RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 MP68P56378 58 aa11.85□□□□□ -0.51
LIMD2-208ENST00000579814 OCR1Q9BZK8 76 aa11.85□□□□□ -0.51
LIMD2-208ENST00000579814 KLKP1Q107X0 134 aa11.84□□□□□ -0.51
LIMD2-208ENST00000579814 SPRR2GQ9BYE4 73 aa11.82□□□□□ -0.52
LIMD2-208ENST00000579814 A8MUN3 132 aa11.81□□□□□ -0.52
LIMD2-208ENST00000579814 NDUFC1O43677 76 aa11.81□□□□□ -0.52
LIMD2-208ENST00000579814 IMUPQ9GZP8 106 aa11.77□□□□□ -0.53
LIMD2-208ENST00000579814 Q5VV11 94 aa11.76□□□□□ -0.53
LIMD2-208ENST00000579814 KRTAP19-8Q3LI54 63 aa11.72□□□□□ -0.53
LIMD2-208ENST00000579814 SCGB1A1P11684 91 aa11.71□□□□□ -0.53
LIMD2-208ENST00000579814 CRIPTQ9P021 101 aa11.71□□□□□ -0.53
LIMD2-208ENST00000579814 MACF1Q9UPN3 7388 aaKnown RBP11.7□□□□□ -0.54
LIMD2-208ENST00000579814 MT1BP07438 61 aa11.7□□□□□ -0.54
LIMD2-208ENST00000579814 H3BPC8 53 aa11.68□□□□□ -0.54
LIMD2-208ENST00000579814 H0YAA0 97 aa11.65□□□□□ -0.54
LIMD2-208ENST00000579814 A6NN06 94 aa11.6□□□□□ -0.55
LIMD2-208ENST00000579814 SYNE2Q8WXH0 6885 aaKnown RBP11.59□□□□□ -0.55
LIMD2-208ENST00000579814 ADM2Q7Z4H4 148 aa11.53□□□□□ -0.56
LIMD2-208ENST00000579814 K7ERU9 68 aa11.46□□□□□ -0.57
LIMD2-208ENST00000579814 DMAC1Q96GE9 116 aa11.46□□□□□ -0.57
LIMD2-208ENST00000579814 KRTAP10-5P60370 271 aa11.44□□□□□ -0.58
LIMD2-208ENST00000579814 KRTAP6-3Q3LI67 103 aa11.44□□□□□ -0.58
LIMD2-208ENST00000579814 MT-ATP8P03928 68 aa11.43□□□□□ -0.58
LIMD2-208ENST00000579814 SMIM20Q8N5G0 67 aa11.38□□□□□ -0.59
LIMD2-208ENST00000579814 TRAV7A0A075B6U4 112 aa11.35□□□□□ -0.59
LIMD2-208ENST00000579814 C20orf197Q8N268 126 aa11.31□□□□□ -0.6
LIMD2-208ENST00000579814 ACYP2P14621 99 aa11.25□□□□□ -0.61
LIMD2-208ENST00000579814 R4GN34 69 aa11.25□□□□□ -0.61
LIMD2-208ENST00000579814 P0C880 135 aa11.24□□□□□ -0.61
LIMD2-208ENST00000579814 PLAC4Q8WY50 150 aa11.17□□□□□ -0.62
LIMD2-208ENST00000579814 M0QZ58 72 aa11.15□□□□□ -0.62
LIMD2-208ENST00000579814 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
LIMD2-208ENST00000579814 SPTSSBQ8NFR3 76 aa11.12□□□□□ -0.63
LIMD2-208ENST00000579814 PRO2289Q9P1D8 64 aa11.11□□□□□ -0.63
LIMD2-208ENST00000579814 SNURFQ9Y675 71 aa11.09□□□□□ -0.63
LIMD2-208ENST00000579814 CHKB-CPT1BH3BT56 60 aa11.06□□□□□ -0.64
LIMD2-208ENST00000579814 MT1XP80297 61 aa11□□□□□ -0.65
LIMD2-208ENST00000579814 LINC01554Q52M75 96 aa10.99□□□□□ -0.65
LIMD2-208ENST00000579814 SERP2Q8N6R1 65 aa10.98□□□□□ -0.65
LIMD2-208ENST00000579814 SPANXA2-OT1Q8N9U9 137 aa10.95□□□□□ -0.66
LIMD2-208ENST00000579814 KRTAP5-9P26371 169 aa10.92□□□□□ -0.66
LIMD2-208ENST00000579814 NEBP20929 6669 aa10.91□□□□□ -0.66
LIMD2-208ENST00000579814 MUC12Q9UKN1 5478 aa10.88□□□□□ -0.67
LIMD2-208ENST00000579814 KMT2DO14686 5537 aa10.75□□□□□ -0.69
LIMD2-208ENST00000579814 KRTAP12-2P59991 146 aa10.74□□□□□ -0.69
LIMD2-208ENST00000579814 COX7CP15954 63 aa10.65□□□□□ -0.7
LIMD2-208ENST00000579814 KRTAP8-1Q8IUC2 63 aa10.65□□□□□ -0.7
LIMD2-208ENST00000579814 SPRR2FQ96RM1 72 aa10.65□□□□□ -0.7
LIMD2-208ENST00000579814 COA5Q86WW8 74 aa10.63□□□□□ -0.71
LIMD2-208ENST00000579814 MDN1Q9NU22 5596 aa10.62□□□□□ -0.71
LIMD2-208ENST00000579814 KRTAP20-1Q3LI63 56 aa10.55□□□□□ -0.72
LIMD2-208ENST00000579814 KRTAP13-4Q3LI77 160 aa10.51□□□□□ -0.73
LIMD2-208ENST00000579814 KRTAP4-8A0A0G2JLE6 195 aa10.5□□□□□ -0.73
LIMD2-208ENST00000579814 SEC61GP60059 68 aa10.5□□□□□ -0.73
LIMD2-208ENST00000579814 KRTAP10-7P60409 375 aaPredicted RBP10.5□□□□□ -0.73
LIMD2-208ENST00000579814 KRTAP4-8Q9BYQ9 185 aa10.5□□□□□ -0.73
LIMD2-208ENST00000579814 SPRR2EP22531 72 aa10.47□□□□□ -0.73
LIMD2-208ENST00000579814 SPRR2BP35325 72 aa10.47□□□□□ -0.73
LIMD2-208ENST00000579814 SPRR2AP35326 72 aa10.47□□□□□ -0.73
LIMD2-208ENST00000579814 SERP1Q9Y6X1 66 aa10.47□□□□□ -0.73
LIMD2-208ENST00000579814 H7BZZ5 65 aa10.46□□□□□ -0.73
LIMD2-208ENST00000579814 KRTAP10-12P60413 245 aa10.45□□□□□ -0.74
LIMD2-208ENST00000579814 CYSTM1Q9H1C7 97 aa10.41□□□□□ -0.74
LIMD2-208ENST00000579814 CAMK2N1Q7Z7J9 78 aa10.37□□□□□ -0.75
LIMD2-208ENST00000579814 LCE1AQ5T7P2 110 aa10.33□□□□□ -0.76
LIMD2-208ENST00000579814 KRTAP2-3P0C7H8 128 aa10.32□□□□□ -0.76
LIMD2-208ENST00000579814 KRTAP2-4Q9BYR9 128 aa10.32□□□□□ -0.76
LIMD2-208ENST00000579814 ANAPC13Q9BS18 74 aa10.31□□□□□ -0.76
LIMD2-208ENST00000579814 A0A1B0GU33 70 aa10.28□□□□□ -0.76
LIMD2-208ENST00000579814 A0A0D9SG42 100 aa10.26□□□□□ -0.77
LIMD2-208ENST00000579814 SPATA8Q6RVD6 105 aa10.23□□□□□ -0.77
LIMD2-208ENST00000579814 SPINT4Q6UDR6 99 aa10.13□□□□□ -0.79
LIMD2-208ENST00000579814 A0A1B0GU69 56 aa10.12□□□□□ -0.79
LIMD2-208ENST00000579814 SPRR2DP22532 72 aa10.12□□□□□ -0.79
LIMD2-208ENST00000579814 CCDC179H3BU77 68 aa10.08□□□□□ -0.8
LIMD2-208ENST00000579814 KRTAP12-1P59990 96 aa10.02□□□□□ -0.81
LIMD2-208ENST00000579814 SMIM26A0A096LP01 95 aa10□□□□□ -0.81
LIMD2-208ENST00000579814 KRTAP2-2Q9BYT5 123 aa10□□□□□ -0.81
LIMD2-208ENST00000579814 KRTAP2-1Q9BYU5 128 aa10□□□□□ -0.81
LIMD2-208ENST00000579814 ATP5EP56381 51 aaPredicted RBP9.98□□□□□ -0.81
LIMD2-208ENST00000579814 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
LIMD2-208ENST00000579814 A8MU10 97 aa9.86□□□□□ -0.83
LIMD2-208ENST00000579814 LCE3BQ5TA77 95 aa9.84□□□□□ -0.83
LIMD2-208ENST00000579814 KRTAP19-7Q3SYF9 63 aa9.82□□□□□ -0.84
LIMD2-208ENST00000579814 MT1EP04732 61 aa9.75□□□□□ -0.85
LIMD2-208ENST00000579814 LINC01558Q9Y6Z2 57 aa9.74□□□□□ -0.85
LIMD2-208ENST00000579814 TMEM258P61165 79 aa9.72□□□□□ -0.85
LIMD2-208ENST00000579814 LCE5AQ5TCM9 118 aa9.67□□□□□ -0.86
LIMD2-208ENST00000579814 KRTAP19-3Q7Z4W3 81 aa9.66□□□□□ -0.86
LIMD2-208ENST00000579814 KRTAP19-5Q3LI72 72 aa9.62□□□□□ -0.87
LIMD2-208ENST00000579814 TNP1P09430 55 aa9.59□□□□□ -0.87
LIMD2-208ENST00000579814 C10orf95Q9H7T3 257 aa9.58□□□□□ -0.88
LIMD2-208ENST00000579814 UQCR11O14957 56 aa9.52□□□□□ -0.89
LIMD2-208ENST00000579814 MT1GP13640 62 aa9.47□□□□□ -0.89
LIMD2-208ENST00000579814 LCE3AQ5TA76 89 aa9.44□□□□□ -0.9
LIMD2-208ENST00000579814 PP632Q6XCG6 107 aa9.41□□□□□ -0.9
LIMD2-208ENST00000579814 DSTQ03001 7570 aaKnown RBP9.36□□□□□ -0.91
LIMD2-208ENST00000579814 MT1LQ93083 61 aa9.33□□□□□ -0.92
LIMD2-208ENST00000579814 MIR22HGQ0VDD5 57 aa9.31□□□□□ -0.92
LIMD2-208ENST00000579814 MT1MQ8N339 61 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms