RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 S4R3F8 94 aa5.27□□□□□ -1.57
USP43-203ENST00000570827 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
USP43-203ENST00000570827 KMT2CQ8NEZ4 4911 aaKnown RBP5.22□□□□□ -1.57
USP43-203ENST00000570827 DYNC1H1Q14204 4646 aaKnown RBP5.22□□□□□ -1.57
USP43-203ENST00000570827 PKD1P98161 4303 aa5.21□□□□□ -1.58
USP43-203ENST00000570827 P0C880 135 aa5.18□□□□□ -1.58
USP43-203ENST00000570827 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
USP43-203ENST00000570827 RPS29P62273 56 aaKnown RBP5.17□□□□□ -1.58
USP43-203ENST00000570827 APOBP04114 4563 aaKnown RBP5.15□□□□□ -1.59
USP43-203ENST00000570827 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
USP43-203ENST00000570827 SACSQ9NZJ4 4579 aa5.13□□□□□ -1.59
USP43-203ENST00000570827 TPRXLQ17RH7 258 aa5.12□□□□□ -1.59
USP43-203ENST00000570827 KRTAP21-3Q3LHN1 58 aa5.11□□□□□ -1.59
USP43-203ENST00000570827 R4GN34 69 aa5.11□□□□□ -1.59
USP43-203ENST00000570827 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
USP43-203ENST00000570827 M0QZ58 72 aa5.1□□□□□ -1.59
USP43-203ENST00000570827 RYR1P21817 5038 aa5.09□□□□□ -1.59
USP43-203ENST00000570827 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
USP43-203ENST00000570827 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
USP43-203ENST00000570827 KRTAP10-6P60371 365 aaPredicted RBP5.06□□□□□ -1.6
USP43-203ENST00000570827 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
USP43-203ENST00000570827 A0A1B0GVY2 172 aa5.05□□□□□ -1.6
USP43-203ENST00000570827 RYR3Q15413 4870 aa5.05□□□□□ -1.6
USP43-203ENST00000570827 XP32Q5T750 250 aa5.04□□□□□ -1.6
USP43-203ENST00000570827 LRP2P98164 4655 aa4.99□□□□□ -1.61
USP43-203ENST00000570827 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
USP43-203ENST00000570827 KRTAP10-4P60372 401 aaPredicted RBP4.98□□□□□ -1.61
USP43-203ENST00000570827 RYR2Q92736 4967 aa4.98□□□□□ -1.61
USP43-203ENST00000570827 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.61
USP43-203ENST00000570827 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
USP43-203ENST00000570827 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
USP43-203ENST00000570827 HSPG2P98160 4391 aa4.94□□□□□ -1.62
USP43-203ENST00000570827 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
USP43-203ENST00000570827 LPAP08519 4548 aa4.91□□□□□ -1.62
USP43-203ENST00000570827 MUC2Q02817 5179 aa4.9□□□□□ -1.62
USP43-203ENST00000570827 KRTAP17-1Q9BYP8 105 aa4.9□□□□□ -1.62
USP43-203ENST00000570827 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
USP43-203ENST00000570827 PKHD1L1Q86WI1 4243 aa4.85□□□□□ -1.63
USP43-203ENST00000570827 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.64
USP43-203ENST00000570827 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
USP43-203ENST00000570827 M0R2T5 61 aa4.78□□□□□ -1.64
USP43-203ENST00000570827 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
USP43-203ENST00000570827 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
USP43-203ENST00000570827 TNXBP22105 4242 aa4.74□□□□□ -1.65
USP43-203ENST00000570827 HERC2O95714 4834 aa4.7□□□□□ -1.66
USP43-203ENST00000570827 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
USP43-203ENST00000570827 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
USP43-203ENST00000570827 HERC1Q15751 4861 aa4.64□□□□□ -1.67
USP43-203ENST00000570827 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
USP43-203ENST00000570827 TNP1P09430 55 aa4.63□□□□□ -1.67
USP43-203ENST00000570827 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
USP43-203ENST00000570827 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
USP43-203ENST00000570827 PCLOQ9Y6V0 5065 aa4.55□□□□□ -1.68
USP43-203ENST00000570827 UBR4Q5T4S7 5183 aa4.48□□□□□ -1.69
USP43-203ENST00000570827 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
USP43-203ENST00000570827 KRTAP10-10P60014 251 aa4.4□□□□□ -1.71
USP43-203ENST00000570827 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
USP43-203ENST00000570827 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
USP43-203ENST00000570827 BIRC6Q9NR09 4857 aa4.27□□□□□ -1.73
USP43-203ENST00000570827 USH2AO75445 5202 aa4.22□□□□□ -1.73
USP43-203ENST00000570827 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
USP43-203ENST00000570827 KRTAP19-2Q3LHN2 52 aa4.17□□□□□ -1.74
USP43-203ENST00000570827 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
USP43-203ENST00000570827 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
USP43-203ENST00000570827 KMT2DO14686 5537 aa4.09□□□□□ -1.75
USP43-203ENST00000570827 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
USP43-203ENST00000570827 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
USP43-203ENST00000570827 MT1FP04733 61 aa4.04□□□□□ -1.76
USP43-203ENST00000570827 MT1HP80294 61 aa4.04□□□□□ -1.76
USP43-203ENST00000570827 LCE2CQ5TA81 110 aa4.02□□□□□ -1.77
USP43-203ENST00000570827 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
USP43-203ENST00000570827 KRTAP10-12P60413 245 aa4□□□□□ -1.77
USP43-203ENST00000570827 MT2AP02795 61 aa4□□□□□ -1.77
USP43-203ENST00000570827 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
USP43-203ENST00000570827 INE1O15225 51 aa3.98□□□□□ -1.77
USP43-203ENST00000570827 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.77
USP43-203ENST00000570827 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
USP43-203ENST00000570827 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
USP43-203ENST00000570827 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
USP43-203ENST00000570827 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
USP43-203ENST00000570827 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.8
USP43-203ENST00000570827 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
USP43-203ENST00000570827 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
USP43-203ENST00000570827 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
USP43-203ENST00000570827 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
USP43-203ENST00000570827 MT1XP80297 61 aa3.79□□□□□ -1.8
USP43-203ENST00000570827 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
USP43-203ENST00000570827 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
USP43-203ENST00000570827 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
USP43-203ENST00000570827 MT1BP07438 61 aa3.76□□□□□ -1.81
USP43-203ENST00000570827 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
USP43-203ENST00000570827 KRTAP19-8Q3LI54 63 aa3.74□□□□□ -1.81
USP43-203ENST00000570827 LCE2BO14633 110 aa3.69□□□□□ -1.82
USP43-203ENST00000570827 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
USP43-203ENST00000570827 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
USP43-203ENST00000570827 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
USP43-203ENST00000570827 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.82
USP43-203ENST00000570827 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
USP43-203ENST00000570827 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
USP43-203ENST00000570827 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms