RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 A0A096LNI7 61 aa4.47□□□□□ -1.69
TVP23C-208ENST00000581273 KRTAP10-1P60331 282 aa4.47□□□□□ -1.69
TVP23C-208ENST00000581273 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
TVP23C-208ENST00000581273 LINC00483Q53H64 154 aa4.46□□□□□ -1.7
TVP23C-208ENST00000581273 Q6ZRN7 208 aaPredicted RBP4.45□□□□□ -1.7
TVP23C-208ENST00000581273 A0A087WTM6 91 aa4.44□□□□□ -1.7
TVP23C-208ENST00000581273 KRTAP13-1Q8IUC0 172 aa4.42□□□□□ -1.7
TVP23C-208ENST00000581273 IGLV5-52A0A0A0MRZ9 124 aa4.41□□□□□ -1.7
TVP23C-208ENST00000581273 IGLV9-49A0A0B4J1Y8 123 aa4.41□□□□□ -1.7
TVP23C-208ENST00000581273 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
TVP23C-208ENST00000581273 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
TVP23C-208ENST00000581273 ADM2Q7Z4H4 148 aa4.4□□□□□ -1.71
TVP23C-208ENST00000581273 TNXBP22105 4242 aa4.4□□□□□ -1.71
TVP23C-208ENST00000581273 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.71
TVP23C-208ENST00000581273 IGLV7-43P04211 117 aa4.38□□□□□ -1.71
TVP23C-208ENST00000581273 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
TVP23C-208ENST00000581273 ZNF861PO60384 105 aa4.37□□□□□ -1.71
TVP23C-208ENST00000581273 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
TVP23C-208ENST00000581273 K7ERS5 55 aa4.36□□□□□ -1.71
TVP23C-208ENST00000581273 Q5W150 140 aa4.36□□□□□ -1.71
TVP23C-208ENST00000581273 SSBP3-AS1Q7Z2R9 100 aa4.36□□□□□ -1.71
TVP23C-208ENST00000581273 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
TVP23C-208ENST00000581273 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
TVP23C-208ENST00000581273 DNAH8Q96JB1 4490 aa4.33□□□□□ -1.72
TVP23C-208ENST00000581273 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
TVP23C-208ENST00000581273 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
TVP23C-208ENST00000581273 CHTF8P0CG12 524 aa4.32□□□□□ -1.72
TVP23C-208ENST00000581273 ROMO1P60602 79 aa4.32□□□□□ -1.72
TVP23C-208ENST00000581273 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
TVP23C-208ENST00000581273 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
TVP23C-208ENST00000581273 SPINK6Q6UWN8 80 aa4.3□□□□□ -1.72
TVP23C-208ENST00000581273 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
TVP23C-208ENST00000581273 A8MUU9 505 aa4.28□□□□□ -1.72
TVP23C-208ENST00000581273 Q6ZSA8 131 aa4.28□□□□□ -1.72
TVP23C-208ENST00000581273 LPAP08519 4548 aa4.27□□□□□ -1.73
TVP23C-208ENST00000581273 CIRBP-AS1Q8TBR5 109 aa4.27□□□□□ -1.73
TVP23C-208ENST00000581273 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
TVP23C-208ENST00000581273 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
TVP23C-208ENST00000581273 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
TVP23C-208ENST00000581273 A0A1B0GU33 70 aa4.23□□□□□ -1.73
TVP23C-208ENST00000581273 PSORS1C2Q9UIG4 136 aa4.23□□□□□ -1.73
TVP23C-208ENST00000581273 PANO1I0J062 215 aa4.22□□□□□ -1.73
TVP23C-208ENST00000581273 MT1HL1P0DM35 61 aa4.21□□□□□ -1.74
TVP23C-208ENST00000581273 LINC00304Q8N9R0 145 aa4.21□□□□□ -1.74
TVP23C-208ENST00000581273 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
TVP23C-208ENST00000581273 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
TVP23C-208ENST00000581273 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
TVP23C-208ENST00000581273 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
TVP23C-208ENST00000581273 H0YAA0 97 aa4.16□□□□□ -1.74
TVP23C-208ENST00000581273 SPINK1P00995 79 aa4.16□□□□□ -1.74
TVP23C-208ENST00000581273 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
TVP23C-208ENST00000581273 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
TVP23C-208ENST00000581273 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
TVP23C-208ENST00000581273 RPS29P62273 56 aaKnown RBP4.1□□□□□ -1.75
TVP23C-208ENST00000581273 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
TVP23C-208ENST00000581273 KRTAP10-8P60410 259 aa4.07□□□□□ -1.76
TVP23C-208ENST00000581273 P0C880 135 aa4.06□□□□□ -1.76
TVP23C-208ENST00000581273 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
TVP23C-208ENST00000581273 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
TVP23C-208ENST00000581273 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
TVP23C-208ENST00000581273 TYMSOSQ8TAI1 123 aa4.03□□□□□ -1.76
TVP23C-208ENST00000581273 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
TVP23C-208ENST00000581273 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
TVP23C-208ENST00000581273 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
TVP23C-208ENST00000581273 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
TVP23C-208ENST00000581273 KRTAP1-4P0C5Y4 121 aa3.93□□□□□ -1.78
TVP23C-208ENST00000581273 TPRXLQ17RH7 258 aa3.92□□□□□ -1.78
TVP23C-208ENST00000581273 SSPOA2VEC9 5147 aa3.9□□□□□ -1.78
TVP23C-208ENST00000581273 S4R3F8 94 aa3.87□□□□□ -1.79
TVP23C-208ENST00000581273 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
TVP23C-208ENST00000581273 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
TVP23C-208ENST00000581273 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
TVP23C-208ENST00000581273 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
TVP23C-208ENST00000581273 A0A0D9SG42 100 aa3.84□□□□□ -1.79
TVP23C-208ENST00000581273 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.79
TVP23C-208ENST00000581273 M0QZ58 72 aa3.83□□□□□ -1.8
TVP23C-208ENST00000581273 USH2AO75445 5202 aa3.83□□□□□ -1.8
TVP23C-208ENST00000581273 C9orf92A6NGG3 77 aa3.8□□□□□ -1.8
TVP23C-208ENST00000581273 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
TVP23C-208ENST00000581273 KRTAP13-4Q3LI77 160 aa3.76□□□□□ -1.81
TVP23C-208ENST00000581273 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
TVP23C-208ENST00000581273 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
TVP23C-208ENST00000581273 KRTAP12-1P59990 96 aa3.74□□□□□ -1.81
TVP23C-208ENST00000581273 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
TVP23C-208ENST00000581273 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
TVP23C-208ENST00000581273 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
TVP23C-208ENST00000581273 PLAC4Q8WY50 150 aa3.72□□□□□ -1.81
TVP23C-208ENST00000581273 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
TVP23C-208ENST00000581273 NEBP20929 6669 aa3.7□□□□□ -1.82
TVP23C-208ENST00000581273 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
TVP23C-208ENST00000581273 MT1HP80294 61 aa3.64□□□□□ -1.83
TVP23C-208ENST00000581273 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
TVP23C-208ENST00000581273 CAMK2N1Q7Z7J9 78 aa3.63□□□□□ -1.83
TVP23C-208ENST00000581273 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
TVP23C-208ENST00000581273 M0R2T5 61 aa3.59□□□□□ -1.83
TVP23C-208ENST00000581273 KRTAP19-2Q3LHN2 52 aa3.56□□□□□ -1.84
TVP23C-208ENST00000581273 R4GN34 69 aa3.56□□□□□ -1.84
TVP23C-208ENST00000581273 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
TVP23C-208ENST00000581273 KMT2DO14686 5537 aa3.52□□□□□ -1.85
TVP23C-208ENST00000581273 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms