RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
CUEDC1-208ENST00000578357 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
CUEDC1-208ENST00000578357 A0A087WVE0 104 aa4.49□□□□□ -1.69
CUEDC1-208ENST00000578357 C1orf64Q8NEQ6 169 aa4.49□□□□□ -1.69
CUEDC1-208ENST00000578357 MT-ATP8P03928 68 aa4.48□□□□□ -1.69
CUEDC1-208ENST00000578357 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
CUEDC1-208ENST00000578357 LCA10Q71F78 164 aa4.48□□□□□ -1.69
CUEDC1-208ENST00000578357 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
CUEDC1-208ENST00000578357 S4R3F8 94 aa4.47□□□□□ -1.69
CUEDC1-208ENST00000578357 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
CUEDC1-208ENST00000578357 TP53AIP1Q9HCN2 124 aa4.45□□□□□ -1.7
CUEDC1-208ENST00000578357 HIST1H4AP62805 103 aaKnown RBP4.44□□□□□ -1.7
CUEDC1-208ENST00000578357 CSAG1Q6PB30 78 aa4.44□□□□□ -1.7
CUEDC1-208ENST00000578357 TRAV22A0A0B4J277 110 aa4.43□□□□□ -1.7
CUEDC1-208ENST00000578357 ACYP1P07311 99 aa4.43□□□□□ -1.7
CUEDC1-208ENST00000578357 CYP4F30PQ9H0H9 118 aa4.43□□□□□ -1.7
CUEDC1-208ENST00000578357 IMUPQ9GZP8 106 aa4.41□□□□□ -1.7
CUEDC1-208ENST00000578357 ANAPC13Q9BS18 74 aa4.4□□□□□ -1.71
CUEDC1-208ENST00000578357 H0Y9P7 68 aa4.39□□□□□ -1.71
CUEDC1-208ENST00000578357 ATP5EP2Q5VTU8 51 aa4.39□□□□□ -1.71
CUEDC1-208ENST00000578357 KLKP1Q107X0 134 aa4.38□□□□□ -1.71
CUEDC1-208ENST00000578357 LOC101927531A0A1B0GV80 90 aa4.37□□□□□ -1.71
CUEDC1-208ENST00000578357 SPRR2EP22531 72 aa4.35□□□□□ -1.71
CUEDC1-208ENST00000578357 SPRR2BP35325 72 aa4.35□□□□□ -1.71
CUEDC1-208ENST00000578357 SPRR2AP35326 72 aa4.35□□□□□ -1.71
CUEDC1-208ENST00000578357 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
CUEDC1-208ENST00000578357 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.71
CUEDC1-208ENST00000578357 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
CUEDC1-208ENST00000578357 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
CUEDC1-208ENST00000578357 UQCRQO14949 82 aa4.33□□□□□ -1.72
CUEDC1-208ENST00000578357 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
CUEDC1-208ENST00000578357 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
CUEDC1-208ENST00000578357 CCDC179H3BU77 68 aa4.32□□□□□ -1.72
CUEDC1-208ENST00000578357 LINC00208Q96KT6 92 aa4.31□□□□□ -1.72
CUEDC1-208ENST00000578357 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
CUEDC1-208ENST00000578357 ATOX1O00244 68 aa4.28□□□□□ -1.72
CUEDC1-208ENST00000578357 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
CUEDC1-208ENST00000578357 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
CUEDC1-208ENST00000578357 COX7CP15954 63 aa4.24□□□□□ -1.73
CUEDC1-208ENST00000578357 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
CUEDC1-208ENST00000578357 NDUFC1O43677 76 aa4.23□□□□□ -1.73
CUEDC1-208ENST00000578357 ADM2Q7Z4H4 148 aa4.23□□□□□ -1.73
CUEDC1-208ENST00000578357 SPRR2DP22532 72 aa4.21□□□□□ -1.74
CUEDC1-208ENST00000578357 MP68P56378 58 aa4.21□□□□□ -1.74
CUEDC1-208ENST00000578357 SMIM20Q8N5G0 67 aa4.2□□□□□ -1.74
CUEDC1-208ENST00000578357 A8MUN3 132 aa4.19□□□□□ -1.74
CUEDC1-208ENST00000578357 SERP2Q8N6R1 65 aa4.19□□□□□ -1.74
CUEDC1-208ENST00000578357 H0YAA0 97 aa4.18□□□□□ -1.74
CUEDC1-208ENST00000578357 P0C880 135 aa4.18□□□□□ -1.74
CUEDC1-208ENST00000578357 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
CUEDC1-208ENST00000578357 MT1XP80297 61 aa4.17□□□□□ -1.74
CUEDC1-208ENST00000578357 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
CUEDC1-208ENST00000578357 TMEM258P61165 79 aa4.16□□□□□ -1.74
CUEDC1-208ENST00000578357 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
CUEDC1-208ENST00000578357 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
CUEDC1-208ENST00000578357 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.75
CUEDC1-208ENST00000578357 H3BPC8 53 aa4.14□□□□□ -1.75
CUEDC1-208ENST00000578357 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
CUEDC1-208ENST00000578357 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
CUEDC1-208ENST00000578357 TRAV7A0A075B6U4 112 aa4.11□□□□□ -1.75
CUEDC1-208ENST00000578357 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
CUEDC1-208ENST00000578357 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
CUEDC1-208ENST00000578357 M0QZ58 72 aa4.08□□□□□ -1.76
CUEDC1-208ENST00000578357 SNURFQ9Y675 71 aa4.07□□□□□ -1.76
CUEDC1-208ENST00000578357 R4GN34 69 aa4.07□□□□□ -1.76
CUEDC1-208ENST00000578357 H7BZZ5 65 aa4.06□□□□□ -1.76
CUEDC1-208ENST00000578357 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
CUEDC1-208ENST00000578357 C20orf197Q8N268 126 aa4.06□□□□□ -1.76
CUEDC1-208ENST00000578357 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
CUEDC1-208ENST00000578357 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
CUEDC1-208ENST00000578357 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.76
CUEDC1-208ENST00000578357 ACYP2P14621 99 aa3.99□□□□□ -1.77
CUEDC1-208ENST00000578357 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
CUEDC1-208ENST00000578357 SMIM26A0A096LP01 95 aa3.97□□□□□ -1.77
CUEDC1-208ENST00000578357 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
CUEDC1-208ENST00000578357 CHKB-CPT1BH3BT56 60 aa3.95□□□□□ -1.78
CUEDC1-208ENST00000578357 KRTAP13-4Q3LI77 160 aa3.94□□□□□ -1.78
CUEDC1-208ENST00000578357 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
CUEDC1-208ENST00000578357 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
CUEDC1-208ENST00000578357 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
CUEDC1-208ENST00000578357 SPANXA2-OT1Q8N9U9 137 aa3.89□□□□□ -1.79
CUEDC1-208ENST00000578357 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
CUEDC1-208ENST00000578357 COA5Q86WW8 74 aa3.86□□□□□ -1.79
CUEDC1-208ENST00000578357 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
CUEDC1-208ENST00000578357 Q1T7F1 81 aa3.83□□□□□ -1.8
CUEDC1-208ENST00000578357 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
CUEDC1-208ENST00000578357 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
CUEDC1-208ENST00000578357 A0A0D9SG42 100 aa3.79□□□□□ -1.8
CUEDC1-208ENST00000578357 SPATA8Q6RVD6 105 aa3.79□□□□□ -1.8
CUEDC1-208ENST00000578357 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
CUEDC1-208ENST00000578357 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
CUEDC1-208ENST00000578357 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
CUEDC1-208ENST00000578357 V9GYY9 64 aa3.77□□□□□ -1.81
CUEDC1-208ENST00000578357 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
CUEDC1-208ENST00000578357 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
CUEDC1-208ENST00000578357 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
CUEDC1-208ENST00000578357 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
CUEDC1-208ENST00000578357 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
CUEDC1-208ENST00000578357 MT1EP04732 61 aa3.72□□□□□ -1.81
CUEDC1-208ENST00000578357 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms