RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
DDX42-208ENST00000578681 KRTAP10-8P60410 259 aa8.78□□□□□ -1
DDX42-208ENST00000578681 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
DDX42-208ENST00000578681 XP32Q5T750 250 aa8.76□□□□□ -1.01
DDX42-208ENST00000578681 H0YAA0 97 aa8.76□□□□□ -1.01
DDX42-208ENST00000578681 S4R3F8 94 aa8.74□□□□□ -1.01
DDX42-208ENST00000578681 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
DDX42-208ENST00000578681 KMT2CQ8NEZ4 4911 aaKnown RBP8.72□□□□□ -1.01
DDX42-208ENST00000578681 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
DDX42-208ENST00000578681 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
DDX42-208ENST00000578681 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
DDX42-208ENST00000578681 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
DDX42-208ENST00000578681 PKD1P98161 4303 aa8.66□□□□□ -1.02
DDX42-208ENST00000578681 LRP1Q07954 4544 aaKnown RBP8.65□□□□□ -1.02
DDX42-208ENST00000578681 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
DDX42-208ENST00000578681 RYR2Q92736 4967 aa8.57□□□□□ -1.04
DDX42-208ENST00000578681 RYR3Q15413 4870 aa8.54□□□□□ -1.04
DDX42-208ENST00000578681 M0R2T5 61 aa8.54□□□□□ -1.04
DDX42-208ENST00000578681 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
DDX42-208ENST00000578681 MT1HL1P0DM35 61 aa8.52□□□□□ -1.05
DDX42-208ENST00000578681 RYR1P21817 5038 aa8.52□□□□□ -1.05
DDX42-208ENST00000578681 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
DDX42-208ENST00000578681 TPRXLQ17RH7 258 aa8.46□□□□□ -1.05
DDX42-208ENST00000578681 KRTAP17-1Q9BYP8 105 aa8.45□□□□□ -1.06
DDX42-208ENST00000578681 R4GN34 69 aa8.35□□□□□ -1.07
DDX42-208ENST00000578681 M0QZ58 72 aa8.33□□□□□ -1.08
DDX42-208ENST00000578681 KRTAP15-1Q3LI76 137 aa8.33□□□□□ -1.08
DDX42-208ENST00000578681 HSPG2P98160 4391 aa8.27□□□□□ -1.09
DDX42-208ENST00000578681 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
DDX42-208ENST00000578681 CAMK2N1Q7Z7J9 78 aa8.2□□□□□ -1.1
DDX42-208ENST00000578681 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
DDX42-208ENST00000578681 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
DDX42-208ENST00000578681 KRTAP13-4Q3LI77 160 aa8.15□□□□□ -1.1
DDX42-208ENST00000578681 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.11
DDX42-208ENST00000578681 LRP2P98164 4655 aa8.14□□□□□ -1.11
DDX42-208ENST00000578681 PKHD1L1Q86WI1 4243 aa8.12□□□□□ -1.11
DDX42-208ENST00000578681 KRTAP3-2Q9BYR7 98 aa8.04□□□□□ -1.12
DDX42-208ENST00000578681 LPAP08519 4548 aa8.01□□□□□ -1.13
DDX42-208ENST00000578681 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
DDX42-208ENST00000578681 TNXBP22105 4242 aa7.99□□□□□ -1.13
DDX42-208ENST00000578681 HERC2O95714 4834 aa7.98□□□□□ -1.13
DDX42-208ENST00000578681 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
DDX42-208ENST00000578681 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
DDX42-208ENST00000578681 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
DDX42-208ENST00000578681 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
DDX42-208ENST00000578681 MUC2Q02817 5179 aa7.64□□□□□ -1.19
DDX42-208ENST00000578681 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
DDX42-208ENST00000578681 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
DDX42-208ENST00000578681 HERC1Q15751 4861 aa7.56□□□□□ -1.2
DDX42-208ENST00000578681 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
DDX42-208ENST00000578681 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
DDX42-208ENST00000578681 TNP1P09430 55 aa7.47□□□□□ -1.21
DDX42-208ENST00000578681 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
DDX42-208ENST00000578681 PCLOQ9Y6V0 5065 aa7.35□□□□□ -1.23
DDX42-208ENST00000578681 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
DDX42-208ENST00000578681 UBR4Q5T4S7 5183 aa7.23□□□□□ -1.25
DDX42-208ENST00000578681 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.26
DDX42-208ENST00000578681 MUC17Q685J3 4493 aa7.2□□□□□ -1.26
DDX42-208ENST00000578681 MT1HP80294 61 aa7.2□□□□□ -1.26
DDX42-208ENST00000578681 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.26
DDX42-208ENST00000578681 INE1O15225 51 aa7.14□□□□□ -1.27
DDX42-208ENST00000578681 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
DDX42-208ENST00000578681 FLGP20930 4061 aaPredicted RBP7.09□□□□□ -1.27
DDX42-208ENST00000578681 MT2AP02795 61 aa7.06□□□□□ -1.28
DDX42-208ENST00000578681 MT1FP04733 61 aa7.06□□□□□ -1.28
DDX42-208ENST00000578681 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
DDX42-208ENST00000578681 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
DDX42-208ENST00000578681 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
DDX42-208ENST00000578681 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.32
DDX42-208ENST00000578681 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
DDX42-208ENST00000578681 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
DDX42-208ENST00000578681 MT1BP07438 61 aa6.63□□□□□ -1.35
DDX42-208ENST00000578681 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
DDX42-208ENST00000578681 KRTAP19-8Q3LI54 63 aa6.59□□□□□ -1.35
DDX42-208ENST00000578681 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
DDX42-208ENST00000578681 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
DDX42-208ENST00000578681 MT1XP80297 61 aa6.55□□□□□ -1.36
DDX42-208ENST00000578681 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
DDX42-208ENST00000578681 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
DDX42-208ENST00000578681 USH2AO75445 5202 aa6.51□□□□□ -1.37
DDX42-208ENST00000578681 LCE2BO14633 110 aa6.43□□□□□ -1.38
DDX42-208ENST00000578681 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
DDX42-208ENST00000578681 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
DDX42-208ENST00000578681 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
DDX42-208ENST00000578681 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
DDX42-208ENST00000578681 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
DDX42-208ENST00000578681 KMT2DO14686 5537 aa6.25□□□□□ -1.41
DDX42-208ENST00000578681 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
DDX42-208ENST00000578681 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
DDX42-208ENST00000578681 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
DDX42-208ENST00000578681 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.45
DDX42-208ENST00000578681 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
DDX42-208ENST00000578681 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
DDX42-208ENST00000578681 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
DDX42-208ENST00000578681 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
DDX42-208ENST00000578681 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
DDX42-208ENST00000578681 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
DDX42-208ENST00000578681 MT1EP04732 61 aa5.72□□□□□ -1.49
DDX42-208ENST00000578681 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.49
DDX42-208ENST00000578681 MT1LQ93083 61 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms