RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 LOC105371267A0A1B0GV96 52 aa8.3□□□□□ -1.08
CCDC40-206ENST00000572083 M0R143 59 aa8.3□□□□□ -1.08
CCDC40-206ENST00000572083 H3BT86 120 aa8.25□□□□□ -1.09
CCDC40-206ENST00000572083 TSTD3H0UI37 97 aa8.24□□□□□ -1.09
CCDC40-206ENST00000572083 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
CCDC40-206ENST00000572083 A8MUN3 132 aa8.21□□□□□ -1.1
CCDC40-206ENST00000572083 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
CCDC40-206ENST00000572083 LCE3BQ5TA77 95 aa8.2□□□□□ -1.1
CCDC40-206ENST00000572083 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
CCDC40-206ENST00000572083 H0YAA0 97 aa8.17□□□□□ -1.1
CCDC40-206ENST00000572083 PLAC4Q8WY50 150 aa8.17□□□□□ -1.1
CCDC40-206ENST00000572083 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
CCDC40-206ENST00000572083 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
CCDC40-206ENST00000572083 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
CCDC40-206ENST00000572083 UBL5Q9BZL1 73 aa8.11□□□□□ -1.11
CCDC40-206ENST00000572083 NDUFC1O43677 76 aa8.1□□□□□ -1.11
CCDC40-206ENST00000572083 K7EP34 96 aa8.09□□□□□ -1.11
CCDC40-206ENST00000572083 BATFQ16520 125 aa8.08□□□□□ -1.12
CCDC40-206ENST00000572083 GPR98Q8WXG9 6306 aa8.08□□□□□ -1.12
CCDC40-206ENST00000572083 A0A1W2PPM0 123 aa8.03□□□□□ -1.12
CCDC40-206ENST00000572083 C9orf118A6NHY6 69 aa8.02□□□□□ -1.13
CCDC40-206ENST00000572083 H3BS24 57 aa7.98□□□□□ -1.13
CCDC40-206ENST00000572083 PCP4P48539 62 aa7.98□□□□□ -1.13
CCDC40-206ENST00000572083 KRTAP10-7P60409 375 aaPredicted RBP7.98□□□□□ -1.13
CCDC40-206ENST00000572083 TRAV22A0A0B4J277 110 aa7.97□□□□□ -1.13
CCDC40-206ENST00000572083 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
CCDC40-206ENST00000572083 TAX1BP3O14907 124 aa7.96□□□□□ -1.14
CCDC40-206ENST00000572083 R4GN34 69 aa7.96□□□□□ -1.14
CCDC40-206ENST00000572083 DSTQ03001 7570 aaKnown RBP7.9□□□□□ -1.14
CCDC40-206ENST00000572083 SPCS1Q9Y6A9 102 aa7.9□□□□□ -1.14
CCDC40-206ENST00000572083 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
CCDC40-206ENST00000572083 M0QZ58 72 aa7.88□□□□□ -1.15
CCDC40-206ENST00000572083 ACYP1P07311 99 aa7.87□□□□□ -1.15
CCDC40-206ENST00000572083 P0C880 135 aa7.87□□□□□ -1.15
CCDC40-206ENST00000572083 SMIM6P0DI80 62 aa7.86□□□□□ -1.15
CCDC40-206ENST00000572083 LINC01554Q52M75 96 aa7.83□□□□□ -1.16
CCDC40-206ENST00000572083 KRTAP4-9Q9BYQ8 210 aa7.82□□□□□ -1.16
CCDC40-206ENST00000572083 PCP4L1A6NKN8 68 aa7.79□□□□□ -1.16
CCDC40-206ENST00000572083 PRO0461Q9UI25 63 aa7.78□□□□□ -1.16
CCDC40-206ENST00000572083 H0Y9P7 68 aa7.77□□□□□ -1.17
CCDC40-206ENST00000572083 C20orf197Q8N268 126 aa7.77□□□□□ -1.17
CCDC40-206ENST00000572083 ATOX1O00244 68 aa7.72□□□□□ -1.17
CCDC40-206ENST00000572083 UQCRQO14949 82 aa7.69□□□□□ -1.18
CCDC40-206ENST00000572083 LINC00208Q96KT6 92 aa7.59□□□□□ -1.19
CCDC40-206ENST00000572083 LCE5AQ5TCM9 118 aa7.58□□□□□ -1.2
CCDC40-206ENST00000572083 HIST1H4AP62805 103 aaKnown RBP7.55□□□□□ -1.2
CCDC40-206ENST00000572083 LCE1DQ5T752 114 aa7.55□□□□□ -1.2
CCDC40-206ENST00000572083 LOC100996750A0A140TA64 210 aa7.54□□□□□ -1.2
CCDC40-206ENST00000572083 KRTAP4-6Q9BYQ5 205 aa7.54□□□□□ -1.2
CCDC40-206ENST00000572083 ETDBQ3ZM63 59 aa7.52□□□□□ -1.21
CCDC40-206ENST00000572083 MT-ATP8P03928 68 aa7.51□□□□□ -1.21
CCDC40-206ENST00000572083 A0A1B0GV90 55 aa7.49□□□□□ -1.21
CCDC40-206ENST00000572083 KRTAP19-3Q7Z4W3 81 aa7.48□□□□□ -1.21
CCDC40-206ENST00000572083 KRTAP19-7Q3SYF9 63 aa7.46□□□□□ -1.22
CCDC40-206ENST00000572083 HMCN1Q96RW7 5635 aa7.46□□□□□ -1.22
CCDC40-206ENST00000572083 COL5A1-AS1Q5SY13 56 aa7.45□□□□□ -1.22
CCDC40-206ENST00000572083 MT1EP04732 61 aa7.44□□□□□ -1.22
CCDC40-206ENST00000572083 ATP5EP2Q5VTU8 51 aa7.44□□□□□ -1.22
CCDC40-206ENST00000572083 F8W1H4 67 aa7.42□□□□□ -1.22
CCDC40-206ENST00000572083 MP68P56378 58 aa7.42□□□□□ -1.22
CCDC40-206ENST00000572083 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
CCDC40-206ENST00000572083 MT4P47944 62 aa7.41□□□□□ -1.22
CCDC40-206ENST00000572083 AHNAK2Q8IVF2 5795 aa7.39□□□□□ -1.23
CCDC40-206ENST00000572083 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
CCDC40-206ENST00000572083 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
CCDC40-206ENST00000572083 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
CCDC40-206ENST00000572083 LCE4AQ5TA78 99 aa7.33□□□□□ -1.24
CCDC40-206ENST00000572083 SCGB1A1P11684 91 aa7.32□□□□□ -1.24
CCDC40-206ENST00000572083 KRTAP5-10Q6L8G5 202 aa7.29□□□□□ -1.24
CCDC40-206ENST00000572083 FAM240AA0A1B0GVK7 77 aa7.27□□□□□ -1.25
CCDC40-206ENST00000572083 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
CCDC40-206ENST00000572083 TRAV7A0A075B6U4 112 aa7.21□□□□□ -1.26
CCDC40-206ENST00000572083 MT1GP13640 62 aa7.2□□□□□ -1.26
CCDC40-206ENST00000572083 H3BPC8 53 aa7.19□□□□□ -1.26
CCDC40-206ENST00000572083 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
CCDC40-206ENST00000572083 LINC00643Q86TS7 51 aa7.15□□□□□ -1.26
CCDC40-206ENST00000572083 KRTAP19-5Q3LI72 72 aa7.14□□□□□ -1.27
CCDC40-206ENST00000572083 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
CCDC40-206ENST00000572083 MT1MQ8N339 61 aa7.12□□□□□ -1.27
CCDC40-206ENST00000572083 SPTSSBQ8NFR3 76 aa7.12□□□□□ -1.27
CCDC40-206ENST00000572083 ACYP2P14621 99 aa7.1□□□□□ -1.27
CCDC40-206ENST00000572083 KRTAP5-4Q6L8H1 288 aa7.1□□□□□ -1.27
CCDC40-206ENST00000572083 K7ERU9 68 aa7.08□□□□□ -1.28
CCDC40-206ENST00000572083 A0A0D9SG42 100 aa7.07□□□□□ -1.28
CCDC40-206ENST00000572083 KRTAP5-7Q6L8G8 165 aa7.06□□□□□ -1.28
CCDC40-206ENST00000572083 KRTAP4-3Q9BYR4 195 aa7.02□□□□□ -1.29
CCDC40-206ENST00000572083 MT1LQ93083 61 aa7.01□□□□□ -1.29
CCDC40-206ENST00000572083 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
CCDC40-206ENST00000572083 KRTAP5-3Q6L8H2 238 aa6.98□□□□□ -1.29
CCDC40-206ENST00000572083 KRTAP4-12Q9BQ66 201 aa6.98□□□□□ -1.29
CCDC40-206ENST00000572083 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
CCDC40-206ENST00000572083 SEC61GP60059 68 aa6.92□□□□□ -1.3
CCDC40-206ENST00000572083 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
CCDC40-206ENST00000572083 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
CCDC40-206ENST00000572083 KRTAP20-2Q3LI61 65 aa6.77□□□□□ -1.33
CCDC40-206ENST00000572083 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
CCDC40-206ENST00000572083 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
CCDC40-206ENST00000572083 J3QR89 54 aa6.74□□□□□ -1.33
CCDC40-206ENST00000572083 V9GYY9 64 aa6.73□□□□□ -1.33
CCDC40-206ENST00000572083 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms