RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 H0YAA0 97 aa3.76□□□□□ -1.81
SMG6-218ENST00000575454 MT1XP80297 61 aa3.76□□□□□ -1.81
SMG6-218ENST00000575454 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
SMG6-218ENST00000575454 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
SMG6-218ENST00000575454 TP53AIP1Q9HCN2 124 aa3.75□□□□□ -1.81
SMG6-218ENST00000575454 A8MUN3 132 aa3.74□□□□□ -1.81
SMG6-218ENST00000575454 M0R143 59 aa3.74□□□□□ -1.81
SMG6-218ENST00000575454 NAA38Q9BRA0 125 aaKnown RBP3.74□□□□□ -1.81
SMG6-218ENST00000575454 TSTD3H0UI37 97 aa3.72□□□□□ -1.81
SMG6-218ENST00000575454 H3BT86 120 aa3.72□□□□□ -1.81
SMG6-218ENST00000575454 NDUFC1O43677 76 aa3.71□□□□□ -1.82
SMG6-218ENST00000575454 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
SMG6-218ENST00000575454 CYP4F30PQ9H0H9 118 aa3.69□□□□□ -1.82
SMG6-218ENST00000575454 ADM2Q7Z4H4 148 aa3.68□□□□□ -1.82
SMG6-218ENST00000575454 UBL5Q9BZL1 73 aa3.68□□□□□ -1.82
SMG6-218ENST00000575454 A0A087WVE0 104 aa3.67□□□□□ -1.82
SMG6-218ENST00000575454 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
SMG6-218ENST00000575454 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
SMG6-218ENST00000575454 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
SMG6-218ENST00000575454 R4GN34 69 aa3.64□□□□□ -1.83
SMG6-218ENST00000575454 LOC101927531A0A1B0GV80 90 aa3.63□□□□□ -1.83
SMG6-218ENST00000575454 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
SMG6-218ENST00000575454 C20orf197Q8N268 126 aa3.62□□□□□ -1.83
SMG6-218ENST00000575454 TRAV22A0A0B4J277 110 aa3.61□□□□□ -1.83
SMG6-218ENST00000575454 ACYP1P07311 99 aa3.61□□□□□ -1.83
SMG6-218ENST00000575454 PCP4P48539 62 aa3.59□□□□□ -1.83
SMG6-218ENST00000575454 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
SMG6-218ENST00000575454 A0A1W2PPM0 123 aa3.58□□□□□ -1.84
SMG6-218ENST00000575454 C9orf118A6NHY6 69 aa3.58□□□□□ -1.84
SMG6-218ENST00000575454 K7EP34 96 aa3.57□□□□□ -1.84
SMG6-218ENST00000575454 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
SMG6-218ENST00000575454 M0QZ58 72 aa3.56□□□□□ -1.84
SMG6-218ENST00000575454 BATFQ16520 125 aa3.56□□□□□ -1.84
SMG6-218ENST00000575454 LOC105371267A0A1B0GV96 52 aa3.55□□□□□ -1.84
SMG6-218ENST00000575454 ATOX1O00244 68 aa3.54□□□□□ -1.84
SMG6-218ENST00000575454 LINC01554Q52M75 96 aa3.53□□□□□ -1.84
SMG6-218ENST00000575454 SPCS1Q9Y6A9 102 aa3.53□□□□□ -1.84
SMG6-218ENST00000575454 P0C880 135 aa3.52□□□□□ -1.85
SMG6-218ENST00000575454 TAX1BP3O14907 124 aa3.51□□□□□ -1.85
SMG6-218ENST00000575454 UQCRQO14949 82 aa3.51□□□□□ -1.85
SMG6-218ENST00000575454 H0Y9P7 68 aa3.48□□□□□ -1.85
SMG6-218ENST00000575454 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
SMG6-218ENST00000575454 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
SMG6-218ENST00000575454 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
SMG6-218ENST00000575454 SMIM6P0DI80 62 aa3.44□□□□□ -1.86
SMG6-218ENST00000575454 PRO0461Q9UI25 63 aa3.44□□□□□ -1.86
SMG6-218ENST00000575454 MT-ATP8P03928 68 aa3.43□□□□□ -1.86
SMG6-218ENST00000575454 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
SMG6-218ENST00000575454 LINC00208Q96KT6 92 aa3.41□□□□□ -1.86
SMG6-218ENST00000575454 PCP4L1A6NKN8 68 aa3.39□□□□□ -1.87
SMG6-218ENST00000575454 MP68P56378 58 aa3.39□□□□□ -1.87
SMG6-218ENST00000575454 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
SMG6-218ENST00000575454 HIST1H4AP62805 103 aaKnown RBP3.38□□□□□ -1.87
SMG6-218ENST00000575454 ATP5EP2Q5VTU8 51 aa3.38□□□□□ -1.87
SMG6-218ENST00000575454 MT4P47944 62 aa3.37□□□□□ -1.87
SMG6-218ENST00000575454 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
SMG6-218ENST00000575454 MT1EP04732 61 aa3.36□□□□□ -1.87
SMG6-218ENST00000575454 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
SMG6-218ENST00000575454 CYSTM1Q9H1C7 97 aa3.36□□□□□ -1.87
SMG6-218ENST00000575454 F8W1H4 67 aa3.35□□□□□ -1.87
SMG6-218ENST00000575454 DMAC1Q96GE9 116 aa3.35□□□□□ -1.87
SMG6-218ENST00000575454 ETDBQ3ZM63 59 aa3.33□□□□□ -1.88
SMG6-218ENST00000575454 COL5A1-AS1Q5SY13 56 aa3.33□□□□□ -1.88
SMG6-218ENST00000575454 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
SMG6-218ENST00000575454 GTF2H5Q6ZYL4 71 aa3.32□□□□□ -1.88
SMG6-218ENST00000575454 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
SMG6-218ENST00000575454 MT1GP13640 62 aa3.31□□□□□ -1.88
SMG6-218ENST00000575454 SEC61GP60059 68 aa3.31□□□□□ -1.88
SMG6-218ENST00000575454 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
SMG6-218ENST00000575454 TRAV7A0A075B6U4 112 aa3.3□□□□□ -1.88
SMG6-218ENST00000575454 H3BPC8 53 aa3.3□□□□□ -1.88
SMG6-218ENST00000575454 SPTSSBQ8NFR3 76 aa3.3□□□□□ -1.88
SMG6-218ENST00000575454 FAM240AA0A1B0GVK7 77 aa3.28□□□□□ -1.88
SMG6-218ENST00000575454 H3BS24 57 aa3.28□□□□□ -1.88
SMG6-218ENST00000575454 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
SMG6-218ENST00000575454 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
SMG6-218ENST00000575454 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
SMG6-218ENST00000575454 ACYP2P14621 99 aa3.25□□□□□ -1.89
SMG6-218ENST00000575454 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
SMG6-218ENST00000575454 LINC00643Q86TS7 51 aa3.23□□□□□ -1.89
SMG6-218ENST00000575454 KRTAP4-6Q9BYQ5 205 aa3.23□□□□□ -1.89
SMG6-218ENST00000575454 SCGB1A1P11684 91 aa3.21□□□□□ -1.9
SMG6-218ENST00000575454 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
SMG6-218ENST00000575454 MT1MQ8N339 61 aa3.21□□□□□ -1.9
SMG6-218ENST00000575454 A0A0D9SG42 100 aa3.2□□□□□ -1.9
SMG6-218ENST00000575454 A0A1B0GV90 55 aa3.2□□□□□ -1.9
SMG6-218ENST00000575454 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
SMG6-218ENST00000575454 MT1LQ93083 61 aa3.16□□□□□ -1.9
SMG6-218ENST00000575454 V9GYY9 64 aa3.16□□□□□ -1.9
SMG6-218ENST00000575454 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
SMG6-218ENST00000575454 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
SMG6-218ENST00000575454 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
SMG6-218ENST00000575454 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
SMG6-218ENST00000575454 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
SMG6-218ENST00000575454 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
SMG6-218ENST00000575454 K7ERU9 68 aa3.05□□□□□ -1.92
SMG6-218ENST00000575454 SMIM20Q8N5G0 67 aa3.05□□□□□ -1.92
SMG6-218ENST00000575454 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
SMG6-218ENST00000575454 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
SMG6-218ENST00000575454 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms