RNA–Protein interactions for RNA: ENST00000584701.1

RBP3-201, Transcript of retinol binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBP3, Length 4,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBP3-201ENST00000584701 DNAH2Q9P225 4427 aa6.79□□□□□ -1.32
RBP3-201ENST00000584701 TNP1P09430 55 aa6.79□□□□□ -1.32
RBP3-201ENST00000584701 DNAH5Q8TE73 4624 aa6.77□□□□□ -1.33
RBP3-201ENST00000584701 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
RBP3-201ENST00000584701 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
RBP3-201ENST00000584701 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
RBP3-201ENST00000584701 HECTD4Q9Y4D8 3996 aa6.72□□□□□ -1.33
RBP3-201ENST00000584701 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
RBP3-201ENST00000584701 FAT1Q14517 4588 aa6.69□□□□□ -1.34
RBP3-201ENST00000584701 DYNC2H1Q8NCM8 4307 aaKnown RBP6.68□□□□□ -1.34
RBP3-201ENST00000584701 VPS13BQ7Z7G8 4022 aa6.64□□□□□ -1.35
RBP3-201ENST00000584701 MT1HL1P0DM35 61 aa6.63□□□□□ -1.35
RBP3-201ENST00000584701 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
RBP3-201ENST00000584701 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
RBP3-201ENST00000584701 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
RBP3-201ENST00000584701 ALMS1Q8TCU4 4167 aa6.58□□□□□ -1.36
RBP3-201ENST00000584701 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
RBP3-201ENST00000584701 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
RBP3-201ENST00000584701 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
RBP3-201ENST00000584701 HYDINQ4G0P3 5121 aa6.53□□□□□ -1.36
RBP3-201ENST00000584701 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
RBP3-201ENST00000584701 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
RBP3-201ENST00000584701 PRO2289Q9P1D8 64 aa6.46□□□□□ -1.38
RBP3-201ENST00000584701 PKHD1P08F94 4074 aa6.45□□□□□ -1.38
RBP3-201ENST00000584701 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
RBP3-201ENST00000584701 SACSQ9NZJ4 4579 aa6.42□□□□□ -1.38
RBP3-201ENST00000584701 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
RBP3-201ENST00000584701 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
RBP3-201ENST00000584701 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
RBP3-201ENST00000584701 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
RBP3-201ENST00000584701 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
RBP3-201ENST00000584701 PKD1P98161 4303 aa6.3□□□□□ -1.4
RBP3-201ENST00000584701 KIAA1109Q2LD37 5005 aa6.28□□□□□ -1.4
RBP3-201ENST00000584701 RYR1P21817 5038 aa6.23□□□□□ -1.41
RBP3-201ENST00000584701 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
RBP3-201ENST00000584701 RYR3Q15413 4870 aa6.16□□□□□ -1.42
RBP3-201ENST00000584701 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.42
RBP3-201ENST00000584701 RYR2Q92736 4967 aa6.14□□□□□ -1.43
RBP3-201ENST00000584701 KMT2CQ8NEZ4 4911 aaKnown RBP6.13□□□□□ -1.43
RBP3-201ENST00000584701 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
RBP3-201ENST00000584701 LRP2P98164 4655 aa6.05□□□□□ -1.44
RBP3-201ENST00000584701 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
RBP3-201ENST00000584701 HSPG2P98160 4391 aa5.99□□□□□ -1.45
RBP3-201ENST00000584701 PKHD1L1Q86WI1 4243 aa5.93□□□□□ -1.46
RBP3-201ENST00000584701 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
RBP3-201ENST00000584701 TNXBP22105 4242 aa5.85□□□□□ -1.47
RBP3-201ENST00000584701 LPAP08519 4548 aa5.84□□□□□ -1.47
RBP3-201ENST00000584701 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
RBP3-201ENST00000584701 HERC2O95714 4834 aa5.74□□□□□ -1.49
RBP3-201ENST00000584701 EPPK1P58107 5090 aaKnown RBP5.72□□□□□ -1.49
RBP3-201ENST00000584701 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
RBP3-201ENST00000584701 MT1HP80294 61 aa5.67□□□□□ -1.5
RBP3-201ENST00000584701 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
RBP3-201ENST00000584701 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
RBP3-201ENST00000584701 MT2AP02795 61 aa5.6□□□□□ -1.51
RBP3-201ENST00000584701 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
RBP3-201ENST00000584701 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
RBP3-201ENST00000584701 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
RBP3-201ENST00000584701 MT1FP04733 61 aa5.5□□□□□ -1.53
RBP3-201ENST00000584701 SPRR2GQ9BYE4 73 aa5.49□□□□□ -1.53
RBP3-201ENST00000584701 MUC2Q02817 5179 aa5.48□□□□□ -1.53
RBP3-201ENST00000584701 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.53
RBP3-201ENST00000584701 BIRC6Q9NR09 4857 aa5.44□□□□□ -1.54
RBP3-201ENST00000584701 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
RBP3-201ENST00000584701 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
RBP3-201ENST00000584701 INE1O15225 51 aa5.37□□□□□ -1.55
RBP3-201ENST00000584701 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
RBP3-201ENST00000584701 LCE2CQ5TA81 110 aa5.34□□□□□ -1.56
RBP3-201ENST00000584701 HERC1Q15751 4861 aa5.33□□□□□ -1.56
RBP3-201ENST00000584701 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
RBP3-201ENST00000584701 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
RBP3-201ENST00000584701 FAT4Q6V0I7 4981 aa5.29□□□□□ -1.56
RBP3-201ENST00000584701 RNF213Q63HN8 5207 aa5.28□□□□□ -1.56
RBP3-201ENST00000584701 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
RBP3-201ENST00000584701 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
RBP3-201ENST00000584701 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
RBP3-201ENST00000584701 MT1BP07438 61 aa5.11□□□□□ -1.59
RBP3-201ENST00000584701 MT1XP80297 61 aa5.11□□□□□ -1.59
RBP3-201ENST00000584701 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
RBP3-201ENST00000584701 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
RBP3-201ENST00000584701 KRTAP10-5P60370 271 aa5.09□□□□□ -1.59
RBP3-201ENST00000584701 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
RBP3-201ENST00000584701 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
RBP3-201ENST00000584701 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
RBP3-201ENST00000584701 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
RBP3-201ENST00000584701 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
RBP3-201ENST00000584701 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
RBP3-201ENST00000584701 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
RBP3-201ENST00000584701 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
RBP3-201ENST00000584701 LCE2BO14633 110 aa4.82□□□□□ -1.64
RBP3-201ENST00000584701 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
RBP3-201ENST00000584701 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
RBP3-201ENST00000584701 SPRR2EP22531 72 aa4.75□□□□□ -1.65
RBP3-201ENST00000584701 SPRR2BP35325 72 aa4.75□□□□□ -1.65
RBP3-201ENST00000584701 SPRR2AP35326 72 aa4.75□□□□□ -1.65
RBP3-201ENST00000584701 USH2AO75445 5202 aa4.67□□□□□ -1.66
RBP3-201ENST00000584701 MT1GP13640 62 aa4.65□□□□□ -1.67
RBP3-201ENST00000584701 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
RBP3-201ENST00000584701 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
RBP3-201ENST00000584701 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms