RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
CCR7-203ENST00000579344 FAT2Q9NYQ8 4349 aa8.08□□□□□ -1.12
CCR7-203ENST00000579344 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
CCR7-203ENST00000579344 PKD1P98161 4303 aa8.05□□□□□ -1.12
CCR7-203ENST00000579344 KRTAP12-1P59990 96 aa8.04□□□□□ -1.12
CCR7-203ENST00000579344 PKHD1L1Q86WI1 4243 aa8.04□□□□□ -1.12
CCR7-203ENST00000579344 KMT2CQ8NEZ4 4911 aaKnown RBP8.03□□□□□ -1.12
CCR7-203ENST00000579344 RYR2Q92736 4967 aa8.03□□□□□ -1.12
CCR7-203ENST00000579344 M0QZ58 72 aa7.97□□□□□ -1.13
CCR7-203ENST00000579344 KRTAP10-4P60372 401 aaPredicted RBP7.97□□□□□ -1.13
CCR7-203ENST00000579344 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
CCR7-203ENST00000579344 RYR3Q15413 4870 aa7.88□□□□□ -1.15
CCR7-203ENST00000579344 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
CCR7-203ENST00000579344 DYNC1H1Q14204 4646 aaKnown RBP7.84□□□□□ -1.15
CCR7-203ENST00000579344 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
CCR7-203ENST00000579344 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.17
CCR7-203ENST00000579344 APOBP04114 4563 aaKnown RBP7.77□□□□□ -1.17
CCR7-203ENST00000579344 A0A0A0MQY5 61 aa7.76□□□□□ -1.17
CCR7-203ENST00000579344 A0A1B0GVY2 172 aa7.75□□□□□ -1.17
CCR7-203ENST00000579344 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
CCR7-203ENST00000579344 LUZP6Q538Z0 58 aa7.69□□□□□ -1.18
CCR7-203ENST00000579344 LRP1Q07954 4544 aaKnown RBP7.65□□□□□ -1.18
CCR7-203ENST00000579344 FAT1Q14517 4588 aa7.64□□□□□ -1.19
CCR7-203ENST00000579344 TNXBP22105 4242 aa7.62□□□□□ -1.19
CCR7-203ENST00000579344 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
CCR7-203ENST00000579344 EPPK1P58107 5090 aaKnown RBP7.6□□□□□ -1.19
CCR7-203ENST00000579344 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
CCR7-203ENST00000579344 HSPG2P98160 4391 aa7.56□□□□□ -1.2
CCR7-203ENST00000579344 RYR1P21817 5038 aa7.55□□□□□ -1.2
CCR7-203ENST00000579344 KIAA1109Q2LD37 5005 aa7.51□□□□□ -1.21
CCR7-203ENST00000579344 R4GN34 69 aa7.49□□□□□ -1.21
CCR7-203ENST00000579344 KRTAP17-1Q9BYP8 105 aa7.43□□□□□ -1.22
CCR7-203ENST00000579344 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
CCR7-203ENST00000579344 Q5VSD8 79 aa7.32□□□□□ -1.24
CCR7-203ENST00000579344 MYCBP2O75592 4640 aa7.31□□□□□ -1.24
CCR7-203ENST00000579344 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
CCR7-203ENST00000579344 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
CCR7-203ENST00000579344 MT1HL1P0DM35 61 aa7.26□□□□□ -1.25
CCR7-203ENST00000579344 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
CCR7-203ENST00000579344 HERC2O95714 4834 aa7.2□□□□□ -1.26
CCR7-203ENST00000579344 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
CCR7-203ENST00000579344 ABCA13Q86UQ4 5058 aa7.19□□□□□ -1.26
CCR7-203ENST00000579344 CAMK2N1Q7Z7J9 78 aa7.15□□□□□ -1.27
CCR7-203ENST00000579344 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
CCR7-203ENST00000579344 TNP1P09430 55 aa7.05□□□□□ -1.28
CCR7-203ENST00000579344 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
CCR7-203ENST00000579344 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
CCR7-203ENST00000579344 LPAP08519 4548 aa6.95□□□□□ -1.3
CCR7-203ENST00000579344 KRTAP19-2Q3LHN2 52 aa6.93□□□□□ -1.3
CCR7-203ENST00000579344 LRP2P98164 4655 aa6.92□□□□□ -1.3
CCR7-203ENST00000579344 INE1O15225 51 aa6.85□□□□□ -1.31
CCR7-203ENST00000579344 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
CCR7-203ENST00000579344 J3QL48 77 aa6.81□□□□□ -1.32
CCR7-203ENST00000579344 HERC1Q15751 4861 aa6.79□□□□□ -1.32
CCR7-203ENST00000579344 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
CCR7-203ENST00000579344 HMCN2Q8NDA2 5059 aa6.67□□□□□ -1.34
CCR7-203ENST00000579344 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
CCR7-203ENST00000579344 FLGP20930 4061 aaPredicted RBP6.58□□□□□ -1.36
CCR7-203ENST00000579344 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
CCR7-203ENST00000579344 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
CCR7-203ENST00000579344 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
CCR7-203ENST00000579344 MUC2Q02817 5179 aa6.39□□□□□ -1.39
CCR7-203ENST00000579344 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
CCR7-203ENST00000579344 RNF213Q63HN8 5207 aa6.34□□□□□ -1.39
CCR7-203ENST00000579344 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
CCR7-203ENST00000579344 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
CCR7-203ENST00000579344 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
CCR7-203ENST00000579344 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
CCR7-203ENST00000579344 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
CCR7-203ENST00000579344 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
CCR7-203ENST00000579344 MT1XP80297 61 aa6.11□□□□□ -1.43
CCR7-203ENST00000579344 MT2AP02795 61 aa6.06□□□□□ -1.44
CCR7-203ENST00000579344 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
CCR7-203ENST00000579344 MT1FP04733 61 aa6.05□□□□□ -1.44
CCR7-203ENST00000579344 MT1BP07438 61 aa6.02□□□□□ -1.44
CCR7-203ENST00000579344 MT1HP80294 61 aa6□□□□□ -1.45
CCR7-203ENST00000579344 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
CCR7-203ENST00000579344 M0R2T5 61 aa5.95□□□□□ -1.46
CCR7-203ENST00000579344 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
CCR7-203ENST00000579344 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
CCR7-203ENST00000579344 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
CCR7-203ENST00000579344 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
CCR7-203ENST00000579344 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
CCR7-203ENST00000579344 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
CCR7-203ENST00000579344 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
CCR7-203ENST00000579344 LCE2AQ5TA79 106 aaPredicted RBP5.75□□□□□ -1.49
CCR7-203ENST00000579344 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
CCR7-203ENST00000579344 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
CCR7-203ENST00000579344 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
CCR7-203ENST00000579344 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
CCR7-203ENST00000579344 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
CCR7-203ENST00000579344 LCE2BO14633 110 aa5.41□□□□□ -1.54
CCR7-203ENST00000579344 USH2AO75445 5202 aa5.37□□□□□ -1.55
CCR7-203ENST00000579344 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
CCR7-203ENST00000579344 LCE2DQ5TA82 110 aaPredicted RBP5.36□□□□□ -1.55
CCR7-203ENST00000579344 MT1LQ93083 61 aa5.34□□□□□ -1.55
CCR7-203ENST00000579344 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
CCR7-203ENST00000579344 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
CCR7-203ENST00000579344 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
CCR7-203ENST00000579344 MT1EP04732 61 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms