRAF4-216ENST00000586813 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
TRAF4-216ENST00000586813 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
TRAF4-216ENST00000586813 IMUPQ9GZP8 106 aa8.43□□□□□ -1.06
TRAF4-216ENST00000586813 CRIPTQ9P021 101 aa8.43□□□□□ -1.06
TRAF4-216ENST00000586813 A0A087WVE0 104 aa8.38□□□□□ -1.07
TRAF4-216ENST00000586813 CYP4F30PQ9H0H9 118 aa8.38□□□□□ -1.07
TRAF4-216ENST00000586813 J3QR89 54 aa8.36□□□□□ -1.07
TRAF4-216ENST00000586813 LINC00643Q86TS7 51 aa8.36□□□□□ -1.07
TRAF4-216ENST00000586813 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
TRAF4-216ENST00000586813 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
TRAF4-216ENST00000586813 H0YAA0 97 aa8.25□□□□□ -1.09
TRAF4-216ENST00000586813 UQCRQO14949 82 aa8.24□□□□□ -1.09
TRAF4-216ENST00000586813 KRTAP2-3P0C7H8 128 aa8.24□□□□□ -1.09
TRAF4-216ENST00000586813 KRTAP2-4Q9BYR9 128 aa8.24□□□□□ -1.09
TRAF4-216ENST00000586813 NDUFC1O43677 76 aa8.22□□□□□ -1.09
TRAF4-216ENST00000586813 ATOX1O00244 68 aa8.21□□□□□ -1.1
TRAF4-216ENST00000586813 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.1
TRAF4-216ENST00000586813 H0Y9P7 68 aa8.2□□□□□ -1.1
TRAF4-216ENST00000586813 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
TRAF4-216ENST00000586813 SPRR2EP22531 72 aa8.17□□□□□ -1.1
TRAF4-216ENST00000586813 SPRR2BP35325 72 aa8.17□□□□□ -1.1
TRAF4-216ENST00000586813 SPRR2AP35326 72 aa8.17□□□□□ -1.1
TRAF4-216ENST00000586813 A8MUN3 132 aa8.16□□□□□ -1.1
TRAF4-216ENST00000586813 MT1XP80297 61 aa8.15□□□□□ -1.1
TRAF4-216ENST00000586813 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
TRAF4-216ENST00000586813 MP68P56378 58 aa8.12□□□□□ -1.11
TRAF4-216ENST00000586813 SCGB1A1P11684 91 aa8.11□□□□□ -1.11
TRAF4-216ENST00000586813 K7ERU9 68 aa8.09□□□□□ -1.11
TRAF4-216ENST00000586813 LINC00208Q96KT6 92 aa8.08□□□□□ -1.12
TRAF4-216ENST00000586813 KRTAP8-1Q8IUC2 63 aa8.07□□□□□ -1.12
TRAF4-216ENST00000586813 OCR1Q9BZK8 76 aa8.06□□□□□ -1.12
TRAF4-216ENST00000586813 PLAC4Q8WY50 150 aa8.05□□□□□ -1.12
TRAF4-216ENST00000586813 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
TRAF4-216ENST00000586813 LCE1AQ5T7P2 110 aa8.01□□□□□ -1.13
TRAF4-216ENST00000586813 H3BPC8 53 aa7.97□□□□□ -1.13
TRAF4-216ENST00000586813 R4GN34 69 aa7.97□□□□□ -1.13
TRAF4-216ENST00000586813 MT-ATP8P03928 68 aa7.96□□□□□ -1.14
TRAF4-216ENST00000586813 KRTAP2-2Q9BYT5 123 aa7.96□□□□□ -1.14
TRAF4-216ENST00000586813 KRTAP2-1Q9BYU5 128 aa7.96□□□□□ -1.14
TRAF4-216ENST00000586813 P0C880 135 aa7.92□□□□□ -1.14
TRAF4-216ENST00000586813 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
TRAF4-216ENST00000586813 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
TRAF4-216ENST00000586813 M0QZ58 72 aa7.89□□□□□ -1.15
TRAF4-216ENST00000586813 SPRR2DP22532 72 aa7.89□□□□□ -1.15
TRAF4-216ENST00000586813 SMIM20Q8N5G0 67 aa7.89□□□□□ -1.15
TRAF4-216ENST00000586813 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
TRAF4-216ENST00000586813 TRAV7A0A075B6U4 112 aa7.83□□□□□ -1.16
TRAF4-216ENST00000586813 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
TRAF4-216ENST00000586813 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
TRAF4-216ENST00000586813 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
TRAF4-216ENST00000586813 DMAC1Q96GE9 116 aa7.75□□□□□ -1.17
TRAF4-216ENST00000586813 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
TRAF4-216ENST00000586813 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
TRAF4-216ENST00000586813 ACYP2P14621 99 aa7.67□□□□□ -1.18
TRAF4-216ENST00000586813 SNURFQ9Y675 71 aa7.66□□□□□ -1.18
TRAF4-216ENST00000586813 SERP2Q8N6R1 65 aa7.64□□□□□ -1.19
TRAF4-216ENST00000586813 SPTSSBQ8NFR3 76 aa7.6□□□□□ -1.19
TRAF4-216ENST00000586813 CHKB-CPT1BH3BT56 60 aa7.59□□□□□ -1.19
TRAF4-216ENST00000586813 SPANXA2-OT1Q8N9U9 137 aa7.52□□□□□ -1.21
TRAF4-216ENST00000586813 COX7CP15954 63 aa7.45□□□□□ -1.22
TRAF4-216ENST00000586813 GPR98Q8WXG9 6306 aa7.44□□□□□ -1.22
TRAF4-216ENST00000586813 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
TRAF4-216ENST00000586813 ANAPC13Q9BS18 74 aa7.33□□□□□ -1.24
TRAF4-216ENST00000586813 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
TRAF4-216ENST00000586813 COA5Q86WW8 74 aa7.31□□□□□ -1.24
TRAF4-216ENST00000586813 KRTAP19-7Q3SYF9 63 aa7.29□□□□□ -1.24
TRAF4-216ENST00000586813 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
TRAF4-216ENST00000586813 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
TRAF4-216ENST00000586813 H7BZZ5 65 aa7.26□□□□□ -1.25
TRAF4-216ENST00000586813 KRTAP19-3Q7Z4W3 81 aa7.25□□□□□ -1.25
TRAF4-216ENST00000586813 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
TRAF4-216ENST00000586813 MT1EP04732 61 aa7.24□□□□□ -1.25
TRAF4-216ENST00000586813 SEC61GP60059 68 aa7.23□□□□□ -1.25
TRAF4-216ENST00000586813 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
TRAF4-216ENST00000586813 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
TRAF4-216ENST00000586813 CCDC179H3BU77 68 aa7.11□□□□□ -1.27
TRAF4-216ENST00000586813 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
TRAF4-216ENST00000586813 ATP5EP56381 51 aaPredicted RBP7.05□□□□□ -1.28
TRAF4-216ENST00000586813 A0A0D9SG42 100 aa7.03□□□□□ -1.28
TRAF4-216ENST00000586813 MT1GP13640 62 aa7.02□□□□□ -1.29
TRAF4-216ENST00000586813 KRTAP19-5Q3LI72 72 aa7.01□□□□□ -1.29
TRAF4-216ENST00000586813 A0A1B0GU33 70 aa6.99□□□□□ -1.29
TRAF4-216ENST00000586813 A0A1B0GU69 56 aa6.99□□□□□ -1.29
TRAF4-216ENST00000586813 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
TRAF4-216ENST00000586813 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
TRAF4-216ENST00000586813 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
TRAF4-216ENST00000586813 MT4P47944 62 aa6.93□□□□□ -1.3
TRAF4-216ENST00000586813 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
TRAF4-216ENST00000586813 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
TRAF4-216ENST00000586813 MT1MQ8N339 61 aa6.91□□□□□ -1.3
TRAF4-216ENST00000586813 TMEM258P61165 79 aa6.9□□□□□ -1.3
TRAF4-216ENST00000586813 PRR15LQ9BU68 103 aa6.87□□□□□ -1.31
TRAF4-216ENST00000586813 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
TRAF4-216ENST00000586813 MT1LQ93083 61 aa6.86□□□□□ -1.31
TRAF4-216ENST00000586813 AHNAK2Q8IVF2 5795 aa6.86□□□□□ -1.31
TRAF4-216ENST00000586813 SMIM26A0A096LP01 95 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms