RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
DDX42-208ENST00000578681 KRTAP10-8P60410 259 aa8.78□□□□□ -1
DDX42-208ENST00000578681 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
DDX42-208ENST00000578681 XP32Q5T750 250 aa8.76□□□□□ -1.01
DDX42-208ENST00000578681 H0YAA0 97 aa8.76□□□□□ -1.01
DDX42-208ENST00000578681 S4R3F8 94 aa8.74□□□□□ -1.01
DDX42-208ENST00000578681 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
DDX42-208ENST00000578681 KMT2CQ8NEZ4 4911 aaKnown RBP8.72□□□□□ -1.01
DDX42-208ENST00000578681 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
DDX42-208ENST00000578681 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
DDX42-208ENST00000578681 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
DDX42-208ENST00000578681 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
DDX42-208ENST00000578681 PKD1P98161 4303 aa8.66□□□□□ -1.02
DDX42-208ENST00000578681 LRP1Q07954 4544 aaKnown RBP8.65□□□□□ -1.02
DDX42-208ENST00000578681 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
DDX42-208ENST00000578681 RYR2Q92736 4967 aa8.57□□□□□ -1.04
DDX42-208ENST00000578681 RYR3Q15413 4870 aa8.54□□□□□ -1.04
DDX42-208ENST00000578681 M0R2T5 61 aa8.54□□□□□ -1.04
DDX42-208ENST00000578681 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
DDX42-208ENST00000578681 MT1HL1P0DM35 61 aa8.52□□□□□ -1.05
DDX42-208ENST00000578681 RYR1P21817 5038 aa8.52□□□□□ -1.05
DDX42-208ENST00000578681 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
DDX42-208ENST00000578681 TPRXLQ17RH7 258 aa8.46□□□□□ -1.05
DDX42-208ENST00000578681 KRTAP17-1Q9BYP8 105 aa8.45□□□□□ -1.06
DDX42-208ENST00000578681 R4GN34 69 aa8.35□□□□□ -1.07
DDX42-208ENST00000578681 M0QZ58 72 aa8.33□□□□□ -1.08
DDX42-208ENST00000578681 KRTAP15-1Q3LI76 137 aa8.33□□□□□ -1.08
DDX42-208ENST00000578681 HSPG2P98160 4391 aa8.27□□□□□ -1.09
DDX42-208ENST00000578681 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
DDX42-208ENST00000578681 CAMK2N1Q7Z7J9 78 aa8.2□□□□□ -1.1
DDX42-208ENST00000578681 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
DDX42-208ENST00000578681 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
DDX42-208ENST00000578681 KRTAP13-4Q3LI77 160 aa8.15□□□□□ -1.1
DDX42-208ENST00000578681 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.11
DDX42-208ENST00000578681 LRP2P98164 4655 aa8.14□□□□□ -1.11
DDX42-208ENST00000578681 PKHD1L1Q86WI1 4243 aa8.12□□□□□ -1.11
DDX42-208ENST00000578681 KRTAP3-2Q9BYR7 98 aa8.04□□□□□ -1.12
DDX42-208ENST00000578681 LPAP08519 4548 aa8.01□□□□□ -1.13
DDX42-208ENST00000578681 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
DDX42-208ENST00000578681 TNXBP22105 4242 aa7.99□□□□□ -1.13
DDX42-208ENST00000578681 HERC2O95714 4834 aa7.98□□□□□ -1.13
DDX42-208ENST00000578681 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
DDX42-208ENST00000578681 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
DDX42-208ENST00000578681 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
DDX42-208ENST00000578681 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
DDX42-208ENST00000578681 MUC2Q02817 5179 aa7.64□□□□□ -1.19
DDX42-208ENST00000578681 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
DDX42-208ENST00000578681 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
DDX42-208ENST00000578681 HERC1Q15751 4861 aa7.56□□□□□ -1.2
DDX42-208ENST00000578681 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
DDX42-208ENST00000578681 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
DDX42-208ENST00000578681 TNP1P09430 55 aa7.47□□□□□ -1.21
DDX42-208ENST00000578681 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
DDX42-208ENST00000578681 PCLOQ9Y6V0 5065 aa7.35□□□□□ -1.23
DDX42-208ENST00000578681 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
DDX42-208ENST00000578681 UBR4Q5T4S7 5183 aa7.23□□□□□ -1.25
DDX42-208ENST00000578681 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.26
DDX42-208ENST00000578681 MUC17Q685J3 4493 aa7.2□□□□□ -1.26
DDX42-208ENST00000578681 MT1HP80294 61 aa7.2□□□□□ -1.26
DDX42-208ENST00000578681 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.26
DDX42-208ENST00000578681 INE1O15225 51 aa7.14□□□□□ -1.27
DDX42-208ENST00000578681 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
DDX42-208ENST00000578681 FLGP20930 4061 aaPredicted RBP7.09□□□□□ -1.27
DDX42-208ENST00000578681 MT2AP02795 61 aa7.06□□□□□ -1.28
DDX42-208ENST00000578681 MT1FP04733 61 aa7.06□□□□□ -1.28
DDX42-208ENST00000578681 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
DDX42-208ENST00000578681 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
DDX42-208ENST00000578681 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
DDX42-208ENST00000578681 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.32
DDX42-208ENST00000578681 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
DDX42-208ENST00000578681 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
DDX42-208ENST00000578681 MT1BP07438 61 aa6.63□□□□□ -1.35
DDX42-208ENST00000578681 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
DDX42-208ENST00000578681 KRTAP19-8Q3LI54 63 aa6.59□□□□□ -1.35
DDX42-208ENST00000578681 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
DDX42-208ENST00000578681 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
DDX42-208ENST00000578681 MT1XP80297 61 aa6.55□□□□□ -1.36
DDX42-208ENST00000578681 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
DDX42-208ENST00000578681 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
DDX42-208ENST00000578681 USH2AO75445 5202 aa6.51□□□□□ -1.37
DDX42-208ENST00000578681 LCE2BO14633 110 aa6.43□□□□□ -1.38
DDX42-208ENST00000578681 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
DDX42-208ENST00000578681 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
DDX42-208ENST00000578681 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
DDX42-208ENST00000578681 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
DDX42-208ENST00000578681 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
DDX42-208ENST00000578681 KMT2DO14686 5537 aa6.25□□□□□ -1.41
DDX42-208ENST00000578681 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
DDX42-208ENST00000578681 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
DDX42-208ENST00000578681 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
DDX42-208ENST00000578681 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.45
DDX42-208ENST00000578681 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
DDX42-208ENST00000578681 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
DDX42-208ENST00000578681 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
DDX42-208ENST00000578681 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
DDX42-208ENST00000578681 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
DDX42-208ENST00000578681 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
DDX42-208ENST00000578681 MT1EP04732 61 aa5.72□□□□□ -1.49
DDX42-208ENST00000578681 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.49
DDX42-208ENST00000578681 MT1LQ93083 61 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms