RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 IGKV2-30P06310 120 aa3.85□□□□□ -1.79
CCDC47-205ENST00000582331 WFDC13Q8IUB5 93 aa3.85□□□□□ -1.79
CCDC47-205ENST00000582331 MMP24-AS1A0A0U1RRL7 71 aa3.84□□□□□ -1.79
CCDC47-205ENST00000582331 H7BZZ5 65 aa3.84□□□□□ -1.79
CCDC47-205ENST00000582331 TMEM258P61165 79 aa3.84□□□□□ -1.79
CCDC47-205ENST00000582331 TMEM254Q8TBM7 123 aa3.84□□□□□ -1.79
CCDC47-205ENST00000582331 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
CCDC47-205ENST00000582331 NDUFB1O75438 58 aa3.83□□□□□ -1.8
CCDC47-205ENST00000582331 CASC2Q6XLA1 102 aa3.83□□□□□ -1.8
CCDC47-205ENST00000582331 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
CCDC47-205ENST00000582331 ZCCHC13Q8WW36 166 aaKnown RBP3.82□□□□□ -1.8
CCDC47-205ENST00000582331 C8orf17Q9NRJ1 99 aa3.82□□□□□ -1.8
CCDC47-205ENST00000582331 C5orf47Q569G3 176 aa3.81□□□□□ -1.8
CCDC47-205ENST00000582331 FAM236DA0A1B0GTK5 79 aa3.8□□□□□ -1.8
CCDC47-205ENST00000582331 NDUFC1O43677 76 aa3.8□□□□□ -1.8
CCDC47-205ENST00000582331 FAM236CP0DP71 79 aa3.8□□□□□ -1.8
CCDC47-205ENST00000582331 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
CCDC47-205ENST00000582331 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
CCDC47-205ENST00000582331 hDV103S1A0JD37 113 aa3.79□□□□□ -1.8
CCDC47-205ENST00000582331 RPS28P62857 69 aaKnown RBP3.79□□□□□ -1.8
CCDC47-205ENST00000582331 C20orf166-AS1Q96NR2 134 aa3.79□□□□□ -1.8
CCDC47-205ENST00000582331 NEBP20929 6669 aa3.76□□□□□ -1.81
CCDC47-205ENST00000582331 MRPL34Q9BQ48 92 aaKnown RBP3.76□□□□□ -1.81
CCDC47-205ENST00000582331 A8MUU9 505 aa3.75□□□□□ -1.81
CCDC47-205ENST00000582331 C8orf87E5RJ46 101 aa3.75□□□□□ -1.81
CCDC47-205ENST00000582331 H0Y9P7 68 aa3.75□□□□□ -1.81
CCDC47-205ENST00000582331 H3BPC8 53 aa3.75□□□□□ -1.81
CCDC47-205ENST00000582331 MP68P56378 58 aa3.75□□□□□ -1.81
CCDC47-205ENST00000582331 LINC00208Q96KT6 92 aa3.75□□□□□ -1.81
CCDC47-205ENST00000582331 TP53AIP1Q9HCN2 124 aa3.75□□□□□ -1.81
CCDC47-205ENST00000582331 RBM12B-AS1Q9P1G2 102 aa3.75□□□□□ -1.81
CCDC47-205ENST00000582331 TRAV22A0A0B4J277 110 aa3.74□□□□□ -1.81
CCDC47-205ENST00000582331 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
CCDC47-205ENST00000582331 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
CCDC47-205ENST00000582331 SERP1Q9Y6X1 66 aa3.74□□□□□ -1.81
CCDC47-205ENST00000582331 KRTAP16-1A8MUX0 517 aa3.72□□□□□ -1.81
CCDC47-205ENST00000582331 C1orf64Q8NEQ6 169 aa3.72□□□□□ -1.81
CCDC47-205ENST00000582331 LINC00313P59037 77 aa3.71□□□□□ -1.82
CCDC47-205ENST00000582331 Q5W150 140 aa3.71□□□□□ -1.82
CCDC47-205ENST00000582331 MPLKIPQ8TAP9 179 aa3.71□□□□□ -1.82
CCDC47-205ENST00000582331 NDUFS5O43920 106 aa3.7□□□□□ -1.82
CCDC47-205ENST00000582331 HRES1P13985 223 aa3.7□□□□□ -1.82
CCDC47-205ENST00000582331 CYP4F30PQ9H0H9 118 aa3.7□□□□□ -1.82
CCDC47-205ENST00000582331 SPANXA2-OT1Q8N9U9 137 aa3.69□□□□□ -1.82
CCDC47-205ENST00000582331 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
CCDC47-205ENST00000582331 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
CCDC47-205ENST00000582331 IGKV2D-30A0A075B6S6 120 aa3.65□□□□□ -1.83
CCDC47-205ENST00000582331 LOC101927531A0A1B0GV80 90 aa3.65□□□□□ -1.83
CCDC47-205ENST00000582331 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
CCDC47-205ENST00000582331 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
CCDC47-205ENST00000582331 C4orf26Q17RF5 130 aa3.6□□□□□ -1.83
CCDC47-205ENST00000582331 COA5Q86WW8 74 aa3.58□□□□□ -1.84
CCDC47-205ENST00000582331 A6NN06 94 aa3.57□□□□□ -1.84
CCDC47-205ENST00000582331 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
CCDC47-205ENST00000582331 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
CCDC47-205ENST00000582331 SPINK7P58062 85 aa3.56□□□□□ -1.84
CCDC47-205ENST00000582331 Q1T7F1 81 aa3.56□□□□□ -1.84
CCDC47-205ENST00000582331 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
CCDC47-205ENST00000582331 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
CCDC47-205ENST00000582331 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
CCDC47-205ENST00000582331 ACYP2P14621 99 aa3.52□□□□□ -1.85
CCDC47-205ENST00000582331 C7orf65Q6ZTY9 151 aa3.52□□□□□ -1.85
CCDC47-205ENST00000582331 KMT2DO14686 5537 aa3.51□□□□□ -1.85
CCDC47-205ENST00000582331 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
CCDC47-205ENST00000582331 V9GYY9 64 aa3.5□□□□□ -1.85
CCDC47-205ENST00000582331 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
CCDC47-205ENST00000582331 LINC01558Q9Y6Z2 57 aa3.49□□□□□ -1.85
CCDC47-205ENST00000582331 A8MUN3 132 aa3.48□□□□□ -1.85
CCDC47-205ENST00000582331 MT3P25713 68 aa3.48□□□□□ -1.85
CCDC47-205ENST00000582331 PSPHP1O15172 72 aa3.47□□□□□ -1.85
CCDC47-205ENST00000582331 MT1BP07438 61 aa3.47□□□□□ -1.85
CCDC47-205ENST00000582331 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
CCDC47-205ENST00000582331 H1FX-AS1Q4G0G2 97 aa3.47□□□□□ -1.85
CCDC47-205ENST00000582331 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
CCDC47-205ENST00000582331 Q5VV11 94 aa3.47□□□□□ -1.85
CCDC47-205ENST00000582331 CHKB-CPT1BH3BT56 60 aa3.45□□□□□ -1.86
CCDC47-205ENST00000582331 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
CCDC47-205ENST00000582331 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CCDC47-205ENST00000582331 SPRR2EP22531 72 aa3.42□□□□□ -1.86
CCDC47-205ENST00000582331 SPRR2BP35325 72 aa3.42□□□□□ -1.86
CCDC47-205ENST00000582331 SPRR2AP35326 72 aa3.42□□□□□ -1.86
CCDC47-205ENST00000582331 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
CCDC47-205ENST00000582331 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
CCDC47-205ENST00000582331 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
CCDC47-205ENST00000582331 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
CCDC47-205ENST00000582331 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
CCDC47-205ENST00000582331 LCA10Q71F78 164 aa3.37□□□□□ -1.87
CCDC47-205ENST00000582331 A8MU10 97 aa3.36□□□□□ -1.87
CCDC47-205ENST00000582331 A0A1B0GU69 56 aa3.35□□□□□ -1.87
CCDC47-205ENST00000582331 A6NED7 52 aa3.35□□□□□ -1.87
CCDC47-205ENST00000582331 SPTSSBQ8NFR3 76 aa3.35□□□□□ -1.87
CCDC47-205ENST00000582331 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
CCDC47-205ENST00000582331 SPRR2DP22532 72 aa3.31□□□□□ -1.88
CCDC47-205ENST00000582331 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
CCDC47-205ENST00000582331 CSAG1Q6PB30 78 aa3.29□□□□□ -1.88
CCDC47-205ENST00000582331 SEC61GP60059 68 aa3.28□□□□□ -1.88
CCDC47-205ENST00000582331 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
CCDC47-205ENST00000582331 UQCR11O14957 56 aa3.27□□□□□ -1.89
CCDC47-205ENST00000582331 S4R3F8 94 aa3.27□□□□□ -1.89
CCDC47-205ENST00000582331 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms