RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 MYCBP2O75592 4640 aa5.4□□□□□ -1.54
RNF43-207ENST00000583753 XP32Q5T750 250 aa5.4□□□□□ -1.55
RNF43-207ENST00000583753 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
RNF43-207ENST00000583753 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
RNF43-207ENST00000583753 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
RNF43-207ENST00000583753 DYNC2H1Q8NCM8 4307 aaKnown RBP5.33□□□□□ -1.56
RNF43-207ENST00000583753 HYDINQ4G0P3 5121 aa5.33□□□□□ -1.56
RNF43-207ENST00000583753 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
RNF43-207ENST00000583753 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
RNF43-207ENST00000583753 KRTAP3-3Q9BYR6 98 aa5.29□□□□□ -1.56
RNF43-207ENST00000583753 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
RNF43-207ENST00000583753 J3QL48 77 aa5.26□□□□□ -1.57
RNF43-207ENST00000583753 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
RNF43-207ENST00000583753 A0A1B0GVY2 172 aa5.25□□□□□ -1.57
RNF43-207ENST00000583753 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
RNF43-207ENST00000583753 LRP1Q07954 4544 aaKnown RBP5.23□□□□□ -1.57
RNF43-207ENST00000583753 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
RNF43-207ENST00000583753 FAT2Q9NYQ8 4349 aa5.21□□□□□ -1.57
RNF43-207ENST00000583753 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
RNF43-207ENST00000583753 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
RNF43-207ENST00000583753 APOBP04114 4563 aaKnown RBP5.17□□□□□ -1.58
RNF43-207ENST00000583753 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
RNF43-207ENST00000583753 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
RNF43-207ENST00000583753 PLAC4Q8WY50 150 aa5.11□□□□□ -1.59
RNF43-207ENST00000583753 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
RNF43-207ENST00000583753 PKD1P98161 4303 aa5.09□□□□□ -1.59
RNF43-207ENST00000583753 RYR1P21817 5038 aa5.02□□□□□ -1.61
RNF43-207ENST00000583753 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
RNF43-207ENST00000583753 HSPG2P98160 4391 aa5.01□□□□□ -1.61
RNF43-207ENST00000583753 M0R2T5 61 aa5□□□□□ -1.61
RNF43-207ENST00000583753 LRP2P98164 4655 aa5□□□□□ -1.61
RNF43-207ENST00000583753 MT1HL1P0DM35 61 aa5□□□□□ -1.61
RNF43-207ENST00000583753 LORP23490 312 aaPredicted RBP4.99□□□□□ -1.61
RNF43-207ENST00000583753 KMT2CQ8NEZ4 4911 aaKnown RBP4.94□□□□□ -1.62
RNF43-207ENST00000583753 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.62
RNF43-207ENST00000583753 RYR3Q15413 4870 aa4.9□□□□□ -1.62
RNF43-207ENST00000583753 KRTAP17-1Q9BYP8 105 aa4.9□□□□□ -1.63
RNF43-207ENST00000583753 TNP1P09430 55 aa4.89□□□□□ -1.63
RNF43-207ENST00000583753 LPAP08519 4548 aa4.85□□□□□ -1.63
RNF43-207ENST00000583753 PKHD1L1Q86WI1 4243 aa4.84□□□□□ -1.63
RNF43-207ENST00000583753 RYR2Q92736 4967 aa4.82□□□□□ -1.64
RNF43-207ENST00000583753 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
RNF43-207ENST00000583753 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
RNF43-207ENST00000583753 TNXBP22105 4242 aa4.74□□□□□ -1.65
RNF43-207ENST00000583753 BIRC6Q9NR09 4857 aa4.71□□□□□ -1.66
RNF43-207ENST00000583753 EPPK1P58107 5090 aaKnown RBP4.65□□□□□ -1.66
RNF43-207ENST00000583753 ABCA13Q86UQ4 5058 aa4.64□□□□□ -1.67
RNF43-207ENST00000583753 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
RNF43-207ENST00000583753 MUC2Q02817 5179 aa4.63□□□□□ -1.67
RNF43-207ENST00000583753 HERC2O95714 4834 aa4.53□□□□□ -1.68
RNF43-207ENST00000583753 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
RNF43-207ENST00000583753 FAT4Q6V0I7 4981 aa4.42□□□□□ -1.7
RNF43-207ENST00000583753 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
RNF43-207ENST00000583753 RNF213Q63HN8 5207 aa4.34□□□□□ -1.71
RNF43-207ENST00000583753 HERC1Q15751 4861 aa4.31□□□□□ -1.72
RNF43-207ENST00000583753 MUC17Q685J3 4493 aa4.31□□□□□ -1.72
RNF43-207ENST00000583753 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
RNF43-207ENST00000583753 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
RNF43-207ENST00000583753 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
RNF43-207ENST00000583753 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
RNF43-207ENST00000583753 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
RNF43-207ENST00000583753 PCLOQ9Y6V0 5065 aa4.25□□□□□ -1.73
RNF43-207ENST00000583753 MT1FP04733 61 aa4.24□□□□□ -1.73
RNF43-207ENST00000583753 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
RNF43-207ENST00000583753 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
RNF43-207ENST00000583753 INE1O15225 51 aa4.22□□□□□ -1.73
RNF43-207ENST00000583753 MT2AP02795 61 aa4.22□□□□□ -1.73
RNF43-207ENST00000583753 MT1HP80294 61 aa4.21□□□□□ -1.74
RNF43-207ENST00000583753 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
RNF43-207ENST00000583753 HMCN2Q8NDA2 5059 aa4.18□□□□□ -1.74
RNF43-207ENST00000583753 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
RNF43-207ENST00000583753 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
RNF43-207ENST00000583753 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
RNF43-207ENST00000583753 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
RNF43-207ENST00000583753 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.76
RNF43-207ENST00000583753 MT1XP80297 61 aa4.04□□□□□ -1.76
RNF43-207ENST00000583753 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
RNF43-207ENST00000583753 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
RNF43-207ENST00000583753 MT1BP07438 61 aa4.01□□□□□ -1.77
RNF43-207ENST00000583753 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
RNF43-207ENST00000583753 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
RNF43-207ENST00000583753 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
RNF43-207ENST00000583753 KMT2DO14686 5537 aa3.97□□□□□ -1.77
RNF43-207ENST00000583753 USH2AO75445 5202 aa3.96□□□□□ -1.78
RNF43-207ENST00000583753 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
RNF43-207ENST00000583753 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
RNF43-207ENST00000583753 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
RNF43-207ENST00000583753 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
RNF43-207ENST00000583753 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
RNF43-207ENST00000583753 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
RNF43-207ENST00000583753 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
RNF43-207ENST00000583753 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
RNF43-207ENST00000583753 LCE2BO14633 110 aa3.76□□□□□ -1.81
RNF43-207ENST00000583753 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
RNF43-207ENST00000583753 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
RNF43-207ENST00000583753 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
RNF43-207ENST00000583753 LCE2DQ5TA82 110 aaPredicted RBP3.71□□□□□ -1.82
RNF43-207ENST00000583753 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
RNF43-207ENST00000583753 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
RNF43-207ENST00000583753 MT1GP13640 62 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms