RNA–Protein interactions for RNA: ENST00000569936.5

STRA6-210, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 1 (best)

Gene STRA6, Length 2,151 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-210ENST00000569936 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
STRA6-210ENST00000569936 TNXBP22105 4242 aa8.07□□□□□ -1.12
STRA6-210ENST00000569936 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
STRA6-210ENST00000569936 ABCA13Q86UQ4 5058 aa8.02□□□□□ -1.12
STRA6-210ENST00000569936 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
STRA6-210ENST00000569936 A8MUU9 505 aa7.97□□□□□ -1.13
STRA6-210ENST00000569936 J3QL48 77 aa7.97□□□□□ -1.13
STRA6-210ENST00000569936 H0YAA0 97 aa7.96□□□□□ -1.14
STRA6-210ENST00000569936 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.15
STRA6-210ENST00000569936 H3BS24 57 aa7.89□□□□□ -1.15
STRA6-210ENST00000569936 A0A1B0GU33 70 aa7.87□□□□□ -1.15
STRA6-210ENST00000569936 H1FX-AS1Q4G0G2 97 aa7.86□□□□□ -1.15
STRA6-210ENST00000569936 PCLOQ9Y6V0 5065 aa7.85□□□□□ -1.15
STRA6-210ENST00000569936 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
STRA6-210ENST00000569936 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
STRA6-210ENST00000569936 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
STRA6-210ENST00000569936 ROMO1P60602 79 aa7.75□□□□□ -1.17
STRA6-210ENST00000569936 K7ERS5 55 aa7.71□□□□□ -1.17
STRA6-210ENST00000569936 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
STRA6-210ENST00000569936 COX6B2Q6YFQ2 88 aa7.67□□□□□ -1.18
STRA6-210ENST00000569936 XP32Q5T750 250 aa7.64□□□□□ -1.19
STRA6-210ENST00000569936 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
STRA6-210ENST00000569936 HERC1Q15751 4861 aa7.57□□□□□ -1.2
STRA6-210ENST00000569936 LPAP08519 4548 aa7.56□□□□□ -1.2
STRA6-210ENST00000569936 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
STRA6-210ENST00000569936 KRTAP10-6P60371 365 aaPredicted RBP7.52□□□□□ -1.21
STRA6-210ENST00000569936 P0C880 135 aa7.51□□□□□ -1.21
STRA6-210ENST00000569936 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
STRA6-210ENST00000569936 LRP2P98164 4655 aa7.46□□□□□ -1.21
STRA6-210ENST00000569936 HMCN2Q8NDA2 5059 aa7.45□□□□□ -1.22
STRA6-210ENST00000569936 KRTAP13-4Q3LI77 160 aa7.45□□□□□ -1.22
STRA6-210ENST00000569936 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
STRA6-210ENST00000569936 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
STRA6-210ENST00000569936 A0A0D9SG42 100 aa7.37□□□□□ -1.23
STRA6-210ENST00000569936 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
STRA6-210ENST00000569936 S4R3F8 94 aa7.35□□□□□ -1.23
STRA6-210ENST00000569936 MUC17Q685J3 4493 aa7.29□□□□□ -1.24
STRA6-210ENST00000569936 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
STRA6-210ENST00000569936 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
STRA6-210ENST00000569936 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
STRA6-210ENST00000569936 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
STRA6-210ENST00000569936 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
STRA6-210ENST00000569936 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
STRA6-210ENST00000569936 NDUFAF8A1L188 74 aa7.15□□□□□ -1.27
STRA6-210ENST00000569936 MUC2Q02817 5179 aa7.11□□□□□ -1.27
STRA6-210ENST00000569936 M0QZ58 72 aa7.1□□□□□ -1.27
STRA6-210ENST00000569936 RNF213Q63HN8 5207 aa7.09□□□□□ -1.27
STRA6-210ENST00000569936 KRTAP19-2Q3LHN2 52 aa7.01□□□□□ -1.29
STRA6-210ENST00000569936 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
STRA6-210ENST00000569936 FLGP20930 4061 aaPredicted RBP6.85□□□□□ -1.31
STRA6-210ENST00000569936 FAT4Q6V0I7 4981 aa6.82□□□□□ -1.32
STRA6-210ENST00000569936 MT1HP80294 61 aa6.81□□□□□ -1.32
STRA6-210ENST00000569936 R4GN34 69 aa6.8□□□□□ -1.32
STRA6-210ENST00000569936 M0R2T5 61 aa6.79□□□□□ -1.32
STRA6-210ENST00000569936 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
STRA6-210ENST00000569936 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
STRA6-210ENST00000569936 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
STRA6-210ENST00000569936 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
STRA6-210ENST00000569936 LUZP6Q538Z0 58 aa6.54□□□□□ -1.36
STRA6-210ENST00000569936 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
STRA6-210ENST00000569936 MT2AP02795 61 aa6.51□□□□□ -1.37
STRA6-210ENST00000569936 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
STRA6-210ENST00000569936 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
STRA6-210ENST00000569936 MT1FP04733 61 aa6.47□□□□□ -1.37
STRA6-210ENST00000569936 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
STRA6-210ENST00000569936 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
STRA6-210ENST00000569936 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
STRA6-210ENST00000569936 TNP1P09430 55 aa6.33□□□□□ -1.4
STRA6-210ENST00000569936 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
STRA6-210ENST00000569936 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
STRA6-210ENST00000569936 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
STRA6-210ENST00000569936 LCE2BO14633 110 aa6.16□□□□□ -1.42
STRA6-210ENST00000569936 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.43
STRA6-210ENST00000569936 MT1BP07438 61 aa6.08□□□□□ -1.44
STRA6-210ENST00000569936 LCE2DQ5TA82 110 aaPredicted RBP6.07□□□□□ -1.44
STRA6-210ENST00000569936 USH2AO75445 5202 aa5.99□□□□□ -1.45
STRA6-210ENST00000569936 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
STRA6-210ENST00000569936 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
STRA6-210ENST00000569936 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
STRA6-210ENST00000569936 KRTAP9-6A0A140TA67 174 aa5.9□□□□□ -1.47
STRA6-210ENST00000569936 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
STRA6-210ENST00000569936 MT1XP80297 61 aa5.86□□□□□ -1.47
STRA6-210ENST00000569936 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
STRA6-210ENST00000569936 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
STRA6-210ENST00000569936 INE1O15225 51 aa5.84□□□□□ -1.47
STRA6-210ENST00000569936 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
STRA6-210ENST00000569936 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
STRA6-210ENST00000569936 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
STRA6-210ENST00000569936 KRTAP12-3P60328 96 aa5.65□□□□□ -1.5
STRA6-210ENST00000569936 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
STRA6-210ENST00000569936 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
STRA6-210ENST00000569936 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
STRA6-210ENST00000569936 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
STRA6-210ENST00000569936 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
STRA6-210ENST00000569936 KMT2DO14686 5537 aa5.43□□□□□ -1.54
STRA6-210ENST00000569936 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
STRA6-210ENST00000569936 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
STRA6-210ENST00000569936 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
STRA6-210ENST00000569936 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
STRA6-210ENST00000569936 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms