RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 LRP2P98164 4655 aa8.28□□□□□ -1.08
TVP23C-210ENST00000584811 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
TVP23C-210ENST00000584811 XP32Q5T750 250 aa8.23□□□□□ -1.09
TVP23C-210ENST00000584811 MIR22HGQ0VDD5 57 aa8.19□□□□□ -1.1
TVP23C-210ENST00000584811 UQCR11O14957 56 aa8.19□□□□□ -1.1
TVP23C-210ENST00000584811 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
TVP23C-210ENST00000584811 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
TVP23C-210ENST00000584811 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
TVP23C-210ENST00000584811 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
TVP23C-210ENST00000584811 H3BS24 57 aa8.13□□□□□ -1.11
TVP23C-210ENST00000584811 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
TVP23C-210ENST00000584811 H0YAA0 97 aa8.08□□□□□ -1.12
TVP23C-210ENST00000584811 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
TVP23C-210ENST00000584811 A0A1B0GU33 70 aa8.01□□□□□ -1.13
TVP23C-210ENST00000584811 CSAG1Q6PB30 78 aa8.01□□□□□ -1.13
TVP23C-210ENST00000584811 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
TVP23C-210ENST00000584811 HERC2O95714 4834 aa7.97□□□□□ -1.13
TVP23C-210ENST00000584811 S4R3F8 94 aa7.92□□□□□ -1.14
TVP23C-210ENST00000584811 KRTAP10-6P60371 365 aaPredicted RBP7.91□□□□□ -1.14
TVP23C-210ENST00000584811 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
TVP23C-210ENST00000584811 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
TVP23C-210ENST00000584811 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
TVP23C-210ENST00000584811 MUC2Q02817 5179 aa7.87□□□□□ -1.15
TVP23C-210ENST00000584811 P0C880 135 aa7.85□□□□□ -1.15
TVP23C-210ENST00000584811 A0A0D9SG42 100 aa7.8□□□□□ -1.16
TVP23C-210ENST00000584811 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
TVP23C-210ENST00000584811 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
TVP23C-210ENST00000584811 KRTAP4-1Q9BYQ7 146 aa7.73□□□□□ -1.17
TVP23C-210ENST00000584811 HERC1Q15751 4861 aa7.73□□□□□ -1.17
TVP23C-210ENST00000584811 J3QL48 77 aa7.72□□□□□ -1.17
TVP23C-210ENST00000584811 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
TVP23C-210ENST00000584811 PCLOQ9Y6V0 5065 aa7.66□□□□□ -1.18
TVP23C-210ENST00000584811 ROMO1P60602 79 aa7.59□□□□□ -1.19
TVP23C-210ENST00000584811 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.2
TVP23C-210ENST00000584811 KRTAP12-2P59991 146 aa7.57□□□□□ -1.2
TVP23C-210ENST00000584811 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
TVP23C-210ENST00000584811 K7ERS5 55 aa7.57□□□□□ -1.2
TVP23C-210ENST00000584811 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
TVP23C-210ENST00000584811 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
TVP23C-210ENST00000584811 KRTAP19-2Q3LHN2 52 aa7.48□□□□□ -1.21
TVP23C-210ENST00000584811 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
TVP23C-210ENST00000584811 FAT4Q6V0I7 4981 aa7.47□□□□□ -1.21
TVP23C-210ENST00000584811 HMCN2Q8NDA2 5059 aa7.47□□□□□ -1.21
TVP23C-210ENST00000584811 M0QZ58 72 aa7.42□□□□□ -1.22
TVP23C-210ENST00000584811 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.23
TVP23C-210ENST00000584811 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
TVP23C-210ENST00000584811 R4GN34 69 aa7.36□□□□□ -1.23
TVP23C-210ENST00000584811 FLGP20930 4061 aaPredicted RBP7.35□□□□□ -1.23
TVP23C-210ENST00000584811 UBR4Q5T4S7 5183 aa7.32□□□□□ -1.24
TVP23C-210ENST00000584811 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
TVP23C-210ENST00000584811 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
TVP23C-210ENST00000584811 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
TVP23C-210ENST00000584811 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
TVP23C-210ENST00000584811 M0R2T5 61 aa6.95□□□□□ -1.3
TVP23C-210ENST00000584811 MT1HP80294 61 aa6.93□□□□□ -1.3
TVP23C-210ENST00000584811 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.32
TVP23C-210ENST00000584811 MT1FP04733 61 aa6.8□□□□□ -1.32
TVP23C-210ENST00000584811 A0A0A0MQY5 61 aa6.78□□□□□ -1.32
TVP23C-210ENST00000584811 MT2AP02795 61 aa6.77□□□□□ -1.33
TVP23C-210ENST00000584811 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
TVP23C-210ENST00000584811 SPRR2GQ9BYE4 73 aa6.75□□□□□ -1.33
TVP23C-210ENST00000584811 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
TVP23C-210ENST00000584811 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
TVP23C-210ENST00000584811 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
TVP23C-210ENST00000584811 TNP1P09430 55 aa6.62□□□□□ -1.35
TVP23C-210ENST00000584811 USH2AO75445 5202 aa6.54□□□□□ -1.36
TVP23C-210ENST00000584811 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
TVP23C-210ENST00000584811 MT1BP07438 61 aa6.5□□□□□ -1.37
TVP23C-210ENST00000584811 KRTAP19-8Q3LI54 63 aa6.46□□□□□ -1.37
TVP23C-210ENST00000584811 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
TVP23C-210ENST00000584811 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
TVP23C-210ENST00000584811 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
TVP23C-210ENST00000584811 MT1XP80297 61 aa6.41□□□□□ -1.38
TVP23C-210ENST00000584811 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
TVP23C-210ENST00000584811 KMT2DO14686 5537 aa6.31□□□□□ -1.4
TVP23C-210ENST00000584811 LCE2BO14633 110 aa6.3□□□□□ -1.4
TVP23C-210ENST00000584811 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
TVP23C-210ENST00000584811 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
TVP23C-210ENST00000584811 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
TVP23C-210ENST00000584811 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
TVP23C-210ENST00000584811 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
TVP23C-210ENST00000584811 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
TVP23C-210ENST00000584811 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
TVP23C-210ENST00000584811 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
TVP23C-210ENST00000584811 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
TVP23C-210ENST00000584811 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
TVP23C-210ENST00000584811 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
TVP23C-210ENST00000584811 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
TVP23C-210ENST00000584811 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
TVP23C-210ENST00000584811 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
TVP23C-210ENST00000584811 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
TVP23C-210ENST00000584811 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
TVP23C-210ENST00000584811 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
TVP23C-210ENST00000584811 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
TVP23C-210ENST00000584811 KRTAP19-6Q3LI70 58 aa5.58□□□□□ -1.52
TVP23C-210ENST00000584811 MT1EP04732 61 aa5.54□□□□□ -1.52
TVP23C-210ENST00000584811 MT1LQ93083 61 aa5.51□□□□□ -1.53
TVP23C-210ENST00000584811 INE1O15225 51 aa5.46□□□□□ -1.53
TVP23C-210ENST00000584811 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
TVP23C-210ENST00000584811 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms