RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 KRTAP19-8Q3LI54 63 aa13.21□□□□□ -0.29
RAB40C-211ENST00000568586 MT1BP07438 61 aa13.2□□□□□ -0.3
RAB40C-211ENST00000568586 KLKP1Q107X0 134 aa13.19□□□□□ -0.3
RAB40C-211ENST00000568586 A0A1B0GV90 55 aa13.14□□□□□ -0.31
RAB40C-211ENST00000568586 Q5VV11 94 aa13.13□□□□□ -0.31
RAB40C-211ENST00000568586 OCR1Q9BZK8 76 aa13.07□□□□□ -0.32
RAB40C-211ENST00000568586 CRIPTQ9P021 101 aa13.06□□□□□ -0.32
RAB40C-211ENST00000568586 A8MUN3 132 aa13.05□□□□□ -0.32
RAB40C-211ENST00000568586 IMUPQ9GZP8 106 aa13.03□□□□□ -0.32
RAB40C-211ENST00000568586 NDUFC1O43677 76 aa13.02□□□□□ -0.33
RAB40C-211ENST00000568586 LINC00208Q96KT6 92 aa13.02□□□□□ -0.33
RAB40C-211ENST00000568586 H0YAA0 97 aa13.01□□□□□ -0.33
RAB40C-211ENST00000568586 KRTAP6-3Q3LI67 103 aa13□□□□□ -0.33
RAB40C-211ENST00000568586 A6NN06 94 aa12.98□□□□□ -0.33
RAB40C-211ENST00000568586 MP68P56378 58 aa12.95□□□□□ -0.34
RAB40C-211ENST00000568586 J3QR89 54 aa12.9□□□□□ -0.34
RAB40C-211ENST00000568586 KRTAP10-5P60370 271 aa12.9□□□□□ -0.34
RAB40C-211ENST00000568586 H3BPC8 53 aa12.83□□□□□ -0.36
RAB40C-211ENST00000568586 ADM2Q7Z4H4 148 aa12.75□□□□□ -0.37
RAB40C-211ENST00000568586 SCGB1A1P11684 91 aa12.68□□□□□ -0.38
RAB40C-211ENST00000568586 DMAC1Q96GE9 116 aa12.67□□□□□ -0.38
RAB40C-211ENST00000568586 NEBP20929 6669 aa12.54□□□□□ -0.4
RAB40C-211ENST00000568586 MUC12Q9UKN1 5478 aa12.5□□□□□ -0.41
RAB40C-211ENST00000568586 P0C880 135 aa12.49□□□□□ -0.41
RAB40C-211ENST00000568586 C20orf197Q8N268 126 aa12.47□□□□□ -0.41
RAB40C-211ENST00000568586 MT-ATP8P03928 68 aa12.46□□□□□ -0.41
RAB40C-211ENST00000568586 KRTAP5-9P26371 169 aa12.44□□□□□ -0.42
RAB40C-211ENST00000568586 KRTAP3-2Q9BYR7 98 aa12.44□□□□□ -0.42
RAB40C-211ENST00000568586 R4GN34 69 aa12.43□□□□□ -0.42
RAB40C-211ENST00000568586 SMIM20Q8N5G0 67 aa12.42□□□□□ -0.42
RAB40C-211ENST00000568586 TRAV7A0A075B6U4 112 aa12.41□□□□□ -0.42
RAB40C-211ENST00000568586 K7ERU9 68 aa12.41□□□□□ -0.42
RAB40C-211ENST00000568586 MT1XP80297 61 aa12.37□□□□□ -0.43
RAB40C-211ENST00000568586 PLAC4Q8WY50 150 aa12.36□□□□□ -0.43
RAB40C-211ENST00000568586 PRO2289Q9P1D8 64 aa12.36□□□□□ -0.43
RAB40C-211ENST00000568586 ACYP2P14621 99 aa12.33□□□□□ -0.44
RAB40C-211ENST00000568586 KMT2DO14686 5537 aa12.33□□□□□ -0.44
RAB40C-211ENST00000568586 M0QZ58 72 aa12.31□□□□□ -0.44
RAB40C-211ENST00000568586 MDN1Q9NU22 5596 aa12.22□□□□□ -0.45
RAB40C-211ENST00000568586 SPTSSBQ8NFR3 76 aa12.17□□□□□ -0.46
RAB40C-211ENST00000568586 KRTAP12-2P59991 146 aa12.12□□□□□ -0.47
RAB40C-211ENST00000568586 LINC01554Q52M75 96 aa12.09□□□□□ -0.47
RAB40C-211ENST00000568586 SNURFQ9Y675 71 aa12.09□□□□□ -0.47
RAB40C-211ENST00000568586 SPANXA2-OT1Q8N9U9 137 aa12.04□□□□□ -0.48
RAB40C-211ENST00000568586 CHKB-CPT1BH3BT56 60 aa12.02□□□□□ -0.49
RAB40C-211ENST00000568586 KRTAP20-1Q3LI63 56 aa11.97□□□□□ -0.49
RAB40C-211ENST00000568586 SERP2Q8N6R1 65 aa11.97□□□□□ -0.49
RAB40C-211ENST00000568586 SPRR2FQ96RM1 72 aa11.96□□□□□ -0.49
RAB40C-211ENST00000568586 KRTAP8-1Q8IUC2 63 aa11.93□□□□□ -0.5
RAB40C-211ENST00000568586 KRTAP4-8A0A0G2JLE6 195 aa11.8□□□□□ -0.52
RAB40C-211ENST00000568586 KRTAP4-8Q9BYQ9 185 aa11.8□□□□□ -0.52
RAB40C-211ENST00000568586 KRTAP10-12P60413 245 aa11.78□□□□□ -0.52
RAB40C-211ENST00000568586 SPRR2EP22531 72 aa11.77□□□□□ -0.53
RAB40C-211ENST00000568586 SPRR2BP35325 72 aa11.77□□□□□ -0.53
RAB40C-211ENST00000568586 SPRR2AP35326 72 aa11.77□□□□□ -0.53
RAB40C-211ENST00000568586 KRTAP10-7P60409 375 aaPredicted RBP11.77□□□□□ -0.53
RAB40C-211ENST00000568586 KRTAP2-3P0C7H8 128 aa11.7□□□□□ -0.54
RAB40C-211ENST00000568586 LCE1AQ5T7P2 110 aa11.7□□□□□ -0.54
RAB40C-211ENST00000568586 KRTAP2-4Q9BYR9 128 aa11.7□□□□□ -0.54
RAB40C-211ENST00000568586 KRTAP13-4Q3LI77 160 aa11.68□□□□□ -0.54
RAB40C-211ENST00000568586 COA5Q86WW8 74 aa11.63□□□□□ -0.55
RAB40C-211ENST00000568586 COX7CP15954 63 aa11.58□□□□□ -0.56
RAB40C-211ENST00000568586 H7BZZ5 65 aa11.44□□□□□ -0.58
RAB40C-211ENST00000568586 SEC61GP60059 68 aa11.4□□□□□ -0.58
RAB40C-211ENST00000568586 CYSTM1Q9H1C7 97 aa11.4□□□□□ -0.58
RAB40C-211ENST00000568586 CAMK2N1Q7Z7J9 78 aa11.39□□□□□ -0.59
RAB40C-211ENST00000568586 SERP1Q9Y6X1 66 aa11.39□□□□□ -0.59
RAB40C-211ENST00000568586 SPRR2DP22532 72 aa11.38□□□□□ -0.59
RAB40C-211ENST00000568586 KRTAP2-2Q9BYT5 123 aa11.33□□□□□ -0.6
RAB40C-211ENST00000568586 KRTAP2-1Q9BYU5 128 aa11.33□□□□□ -0.6
RAB40C-211ENST00000568586 A0A1B0GU33 70 aa11.25□□□□□ -0.61
RAB40C-211ENST00000568586 SPATA8Q6RVD6 105 aa11.24□□□□□ -0.61
RAB40C-211ENST00000568586 A0A0D9SG42 100 aa11.23□□□□□ -0.61
RAB40C-211ENST00000568586 KRTAP12-1P59990 96 aa11.1□□□□□ -0.63
RAB40C-211ENST00000568586 LCE3BQ5TA77 95 aa11.1□□□□□ -0.63
RAB40C-211ENST00000568586 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
RAB40C-211ENST00000568586 KRTAP19-7Q3SYF9 63 aa11.07□□□□□ -0.64
RAB40C-211ENST00000568586 SPINT4Q6UDR6 99 aa11.07□□□□□ -0.64
RAB40C-211ENST00000568586 A0A1B0GU69 56 aa11.01□□□□□ -0.65
RAB40C-211ENST00000568586 MT1EP04732 61 aa10.97□□□□□ -0.65
RAB40C-211ENST00000568586 SMIM26A0A096LP01 95 aa10.94□□□□□ -0.66
RAB40C-211ENST00000568586 LCE5AQ5TCM9 118 aa10.93□□□□□ -0.66
RAB40C-211ENST00000568586 CCDC179H3BU77 68 aa10.9□□□□□ -0.66
RAB40C-211ENST00000568586 KRTAP19-3Q7Z4W3 81 aa10.86□□□□□ -0.67
RAB40C-211ENST00000568586 A8MU10 97 aa10.82□□□□□ -0.68
RAB40C-211ENST00000568586 ATP5EP56381 51 aaPredicted RBP10.82□□□□□ -0.68
RAB40C-211ENST00000568586 DSTQ03001 7570 aaKnown RBP10.74□□□□□ -0.69
RAB40C-211ENST00000568586 KRTAP19-5Q3LI72 72 aa10.74□□□□□ -0.69
RAB40C-211ENST00000568586 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
RAB40C-211ENST00000568586 MT1GP13640 62 aa10.64□□□□□ -0.71
RAB40C-211ENST00000568586 LINC01558Q9Y6Z2 57 aa10.64□□□□□ -0.71
RAB40C-211ENST00000568586 C10orf95Q9H7T3 257 aa10.62□□□□□ -0.71
RAB40C-211ENST00000568586 TNP1P09430 55 aa10.55□□□□□ -0.72
RAB40C-211ENST00000568586 TMEM258P61165 79 aa10.51□□□□□ -0.73
RAB40C-211ENST00000568586 LCE3AQ5TA76 89 aa10.49□□□□□ -0.73
RAB40C-211ENST00000568586 PP632Q6XCG6 107 aa10.49□□□□□ -0.73
RAB40C-211ENST00000568586 MT1LQ93083 61 aa10.48□□□□□ -0.73
RAB40C-211ENST00000568586 MT1MQ8N339 61 aa10.42□□□□□ -0.74
RAB40C-211ENST00000568586 UQCR11O14957 56 aa10.36□□□□□ -0.75
RAB40C-211ENST00000568586 KRTAP4-9Q9BYQ8 210 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms