RNA–Protein interactions for RNA: ENST00000573674.1

SLC52A1-204, Transcript of solute carrier family 52 member 1, humanhuman

TSL 2

Gene SLC52A1, Length 2,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-204ENST00000573674 COX6B2Q6YFQ2 88 aa7.87□□□□□ -1.15
SLC52A1-204ENST00000573674 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
SLC52A1-204ENST00000573674 RPS29P62273 56 aaKnown RBP7.84□□□□□ -1.15
SLC52A1-204ENST00000573674 PKHD1L1Q86WI1 4243 aa7.78□□□□□ -1.16
SLC52A1-204ENST00000573674 C9orf92A6NGG3 77 aa7.77□□□□□ -1.17
SLC52A1-204ENST00000573674 SPINT4Q6UDR6 99 aa7.77□□□□□ -1.17
SLC52A1-204ENST00000573674 NDUFAF8A1L188 74 aa7.74□□□□□ -1.17
SLC52A1-204ENST00000573674 HSPG2P98160 4391 aa7.74□□□□□ -1.17
SLC52A1-204ENST00000573674 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
SLC52A1-204ENST00000573674 LRP1Q07954 4544 aaKnown RBP7.73□□□□□ -1.17
SLC52A1-204ENST00000573674 TPRXLQ17RH7 258 aa7.72□□□□□ -1.17
SLC52A1-204ENST00000573674 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
SLC52A1-204ENST00000573674 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.17
SLC52A1-204ENST00000573674 KRTAP10-6P60371 365 aaPredicted RBP7.68□□□□□ -1.18
SLC52A1-204ENST00000573674 RYR1P21817 5038 aa7.67□□□□□ -1.18
SLC52A1-204ENST00000573674 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
SLC52A1-204ENST00000573674 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
SLC52A1-204ENST00000573674 KIAA1109Q2LD37 5005 aa7.65□□□□□ -1.19
SLC52A1-204ENST00000573674 KRTAP17-1Q9BYP8 105 aa7.64□□□□□ -1.19
SLC52A1-204ENST00000573674 Q5VSD8 79 aa7.64□□□□□ -1.19
SLC52A1-204ENST00000573674 TNXBP22105 4242 aa7.63□□□□□ -1.19
SLC52A1-204ENST00000573674 A0A0A0MQY5 61 aa7.62□□□□□ -1.19
SLC52A1-204ENST00000573674 A0A0D9SG42 100 aa7.61□□□□□ -1.19
SLC52A1-204ENST00000573674 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
SLC52A1-204ENST00000573674 EPPK1P58107 5090 aaKnown RBP7.59□□□□□ -1.19
SLC52A1-204ENST00000573674 FAT3Q8TDW7 4589 aa7.58□□□□□ -1.2
SLC52A1-204ENST00000573674 MYCBP2O75592 4640 aa7.56□□□□□ -1.2
SLC52A1-204ENST00000573674 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
SLC52A1-204ENST00000573674 DMBT1Q9UGM3 2413 aaPredicted RBP7.52□□□□□ -1.21
SLC52A1-204ENST00000573674 S4R3F8 94 aa7.5□□□□□ -1.21
SLC52A1-204ENST00000573674 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
SLC52A1-204ENST00000573674 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
SLC52A1-204ENST00000573674 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
SLC52A1-204ENST00000573674 XP32Q5T750 250 aa7.36□□□□□ -1.23
SLC52A1-204ENST00000573674 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
SLC52A1-204ENST00000573674 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
SLC52A1-204ENST00000573674 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
SLC52A1-204ENST00000573674 LPAP08519 4548 aa7.23□□□□□ -1.25
SLC52A1-204ENST00000573674 LRP2P98164 4655 aa7.22□□□□□ -1.25
SLC52A1-204ENST00000573674 M0QZ58 72 aa7.21□□□□□ -1.26
SLC52A1-204ENST00000573674 HERC2O95714 4834 aa7.12□□□□□ -1.27
SLC52A1-204ENST00000573674 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
SLC52A1-204ENST00000573674 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
SLC52A1-204ENST00000573674 J3QL48 77 aa7□□□□□ -1.29
SLC52A1-204ENST00000573674 R4GN34 69 aa6.91□□□□□ -1.3
SLC52A1-204ENST00000573674 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
SLC52A1-204ENST00000573674 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
SLC52A1-204ENST00000573674 MUC17Q685J3 4493 aa6.87□□□□□ -1.31
SLC52A1-204ENST00000573674 KRTAP4-1Q9BYQ7 146 aa6.85□□□□□ -1.31
SLC52A1-204ENST00000573674 HERC1Q15751 4861 aa6.84□□□□□ -1.31
SLC52A1-204ENST00000573674 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.32
SLC52A1-204ENST00000573674 MUC2Q02817 5179 aa6.8□□□□□ -1.32
SLC52A1-204ENST00000573674 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
SLC52A1-204ENST00000573674 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.32
SLC52A1-204ENST00000573674 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.34
SLC52A1-204ENST00000573674 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
SLC52A1-204ENST00000573674 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
SLC52A1-204ENST00000573674 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.35
SLC52A1-204ENST00000573674 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
SLC52A1-204ENST00000573674 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
SLC52A1-204ENST00000573674 LCE2BO14633 110 aa6.57□□□□□ -1.36
SLC52A1-204ENST00000573674 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
SLC52A1-204ENST00000573674 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
SLC52A1-204ENST00000573674 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
SLC52A1-204ENST00000573674 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
SLC52A1-204ENST00000573674 FAT4Q6V0I7 4981 aa6.49□□□□□ -1.37
SLC52A1-204ENST00000573674 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
SLC52A1-204ENST00000573674 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
SLC52A1-204ENST00000573674 UBR4Q5T4S7 5183 aa6.47□□□□□ -1.37
SLC52A1-204ENST00000573674 RNF213Q63HN8 5207 aa6.46□□□□□ -1.37
SLC52A1-204ENST00000573674 TNP1P09430 55 aa6.43□□□□□ -1.38
SLC52A1-204ENST00000573674 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
SLC52A1-204ENST00000573674 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
SLC52A1-204ENST00000573674 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
SLC52A1-204ENST00000573674 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
SLC52A1-204ENST00000573674 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
SLC52A1-204ENST00000573674 MT1HP80294 61 aa6.21□□□□□ -1.41
SLC52A1-204ENST00000573674 M0R2T5 61 aa6.2□□□□□ -1.42
SLC52A1-204ENST00000573674 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
SLC52A1-204ENST00000573674 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
SLC52A1-204ENST00000573674 INE1O15225 51 aa6.1□□□□□ -1.43
SLC52A1-204ENST00000573674 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
SLC52A1-204ENST00000573674 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
SLC52A1-204ENST00000573674 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
SLC52A1-204ENST00000573674 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
SLC52A1-204ENST00000573674 MT2AP02795 61 aa6.05□□□□□ -1.44
SLC52A1-204ENST00000573674 MT1FP04733 61 aa6.05□□□□□ -1.44
SLC52A1-204ENST00000573674 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
SLC52A1-204ENST00000573674 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
SLC52A1-204ENST00000573674 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
SLC52A1-204ENST00000573674 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
SLC52A1-204ENST00000573674 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
SLC52A1-204ENST00000573674 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
SLC52A1-204ENST00000573674 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
SLC52A1-204ENST00000573674 MT1BP07438 61 aa5.78□□□□□ -1.48
SLC52A1-204ENST00000573674 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
SLC52A1-204ENST00000573674 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
SLC52A1-204ENST00000573674 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
SLC52A1-204ENST00000573674 MT1XP80297 61 aa5.67□□□□□ -1.5
SLC52A1-204ENST00000573674 USH2AO75445 5202 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms