RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
SPG7-222ENST00000569820 A0A1B0GU33 70 aa6.51□□□□□ -1.37
SPG7-222ENST00000569820 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
SPG7-222ENST00000569820 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
SPG7-222ENST00000569820 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
SPG7-222ENST00000569820 EPPK1P58107 5090 aaKnown RBP6.48□□□□□ -1.37
SPG7-222ENST00000569820 TNXBP22105 4242 aa6.48□□□□□ -1.37
SPG7-222ENST00000569820 K7ERS5 55 aa6.48□□□□□ -1.37
SPG7-222ENST00000569820 FLG2Q5D862 2391 aaPredicted RBP6.47□□□□□ -1.37
SPG7-222ENST00000569820 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
SPG7-222ENST00000569820 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
SPG7-222ENST00000569820 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
SPG7-222ENST00000569820 FAT3Q8TDW7 4589 aa6.43□□□□□ -1.38
SPG7-222ENST00000569820 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
SPG7-222ENST00000569820 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
SPG7-222ENST00000569820 MT1HL1P0DM35 61 aa6.37□□□□□ -1.39
SPG7-222ENST00000569820 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
SPG7-222ENST00000569820 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
SPG7-222ENST00000569820 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
SPG7-222ENST00000569820 LUZP6Q538Z0 58 aa6.32□□□□□ -1.4
SPG7-222ENST00000569820 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
SPG7-222ENST00000569820 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
SPG7-222ENST00000569820 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
SPG7-222ENST00000569820 XP32Q5T750 250 aa6.19□□□□□ -1.42
SPG7-222ENST00000569820 A0A0D9SG42 100 aa6.16□□□□□ -1.42
SPG7-222ENST00000569820 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
SPG7-222ENST00000569820 ABCA13Q86UQ4 5058 aa6.15□□□□□ -1.42
SPG7-222ENST00000569820 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
SPG7-222ENST00000569820 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
SPG7-222ENST00000569820 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
SPG7-222ENST00000569820 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
SPG7-222ENST00000569820 HERC2O95714 4834 aa6.12□□□□□ -1.43
SPG7-222ENST00000569820 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
SPG7-222ENST00000569820 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
SPG7-222ENST00000569820 J3QL48 77 aa6.04□□□□□ -1.44
SPG7-222ENST00000569820 LPAP08519 4548 aa6.04□□□□□ -1.44
SPG7-222ENST00000569820 S4R3F8 94 aa6.03□□□□□ -1.44
SPG7-222ENST00000569820 LRP2P98164 4655 aa6.03□□□□□ -1.44
SPG7-222ENST00000569820 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
SPG7-222ENST00000569820 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
SPG7-222ENST00000569820 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
SPG7-222ENST00000569820 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
SPG7-222ENST00000569820 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
SPG7-222ENST00000569820 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
SPG7-222ENST00000569820 HERC1Q15751 4861 aa5.79□□□□□ -1.48
SPG7-222ENST00000569820 M0QZ58 72 aa5.79□□□□□ -1.48
SPG7-222ENST00000569820 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
SPG7-222ENST00000569820 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
SPG7-222ENST00000569820 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
SPG7-222ENST00000569820 MUC2Q02817 5179 aa5.62□□□□□ -1.51
SPG7-222ENST00000569820 R4GN34 69 aa5.58□□□□□ -1.52
SPG7-222ENST00000569820 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
SPG7-222ENST00000569820 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
SPG7-222ENST00000569820 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
SPG7-222ENST00000569820 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
SPG7-222ENST00000569820 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
SPG7-222ENST00000569820 RNF213Q63HN8 5207 aa5.44□□□□□ -1.54
SPG7-222ENST00000569820 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
SPG7-222ENST00000569820 FAT4Q6V0I7 4981 aa5.39□□□□□ -1.55
SPG7-222ENST00000569820 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
SPG7-222ENST00000569820 MT1HP80294 61 aa5.35□□□□□ -1.55
SPG7-222ENST00000569820 INE1O15225 51 aa5.32□□□□□ -1.56
SPG7-222ENST00000569820 LCE2DQ5TA82 110 aaPredicted RBP5.29□□□□□ -1.56
SPG7-222ENST00000569820 M0R2T5 61 aa5.26□□□□□ -1.57
SPG7-222ENST00000569820 TNP1P09430 55 aa5.19□□□□□ -1.58
SPG7-222ENST00000569820 MT2AP02795 61 aa5.18□□□□□ -1.58
SPG7-222ENST00000569820 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
SPG7-222ENST00000569820 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
SPG7-222ENST00000569820 MT1FP04733 61 aa5.16□□□□□ -1.58
SPG7-222ENST00000569820 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
SPG7-222ENST00000569820 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
SPG7-222ENST00000569820 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
SPG7-222ENST00000569820 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
SPG7-222ENST00000569820 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
SPG7-222ENST00000569820 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
SPG7-222ENST00000569820 MT1BP07438 61 aa4.92□□□□□ -1.62
SPG7-222ENST00000569820 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
SPG7-222ENST00000569820 LCE2BO14633 110 aa4.83□□□□□ -1.64
SPG7-222ENST00000569820 MT1XP80297 61 aa4.8□□□□□ -1.64
SPG7-222ENST00000569820 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
SPG7-222ENST00000569820 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
SPG7-222ENST00000569820 USH2AO75445 5202 aa4.65□□□□□ -1.66
SPG7-222ENST00000569820 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
SPG7-222ENST00000569820 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
SPG7-222ENST00000569820 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
SPG7-222ENST00000569820 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
SPG7-222ENST00000569820 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
SPG7-222ENST00000569820 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.69
SPG7-222ENST00000569820 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
SPG7-222ENST00000569820 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.7
SPG7-222ENST00000569820 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.7
SPG7-222ENST00000569820 KMT2DO14686 5537 aa4.38□□□□□ -1.71
SPG7-222ENST00000569820 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
SPG7-222ENST00000569820 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
SPG7-222ENST00000569820 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
SPG7-222ENST00000569820 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
SPG7-222ENST00000569820 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
SPG7-222ENST00000569820 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SPG7-222ENST00000569820 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
SPG7-222ENST00000569820 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms