RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
SMG6-207ENST00000570756 P0C880 135 aa8.11□□□□□ -1.11
SMG6-207ENST00000570756 HSPG2P98160 4391 aa8.09□□□□□ -1.11
SMG6-207ENST00000570756 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
SMG6-207ENST00000570756 SPINT4Q6UDR6 99 aa8.03□□□□□ -1.12
SMG6-207ENST00000570756 RYR1P21817 5038 aa8.02□□□□□ -1.13
SMG6-207ENST00000570756 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
SMG6-207ENST00000570756 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
SMG6-207ENST00000570756 A0A0D9SG42 100 aa7.99□□□□□ -1.13
SMG6-207ENST00000570756 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
SMG6-207ENST00000570756 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
SMG6-207ENST00000570756 PKHD1L1Q86WI1 4243 aa7.95□□□□□ -1.14
SMG6-207ENST00000570756 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
SMG6-207ENST00000570756 BIRC6Q9NR09 4857 aa7.93□□□□□ -1.14
SMG6-207ENST00000570756 KRTAP3-2Q9BYR7 98 aa7.92□□□□□ -1.14
SMG6-207ENST00000570756 S4R3F8 94 aa7.88□□□□□ -1.15
SMG6-207ENST00000570756 MYCBP2O75592 4640 aa7.88□□□□□ -1.15
SMG6-207ENST00000570756 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
SMG6-207ENST00000570756 DMBT1Q9UGM3 2413 aaPredicted RBP7.85□□□□□ -1.15
SMG6-207ENST00000570756 LRP1Q07954 4544 aaKnown RBP7.85□□□□□ -1.15
SMG6-207ENST00000570756 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
SMG6-207ENST00000570756 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
SMG6-207ENST00000570756 Q5VSD8 79 aa7.83□□□□□ -1.16
SMG6-207ENST00000570756 KRTAP4-5Q9BYR2 181 aa7.82□□□□□ -1.16
SMG6-207ENST00000570756 ABCA13Q86UQ4 5058 aa7.8□□□□□ -1.16
SMG6-207ENST00000570756 HERC2O95714 4834 aa7.79□□□□□ -1.16
SMG6-207ENST00000570756 NDUFAF8A1L188 74 aa7.79□□□□□ -1.16
SMG6-207ENST00000570756 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
SMG6-207ENST00000570756 KRTAP10-8P60410 259 aa7.71□□□□□ -1.17
SMG6-207ENST00000570756 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
SMG6-207ENST00000570756 FAT3Q8TDW7 4589 aa7.69□□□□□ -1.18
SMG6-207ENST00000570756 PCLOQ9Y6V0 5065 aa7.69□□□□□ -1.18
SMG6-207ENST00000570756 XP32Q5T750 250 aa7.67□□□□□ -1.18
SMG6-207ENST00000570756 TNXBP22105 4242 aa7.65□□□□□ -1.18
SMG6-207ENST00000570756 M0QZ58 72 aa7.63□□□□□ -1.19
SMG6-207ENST00000570756 HERC1Q15751 4861 aa7.49□□□□□ -1.21
SMG6-207ENST00000570756 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
SMG6-207ENST00000570756 J3QL48 77 aa7.39□□□□□ -1.23
SMG6-207ENST00000570756 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
SMG6-207ENST00000570756 R4GN34 69 aa7.35□□□□□ -1.23
SMG6-207ENST00000570756 LPAP08519 4548 aa7.32□□□□□ -1.24
SMG6-207ENST00000570756 LRP2P98164 4655 aa7.22□□□□□ -1.25
SMG6-207ENST00000570756 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
SMG6-207ENST00000570756 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
SMG6-207ENST00000570756 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
SMG6-207ENST00000570756 A0A0A0MQY5 61 aa7.11□□□□□ -1.27
SMG6-207ENST00000570756 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
SMG6-207ENST00000570756 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
SMG6-207ENST00000570756 CAMK2N1Q7Z7J9 78 aa7.03□□□□□ -1.28
SMG6-207ENST00000570756 MUC2Q02817 5179 aa7.03□□□□□ -1.28
SMG6-207ENST00000570756 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
SMG6-207ENST00000570756 RNF213Q63HN8 5207 aa6.96□□□□□ -1.29
SMG6-207ENST00000570756 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
SMG6-207ENST00000570756 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
SMG6-207ENST00000570756 TNP1P09430 55 aa6.82□□□□□ -1.32
SMG6-207ENST00000570756 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
SMG6-207ENST00000570756 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
SMG6-207ENST00000570756 KRTAP19-2Q3LHN2 52 aa6.72□□□□□ -1.33
SMG6-207ENST00000570756 FAT4Q6V0I7 4981 aa6.7□□□□□ -1.34
SMG6-207ENST00000570756 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
SMG6-207ENST00000570756 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
SMG6-207ENST00000570756 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
SMG6-207ENST00000570756 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
SMG6-207ENST00000570756 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
SMG6-207ENST00000570756 INE1O15225 51 aa6.33□□□□□ -1.4
SMG6-207ENST00000570756 MT1HP80294 61 aa6.33□□□□□ -1.4
SMG6-207ENST00000570756 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
SMG6-207ENST00000570756 M0R2T5 61 aa6.27□□□□□ -1.41
SMG6-207ENST00000570756 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
SMG6-207ENST00000570756 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
SMG6-207ENST00000570756 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
SMG6-207ENST00000570756 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
SMG6-207ENST00000570756 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
SMG6-207ENST00000570756 MT2AP02795 61 aa6.03□□□□□ -1.44
SMG6-207ENST00000570756 MT1FP04733 61 aa6.01□□□□□ -1.45
SMG6-207ENST00000570756 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
SMG6-207ENST00000570756 KRTAP10-12P60413 245 aa6□□□□□ -1.45
SMG6-207ENST00000570756 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
SMG6-207ENST00000570756 MT1XP80297 61 aa5.95□□□□□ -1.46
SMG6-207ENST00000570756 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
SMG6-207ENST00000570756 MT1BP07438 61 aa5.89□□□□□ -1.47
SMG6-207ENST00000570756 USH2AO75445 5202 aa5.88□□□□□ -1.47
SMG6-207ENST00000570756 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
SMG6-207ENST00000570756 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
SMG6-207ENST00000570756 LCE2BO14633 110 aa5.77□□□□□ -1.49
SMG6-207ENST00000570756 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
SMG6-207ENST00000570756 KRTAP9-2Q9BYQ4 174 aa5.68□□□□□ -1.5
SMG6-207ENST00000570756 SSPOA2VEC9 5147 aa5.67□□□□□ -1.5
SMG6-207ENST00000570756 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.51
SMG6-207ENST00000570756 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
SMG6-207ENST00000570756 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
SMG6-207ENST00000570756 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
SMG6-207ENST00000570756 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
SMG6-207ENST00000570756 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
SMG6-207ENST00000570756 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
SMG6-207ENST00000570756 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
SMG6-207ENST00000570756 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
SMG6-207ENST00000570756 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
SMG6-207ENST00000570756 KMT2DO14686 5537 aa5.34□□□□□ -1.55
SMG6-207ENST00000570756 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms